SPAC25B8.17 | intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC25B8.17OTHER0.9830950.0166410.000263
No Results

  • Fasta :-

    >SPAC25B8.17 MEGVILASSALFTVYIGAKWSAQEEEPEEKQLINKRLAVLFPIFGGVTLVLMYLALRYLS KEYIQLILQGYASLASIICFVRSFNPKTTFGKITATMSSIAIALFYFKTKHWMASNILAW ALAANSISIMRIDSYNTGALLLGALFFYDIYFVFGTEVMVTVATGIDIPAKYVLPQFKNP TRLSMLGLGDIVMPGLMLALMYRFDLHYYINSTSQPKKHSTYFRNTFIAYGLGLGVTNFA LYYFKAAQPALLYLSPACIVAPLLTAWYRDELKTLFSFRSETEDETDEQDKCKST
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/19 Sequence name : 19 Sequence length : 295 VALUES OF COMPUTED PARAMETERS Coef20 : 4.224 CoefTot : -0.014 ChDiff : 3 ZoneTo : 23 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.176 2.188 0.370 0.826 MesoH : 0.654 1.027 -0.066 0.457 MuHd_075 : 19.464 15.204 5.785 5.596 MuHd_095 : 14.869 12.306 5.478 2.657 MuHd_100 : 14.851 12.019 5.488 3.107 MuHd_105 : 17.619 10.987 5.886 3.031 Hmax_075 : 15.050 15.137 2.817 6.172 Hmax_095 : 13.300 15.925 2.551 5.285 Hmax_100 : 12.400 14.400 2.293 4.500 Hmax_105 : 14.233 17.967 3.219 5.857 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9581 0.0419 DFMC : 0.9509 0.0491
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 295 SPAC25B8.17 MEGVILASSALFTVYIGAKWSAQEEEPEEKQLINKRLAVLFPIFGGVTLVLMYLALRYLSKEYIQLILQGYASLASIICF 80 VRSFNPKTTFGKITATMSSIAIALFYFKTKHWMASNILAWALAANSISIMRIDSYNTGALLLGALFFYDIYFVFGTEVMV 160 TVATGIDIPAKYVLPQFKNPTRLSMLGLGDIVMPGLMLALMYRFDLHYYINSTSQPKKHSTYFRNTFIAYGLGLGVTNFA 240 LYYFKAAQPALLYLSPACIVAPLLTAWYRDELKTLFSFRSETEDETDEQDKCKST 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC25B8.17 19 TVYIGAK|WS 0.071 . SPAC25B8.17 30 EEEPEEK|QL 0.062 . SPAC25B8.17 35 EKQLINK|RL 0.061 . SPAC25B8.17 36 KQLINKR|LA 0.109 . SPAC25B8.17 57 LMYLALR|YL 0.095 . SPAC25B8.17 61 ALRYLSK|EY 0.070 . SPAC25B8.17 82 SIICFVR|SF 0.130 . SPAC25B8.17 87 VRSFNPK|TT 0.094 . SPAC25B8.17 92 PKTTFGK|IT 0.064 . SPAC25B8.17 108 IALFYFK|TK 0.057 . SPAC25B8.17 110 LFYFKTK|HW 0.074 . SPAC25B8.17 131 NSISIMR|ID 0.085 . SPAC25B8.17 171 GIDIPAK|YV 0.096 . SPAC25B8.17 178 YVLPQFK|NP 0.055 . SPAC25B8.17 182 QFKNPTR|LS 0.091 . SPAC25B8.17 203 MLALMYR|FD 0.086 . SPAC25B8.17 217 NSTSQPK|KH 0.067 . SPAC25B8.17 218 STSQPKK|HS 0.168 . SPAC25B8.17 224 KHSTYFR|NT 0.138 . SPAC25B8.17 245 FALYYFK|AA 0.070 . SPAC25B8.17 269 LLTAWYR|DE 0.107 . SPAC25B8.17 273 WYRDELK|TL 0.060 . SPAC25B8.17 279 KTLFSFR|SE 0.141 . SPAC25B8.17 291 ETDEQDK|CK 0.068 . SPAC25B8.17 293 DEQDKCK|ST 0.104 . ____________________________^_________________

