SPAC22H12.03 | mitochondrial hydrolase (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC22H12.03OTHER0.9658400.0005180.033643
No Results

  • Fasta :-

    >SPAC22H12.03 MSLKPVKLAFEKYSATVAKHPPVLIFHGLLGSKRNWRSLAKKFSCKLDRDIYAIDQRCHG DSPCVAPLSYSAMALDAFQFMKDHKLDKASIIGHSMGAKTAMVTALKWPDKVEKLVVVDN SPWYQDLPRDYGAYFRKMIQIDEANITKYSEADKMMSTVEKDILVRSFLLSNLKKDSNNS NTFKFRVPIELISKSLKTIEGFPASLNDLVYDSPTLVIRALKAPFIPDSALPVFKKFFPK YELVSLDCGHWVHFEKPKEFSESIINFLNN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/820 Sequence name : 820 Sequence length : 270 VALUES OF COMPUTED PARAMETERS Coef20 : 3.893 CoefTot : -0.917 ChDiff : 9 ZoneTo : 47 KR : 10 DE : 1 CleavSite : 47 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.000 1.029 0.086 0.482 MesoH : -0.764 0.300 -0.453 0.211 MuHd_075 : 30.989 25.581 9.899 8.297 MuHd_095 : 38.492 20.523 11.585 8.761 MuHd_100 : 37.586 20.946 9.783 8.582 MuHd_105 : 36.778 21.606 9.275 8.435 Hmax_075 : 6.000 12.367 1.372 2.914 Hmax_095 : 14.000 14.700 2.254 4.470 Hmax_100 : 14.400 11.800 2.254 5.130 Hmax_105 : 17.383 8.225 1.925 3.806 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0216 0.9784 DFMC : 0.0312 0.9688 This protein is probably imported in mitochondria. f(Ser) = 0.1064 f(Arg) = 0.0426 CMi = 0.82102 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 270 SPAC22H12.03 MSLKPVKLAFEKYSATVAKHPPVLIFHGLLGSKRNWRSLAKKFSCKLDRDIYAIDQRCHGDSPCVAPLSYSAMALDAFQF 80 MKDHKLDKASIIGHSMGAKTAMVTALKWPDKVEKLVVVDNSPWYQDLPRDYGAYFRKMIQIDEANITKYSEADKMMSTVE 160 KDILVRSFLLSNLKKDSNNSNTFKFRVPIELISKSLKTIEGFPASLNDLVYDSPTLVIRALKAPFIPDSALPVFKKFFPK 240 YELVSLDCGHWVHFEKPKEFSESIINFLNN 320 ....................................P........................................... 80 ................................................................................ 160 ................................................................................ 240 .............................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPAC22H12.03 4 ---MSLK|PV 0.069 . SPAC22H12.03 7 MSLKPVK|LA 0.068 . SPAC22H12.03 12 VKLAFEK|YS 0.067 . SPAC22H12.03 19 YSATVAK|HP 0.079 . SPAC22H12.03 33 HGLLGSK|RN 0.055 . SPAC22H12.03 34 GLLGSKR|NW 0.130 . SPAC22H12.03 37 GSKRNWR|SL 0.566 *ProP* SPAC22H12.03 41 NWRSLAK|KF 0.069 . SPAC22H12.03 42 WRSLAKK|FS 0.197 . SPAC22H12.03 46 AKKFSCK|LD 0.066 . SPAC22H12.03 49 FSCKLDR|DI 0.133 . SPAC22H12.03 57 IYAIDQR|CH 0.103 . SPAC22H12.03 82 DAFQFMK|DH 0.064 . SPAC22H12.03 85 QFMKDHK|LD 0.064 . SPAC22H12.03 88 KDHKLDK|AS 0.077 . SPAC22H12.03 99 GHSMGAK|TA 0.073 . SPAC22H12.03 107 AMVTALK|WP 0.066 . SPAC22H12.03 111 ALKWPDK|VE 0.058 . SPAC22H12.03 114 WPDKVEK|LV 0.070 . SPAC22H12.03 129 WYQDLPR|DY 0.157 . SPAC22H12.03 136 DYGAYFR|KM 0.082 . SPAC22H12.03 137 YGAYFRK|MI 0.112 . SPAC22H12.03 148 DEANITK|YS 0.072 . SPAC22H12.03 154 KYSEADK|MM 0.094 . SPAC22H12.03 161 MMSTVEK|DI 0.077 . SPAC22H12.03 166 EKDILVR|SF 0.079 . SPAC22H12.03 174 FLLSNLK|KD 0.055 . SPAC22H12.03 175 LLSNLKK|DS 0.148 . SPAC22H12.03 184 NNSNTFK|FR 0.084 . SPAC22H12.03 186 SNTFKFR|VP 0.086 . SPAC22H12.03 194 PIELISK|SL 0.076 . SPAC22H12.03 197 LISKSLK|TI 0.081 . SPAC22H12.03 219 SPTLVIR|AL 0.086 . SPAC22H12.03 222 LVIRALK|AP 0.091 . SPAC22H12.03 235 SALPVFK|KF 0.067 . SPAC22H12.03 236 ALPVFKK|FF 0.131 . SPAC22H12.03 240 FKKFFPK|YE 0.073 . SPAC22H12.03 256 HWVHFEK|PK 0.076 . SPAC22H12.03 258 VHFEKPK|EF 0.080 . ____________________________^_________________

