SPAC22F8.06 | 20S proteasome complex subunit beta 6

_IDPredictionOTHERSPmTPCS_Position
SPAC22F8.06OTHER0.9999840.0000110.000005
No Results

  • Fasta :-

    >SPAC22F8.06 MSQSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASG FEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKE GKGEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRLLKL EEAMKITTDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/97 Sequence name : 97 Sequence length : 225 VALUES OF COMPUTED PARAMETERS Coef20 : 3.480 CoefTot : -1.491 ChDiff : 0 ZoneTo : 21 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.171 1.306 0.183 0.593 MesoH : -0.962 0.015 -0.432 0.132 MuHd_075 : 17.993 11.017 5.273 3.568 MuHd_095 : 18.134 16.709 5.434 5.161 MuHd_100 : 13.999 14.711 4.854 4.595 MuHd_105 : 13.046 15.619 4.814 4.250 Hmax_075 : 9.100 8.700 0.602 3.827 Hmax_095 : 10.850 8.838 1.707 4.428 Hmax_100 : 13.500 11.800 2.616 5.460 Hmax_105 : 14.817 13.883 2.582 5.192 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9703 0.0297 DFMC : 0.9845 0.0155
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 225 SPAC22F8.06 MSQSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRIDLYH 80 DNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLH 160 NQYVPGSHGKERKPRRLLKLEEAMKITTDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD 240 ................................................................................ 80 ................................................................................ 160 ................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC22F8.06 32 ILAGDTR|SV 0.178 . SPAC22F8.06 42 GYNINTR|FQ 0.095 . SPAC22F8.06 46 NTRFQPR|VH 0.106 . SPAC22F8.06 70 DALALVK|RI 0.059 . SPAC22F8.06 71 ALALVKR|IQ 0.158 . SPAC22F8.06 75 VKRIQQR|ID 0.092 . SPAC22F8.06 85 YHDNHER|KM 0.085 . SPAC22F8.06 86 HDNHERK|MS 0.115 . SPAC22F8.06 97 SCACMVR|TL 0.086 . SPAC22F8.06 103 RTLLYGK|RF 0.058 . SPAC22F8.06 104 TLLYGKR|FF 0.159 . SPAC22F8.06 119 TVAGIDK|EG 0.060 . SPAC22F8.06 122 GIDKEGK|GE 0.063 . SPAC22F8.06 136 PVGSYER|EW 0.084 . SPAC22F8.06 140 YEREWCR|AG 0.100 . SPAC22F8.06 170 VPGSHGK|ER 0.061 . SPAC22F8.06 172 GSHGKER|KP 0.112 . SPAC22F8.06 173 SHGKERK|PR 0.079 . SPAC22F8.06 175 GKERKPR|RL 0.397 . SPAC22F8.06 176 KERKPRR|LL 0.197 . SPAC22F8.06 179 KPRRLLK|LE 0.160 . SPAC22F8.06 185 KLEEAMK|IT 0.069 . SPAC22F8.06 197 FTSAGER|HI 0.108 . SPAC22F8.06 208 GDSVLVK|II 0.088 . SPAC22F8.06 212 LVKIITK|EG 0.052 . SPAC22F8.06 218 KEGVETR|II 0.090 . SPAC22F8.06 223 TRIIPLK|KD 0.071 . SPAC22F8.06 224 RIIPLKK|D- 0.143 . ____________________________^_________________

  • Fasta :-

    >SPAC22F8.06 ATTTTTGGGGGACAATTATGAATAACGTATTCACTGCTATAGTACAAGTACTTAGGTAAC ATAAGCATATCCAACTCACCAACTACTAAGCACCAAAAAGGTTTGTTGAGACAATAAATA GTGCTCTAGCAAACTAGAAATTAATAATTCGCTTCATCTTTTAAACTTTTTAAGAAAAAA ATAAATTAAACGTCACAAAAATCATGTCACAGTCTCAGTTTGATCCTTATGTACAAAATG GTGGTACCACTGTTGCAATCGCTGGCGATGGGTTTGCCATTTTAGCTGGAGATACAAGAA GTGTTAATGGTTACAACATTAATACGCGGTTTCAACCTCGCGTGCATGAAGTCGGTGATG ATTTGGTCATTGGAGCATCTGGTTTCGAAGCCGATGCCCTAGCTTTAGTTAAGAGAATTC AACAAAGAATTGACTTGTATCATGATAATCATGAACGCAAGATGAGTGCACAATCCTGTG CTTGCATGGTACGGACACTTTTGTACGGAAAGAGATTTTTTCCCTATTATGTATATACAA CCGTTGCCGGCATCGATAAAGAGGGAAAAGGAGAGATTTATTCTTTTGATCCTGTTGGCT CTTATGAGCGGGAATGGTGCCGTGCTGGTGGATCCGCTGCAAACTTCATTACTCCATTCC TCGACAATCAAGTGAACTTACATAATCAGTACGTTCCTGGTTCACATGGAAAAGAGAGAA AGCCAAGGAGACTTTTAAAATTGGAGGAAGCTATGAAGATTACTACTGATGCATTTACAA GTGCTGGAGAACGACACATCGAGGTTGGTGATTCAGTTCTTGTTAAGATTATCACAAAAG AAGGTGTAGAGACAAGAATTATTCCTTTGAAGAAGGATTAGATTTTTGTAAATATGACTT TTTTATGTTCCACTGTCACAGATATAGCTTCCTAGAATGGCAGCCTGCCTGTCAAGCTCA ATTCCAATTTCGGATTGCATGATTATGTATGAGATTTTATCGGAGATATCCCTATTTTGA AAAGCCTAGTCTCAATTTATTTTACAAGTTAAACATTTTTTTTTGTCTTTGAT
  • Download Fasta

  • Fasta :-

    MSQSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASG FEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKE GKGEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRLLKL EEAMKITTDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD

  • title: active site
  • coordinates: G14,D30,R32,R46,S144,H198,V201,G202
No Results
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SPAC22F8.06      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India