SPAC2H10.02c | 26S proteasome regulatory particle assembly protein Nas2 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC2H10.02cOTHER0.9999770.0000050.000017
No Results

  • Fasta :-

    >SPAC2H10.02c MDEFKQLDLKKREIENRLNELEGVLLKERVTMDTPLLTEDGFPRSDIDVPSIRTARHEII TLRNDHRELEDQIKKVLEKVFSGFSKESLAANDETKLAQEADPLNFNAANYNMNDIISRS KILGRVKPFCVVDSVAVESPAQEAGLCIGDELVHVQNVTSLSELPTFISNNVNKTLDVLL IRGYSADGSTNLVELKLTPHKWQGPGLLGCHLR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/90 Sequence name : 90 Sequence length : 213 VALUES OF COMPUTED PARAMETERS Coef20 : 3.289 CoefTot : 0.000 ChDiff : -8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.371 1.071 -0.186 0.358 MesoH : -0.665 0.394 -0.361 0.199 MuHd_075 : 35.234 21.736 9.056 7.943 MuHd_095 : 15.536 10.423 4.136 4.288 MuHd_100 : 24.788 17.509 6.472 5.806 MuHd_105 : 25.150 19.038 6.540 5.473 Hmax_075 : -5.367 9.217 -2.451 3.687 Hmax_095 : -12.800 4.000 -5.236 1.820 Hmax_100 : -12.800 4.000 -5.097 1.820 Hmax_105 : -2.200 9.400 -2.519 3.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9767 0.0233 DFMC : 0.9738 0.0262
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 213 SPAC2H10.02c MDEFKQLDLKKREIENRLNELEGVLLKERVTMDTPLLTEDGFPRSDIDVPSIRTARHEIITLRNDHRELEDQIKKVLEKV 80 FSGFSKESLAANDETKLAQEADPLNFNAANYNMNDIISRSKILGRVKPFCVVDSVAVESPAQEAGLCIGDELVHVQNVTS 160 LSELPTFISNNVNKTLDVLLIRGYSADGSTNLVELKLTPHKWQGPGLLGCHLR 240 ................................................................................ 80 ................................................................................ 160 ..................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC2H10.02c 5 --MDEFK|QL 0.067 . SPAC2H10.02c 10 FKQLDLK|KR 0.058 . SPAC2H10.02c 11 KQLDLKK|RE 0.080 . SPAC2H10.02c 12 QLDLKKR|EI 0.240 . SPAC2H10.02c 17 KREIENR|LN 0.103 . SPAC2H10.02c 27 LEGVLLK|ER 0.054 . SPAC2H10.02c 29 GVLLKER|VT 0.072 . SPAC2H10.02c 44 TEDGFPR|SD 0.164 . SPAC2H10.02c 53 IDVPSIR|TA 0.114 . SPAC2H10.02c 56 PSIRTAR|HE 0.242 . SPAC2H10.02c 63 HEIITLR|ND 0.092 . SPAC2H10.02c 67 TLRNDHR|EL 0.139 . SPAC2H10.02c 74 ELEDQIK|KV 0.074 . SPAC2H10.02c 75 LEDQIKK|VL 0.108 . SPAC2H10.02c 79 IKKVLEK|VF 0.062 . SPAC2H10.02c 86 VFSGFSK|ES 0.072 . SPAC2H10.02c 96 AANDETK|LA 0.073 . SPAC2H10.02c 119 MNDIISR|SK 0.110 . SPAC2H10.02c 121 DIISRSK|IL 0.067 . SPAC2H10.02c 125 RSKILGR|VK 0.079 . SPAC2H10.02c 127 KILGRVK|PF 0.060 . SPAC2H10.02c 174 ISNNVNK|TL 0.081 . SPAC2H10.02c 182 LDVLLIR|GY 0.100 . SPAC2H10.02c 196 TNLVELK|LT 0.061 . SPAC2H10.02c 201 LKLTPHK|WQ 0.077 . SPAC2H10.02c 213 LLGCHLR|-- 0.112 . ____________________________^_________________

  • Fasta :-

    >SPAC2H10.02c TGTATATAGTCGCCTTCCATACTAACCAACAGCTAAATAAACGATATTCTCACAAAGGAT TAAATTATCCTATATTTTAAACAAATGGACGAATTTAAACAGCTTGATCTGAAAAAGCGT GAAATCGAAAATAGATTGAATGAATTAGAAGGCGTTTTACTTAAGGAACGTGTAACAATG GACACACCTTTATTGACTGAAGACGGATTCCCAAGATCAGATATTGATGTGCCTAGTATT AGAACAGCACGCCATGAAATTATTACACTCAGAAACGATCATCGAGAACTAGAAGATCAG ATAAAGAAGGTACTTGAAAAAGTATTTTCGGGATTTTCCAAAGAATCTTTAGCCGCTAAT GATGAAACTAAACTTGCACAAGAAGCAGATCCCCTTAACTTTAATGCTGCTAACTACAAC ATGAATGATATTATATCTAGATCCAAAATCCTAGGACGTGTAAAGCCATTCTGTGTTGTA GATTCTGTTGCAGTCGAAAGTCCGGCTCAAGAAGCTGGTCTCTGTATTGGTGATGAGTTA GTTCATGTTCAAAATGTTACTTCCTTATCAGAACTTCCTACTTTCATATCTAATAATGTC AATAAAACGCTGGATGTTCTTTTAATCCGTGGTTACTCAGCAGATGGATCGACTAACTTG GTAGAATTAAAATTGACCCCACATAAATGGCAAGGCCCTGGGCTTCTAGGTTGTCATTTG CGCTGAATGATAGCCCGCTTTGCCTCGCCAAAATGCATAAATAAAAGACAGAGGATTTAT TGTATTTATGATTATTACAAGTATTATTAATGATATAAAACCCATGCACATAATACTCAA TTCCTTAATATGCAT
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  • Fasta :-

    MDEFKQLDLKKREIENRLNELEGVLLKERVTMDTPLLTEDGFPRSDIDVPSIRTARHEII TLRNDHRELEDQIKKVLEKVFSGFSKESLAANDETKLAQEADPLNFNAANYNMNDIISRS KILGRVKPFCVVDSVAVESPAQEAGLCIGDELVHVQNVTSLSELPTFISNNVNKTLDVLL IRGYSADGSTNLVELKLTPHKWQGPGLLGCHLR

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SPAC2H10.02c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India