  • Fasta :-

    >SPAC22H12.03 TTTAAAACCGACCTTTTTAGCTTTCATAATCAGCAATTCAGATTATGATCACACTGCCGA TAAGTAGTTATTTATCATTCCTTGGATTAGGCTCACTTTGCTATTCGCAAACGTTTCCTG CAACTACAACTTCATGACAGATTAAATTATAATTATTTTATATCGACCTTATAGTGTTTA TTTATTACTGCACAAGAAATTATAGAGTTATGTCTCTAAAACCAGTTAAATTAGCCTTTG AGAAGTATTCTGCCACAGTTGCTAAACACCCCCCAGTTTTGATCTTCCACGGACTATTGG GATCTAAGCGTAATTGGAGAAGTTTGGCAAAAAAGTTTTCCTGCAAACTTGACCGGGATA TTTACGCTATTGATCAGAGGTGTCATGGAGATTCTCCCTGTGTAGCTCCTCTCAGCTATT CCGCCATGGCTTTGGACGCTTTCCAGTTTATGAAAGATCACAAATTAGATAAAGCATCAA TAATTGGTCATTCCATGGGAGCGAAAACTGCAATGGTAACTGCATTGAAGTGGCCCGATA AAGTTGAGAAGCTCGTGGTAGTTGATAATTCCCCTTGGTATCAAGATTTGCCCAGAGATT ATGGCGCATATTTCAGGAAAATGATACAGATTGACGAAGCTAATATTACTAAATACAGTG AGGCAGACAAAATGATGAGTACAGTCGAAAAGGATATTTTAGTTCGAAGTTTTCTTCTTT CAAATTTAAAAAAGGACTCTAATAATAGTAACACTTTTAAATTTCGGGTTCCAATCGAAT TAATTTCCAAATCCTTAAAAACAATTGAAGGTTTTCCAGCAAGCTTAAATGACCTTGTTT ACGATTCTCCCACGCTGGTCATAAGAGCCCTTAAAGCTCCTTTTATACCTGACAGTGCTT TGCCAGTATTTAAAAAGTTCTTTCCCAAATATGAACTTGTGTCACTTGATTGTGGACATT GGGTTCATTTTGAAAAACCTAAAGAGTTTTCGGAGAGCATCATAAACTTTTTAAATAATT AATAACAACCTACACTCAGTAAATTATAAAGATATCAACAACTGTTTTGAAGGATACCAC CTAGCTCAAATAGCACACAGATGGGTGA
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  • Fasta :-

    MSLKPVKLAFEKYSATVAKHPPVLIFHGLLGSKRNWRSLAKKFSCKLDRDIYAIDQRCHG DSPCVAPLSYSAMALDAFQFMKDHKLDKASIIGHSMGAKTAMVTALKWPDKVEKLVVVDN SPWYQDLPRDYGAYFRKMIQIDEANITKYSEADKMMSTVEKDILVRSFLLSNLKKDSNNS NTFKFRVPIELISKSLKTIEGFPASLNDLVYDSPTLVIRALKAPFIPDSALPVFKKFFPK YELVSLDCGHWVHFEKPKEFSESIINFLNN

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SPAC22H12.03      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India