  • Fasta :-

    >SPAC25B8.17 ACGAGTATTTGAGGTTTGAAGGGGATAAGTTTTTGGATTTCCTTTGGTTCATCATTTTAC AAAAGATGGAGGGAGTAATACTTGCTTCGTCAGCTTTATTTACAGTTTATATAGGGGCGA AATGGTCTGCCCAAGAAGAAGAACCTGAAGAAAAACAACTTATTAATAAGCGCTTAGCTG TGCTGTTTCCTATTTTTGGAGGAGTTACGCTTGTTCTGATGTATTTGGCACTTCGATATC TGAGTAAAGAATATATTCAGCTGATACTACAGGGCTACGCAAGCTTAGCATCCATAATAT GTTTTGTACGTAGCTTTAATCCAAAAACGACATTTGGAAAAATTACCGCAACCATGAGTT CAATTGCCATTGCATTATTCTACTTTAAAACTAAACATTGGATGGCATCCAATATTTTGG CATGGGCATTAGCTGCTAATTCCATTAGTATTATGAGAATTGATTCGTATAATACTGGTG CGCTTCTCCTTGGTGCCCTTTTCTTCTACGATATCTATTTTGTATTTGGTACCGAAGTCA TGGTGACGGTAGCTACTGGAATTGACATTCCAGCTAAGTATGTACTTCCTCAATTCAAAA ACCCTACAAGGCTTTCGATGCTTGGTTTGGGTGACATTGTCATGCCTGGATTGATGCTTG CGTTAATGTATCGATTCGATCTTCACTACTATATTAATTCTACCTCCCAGCCTAAGAAGC ACTCGACATATTTTCGGAATACCTTTATAGCTTATGGGCTTGGCCTTGGAGTTACAAATT TTGCATTATATTACTTTAAAGCAGCACAGCCAGCTTTGCTTTATCTCAGTCCTGCCTGTA TTGTCGCTCCATTACTAACTGCTTGGTATCGTGACGAATTGAAAACACTCTTCTCCTTTC GTAGTGAAACAGAAGATGAAACTGACGAACAAGATAAATGTAAAAGTACTTAAAATTGGT CCTTGATTTAGAATTTCAACATTCGTTTGTTAAAACCCATTCCTTACTTCACGCTCATCC GTTATTCGCCATACCGTATTTCCATAGTTTGCCATGTATATACGTTATACATATACCATG ATATTCCACTTACCTCAATTCAATTTTTTACAAGAAATTTGCAAAAACCTTTATTTTGAA AGTTTATTTTAGAATAAAAAGTATTTGATTACAAAATTTAAATTACTCCAAATC
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  • Fasta :-

    MEGVILASSALFTVYIGAKWSAQEEEPEEKQLINKRLAVLFPIFGGVTLVLMYLALRYLS KEYIQLILQGYASLASIICFVRSFNPKTTFGKITATMSSIAIALFYFKTKHWMASNILAW ALAANSISIMRIDSYNTGALLLGALFFYDIYFVFGTEVMVTVATGIDIPAKYVLPQFKNP TRLSMLGLGDIVMPGLMLALMYRFDLHYYINSTSQPKKHSTYFRNTFIAYGLGLGVTNFA LYYFKAAQPALLYLSPACIVAPLLTAWYRDELKTLFSFRSETEDETDEQDKCKST

    No Results
    No Results
IDSitePositionGscoreIscore
SPAC25B8.17T2950.6050.022
IDSitePositionGscoreIscore
SPAC25B8.17T2950.6050.022
No Results

SPAC25B8.17      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India