SPAC22E12.03c | glyoxylase III sdj1

_IDPredictionOTHERSPmTPCS_Position
SPAC22E12.03cOTHER0.9988250.0011180.000057
No Results

  • Fasta :-

    >SPAC22E12.03c MVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKE IPSADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKTS GLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQVASKDK YNAVYKSLSMP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/494 Sequence name : 494 Sequence length : 191 VALUES OF COMPUTED PARAMETERS Coef20 : 3.669 CoefTot : 0.150 ChDiff : 1 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 0.924 0.137 0.462 MesoH : -0.598 -0.042 -0.439 0.162 MuHd_075 : 14.225 6.715 3.568 3.096 MuHd_095 : 19.867 10.130 6.037 2.562 MuHd_100 : 29.889 15.241 9.053 4.019 MuHd_105 : 36.687 18.901 11.115 5.181 Hmax_075 : 8.925 10.267 1.625 4.314 Hmax_095 : 6.700 13.100 1.830 4.490 Hmax_100 : 17.000 16.400 4.432 5.740 Hmax_105 : 16.500 18.400 4.539 5.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8971 0.1029 DFMC : 0.8476 0.1524
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 191 SPAC22E12.03c MVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGGG 80 LGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQG 160 PGTAMLFGLKLLEQVASKDKYNAVYKSLSMP 240 ................................................................................ 80 ................................................................................ 160 ............................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC22E12.03c 3 ----MVK|VC 0.056 . SPAC22E12.03c 25 APWGIFK|RA 0.073 . SPAC22E12.03c 26 PWGIFKR|AE 0.179 . SPAC22E12.03c 40 VYVGENK|DR 0.057 . SPAC22E12.03c 42 VGENKDR|LV 0.125 . SPAC22E12.03c 45 NKDRLVK|MS 0.148 . SPAC22E12.03c 48 RLVKMSR|DV 0.181 . SPAC22E12.03c 56 VEMYANR|SY 0.121 . SPAC22E12.03c 59 YANRSYK|EI 0.182 . SPAC22E12.03c 69 SADDFAK|QY 0.080 . SPAC22E12.03c 84 GGGLGAK|TL 0.068 . SPAC22E12.03c 97 FVQQVVK|EF 0.064 . SPAC22E12.03c 101 VVKEFYK|KP 0.062 . SPAC22E12.03c 102 VKEFYKK|PN 0.112 . SPAC22E12.03c 105 FYKKPNK|WI 0.071 . SPAC22E12.03c 118 AGTLTAK|TS 0.064 . SPAC22E12.03c 125 TSGLPNK|QI 0.082 . SPAC22E12.03c 134 TGHPSVR|GQ 0.105 . SPAC22E12.03c 143 LEEGGYK|YL 0.062 . SPAC22E12.03c 170 AMLFGLK|LL 0.057 . SPAC22E12.03c 178 LEQVASK|DK 0.068 . SPAC22E12.03c 180 QVASKDK|YN 0.063 . SPAC22E12.03c 186 KYNAVYK|SL 0.096 . ____________________________^_________________

  • Fasta :-

    >SPAC22E12.03c TGCCTTTCCATGCCTATATATATGGAATCATACGTCAACCTATTACTTTCCAACTACCAA ACACTTGTGAAGCGAGAAATTTCTTTGACAACGAGTTTTACTTGGTTTTGTACTAAATTT TTGAACCCTGCTAGTGTCTTAAAAAAATTTGAAAATGGTAAAGGTTTGCCTATTTGTTGC GGACGGCACTGATGAAATTGAGTTTTCGGCACCTTGGGGAATTTTTAAGAGAGCAGAAAT TCCCATTGACAGCGTCTACGTTGGAGAGAATAAGGACCGACTTGTGAAGATGTCTCGTGA CGTGGAAATGTATGCAAATCGTTCATACAAGGAAATCCCCAGTGCAGATGACTTTGCAAA GCAATACGATATTGCTATCATTCCTGGTGGTGGACTCGGGGCAAAAACACTTTCTACAAC TCCTTTTGTTCAACAAGTGGTTAAAGAATTTTACAAGAAGCCTAATAAATGGATTGGAAT GATTTGTGCCGGTACCCTTACAGCCAAGACATCAGGTCTTCCAAATAAACAGATTACTGG TCATCCTTCTGTTCGTGGTCAACTAGAGGAAGGTGGCTACAAGTACCTTGACCAACCTGT CGTCCTTGAAGAGAATCTTATCACATCTCAAGGACCCGGTACTGCAATGCTTTTTGGTTT AAAATTATTGGAGCAGGTTGCAAGCAAGGACAAGTATAATGCTGTCTATAAATCTCTTAG TATGCCCTAGACTACACACGACGAAACGAACTCGCCCTTGAATAGTCTCGAGATGCTTTG GTTTGATTTCTAGAAGCCTCGGACTCGGTAGCACGGGCGGCACTGATTTCTGTATTAACG GCGTTTGGGACTGATGTGGAATTTGCCGGTCTCGCACCTGTTATACTAGATGATGATATT AGCTCCGCAGCTGCCGATTGTGCCGCCCGCGATGATTTTGATGAATTTTTACCATGCTTA TTTTTTATTTTCTTTTGAACACGGTTCCCGTGATGAATAGTTCGAGAGTAAAGTGAATTC CGT
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  • Fasta :-

    MVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKE IPSADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKTS GLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQVASKDK YNAVYKSLSMP

  • title: conserved cys residue
  • coordinates: C111
No Results
No Results
IDSitePeptideScoreMethod
SPAC22E12.03c57 SYANRSYKEI0.997unsp

SPAC22E12.03c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India