SPAC31A2.04c | 20S proteasome complex subunit beta 4 Pre1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC31A2.04cOTHER0.9932860.0059940.000719
No Results

  • Fasta :-

    >SPAC31A2.04c MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYI AANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLD YLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFI CKVVDKDGIREINI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/397 Sequence name : 397 Sequence length : 194 VALUES OF COMPUTED PARAMETERS Coef20 : 4.196 CoefTot : 0.000 ChDiff : 0 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.053 1.271 0.202 0.423 MesoH : -0.759 0.180 -0.379 0.156 MuHd_075 : 13.910 5.821 4.040 1.566 MuHd_095 : 13.676 9.154 2.869 3.348 MuHd_100 : 6.128 3.857 0.913 2.132 MuHd_105 : 3.499 3.124 2.052 0.823 Hmax_075 : 14.700 16.800 3.069 5.483 Hmax_095 : 12.075 12.600 1.000 4.716 Hmax_100 : 11.400 10.600 0.280 4.400 Hmax_105 : 6.700 10.500 0.280 4.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9767 0.0233 DFMC : 0.9629 0.0371
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 194 SPAC31A2.04c MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEAT 80 ASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRI 160 MKLCFDELKKRMPIDFKGFICKVVDKDGIREINI 240 ................................................................................ 80 ................................................................................ 160 .................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC31A2.04c 23 SSSSAVR|GI 0.117 . SPAC31A2.04c 29 RGITVLK|PD 0.063 . SPAC31A2.04c 34 LKPDDDK|SQ 0.064 . SPAC31A2.04c 70 ISLYTLR|HN 0.073 . SPAC31A2.04c 85 ATASFTR|KQ 0.070 . SPAC31A2.04c 86 TASFTRK|QL 0.161 . SPAC31A2.04c 93 QLATSLR|SR 0.143 . SPAC31A2.04c 95 ATSLRSR|KP 0.090 . SPAC31A2.04c 96 TSLRSRK|PY 0.190 . SPAC31A2.04c 113 YETNLGK|PE 0.057 . SPAC31A2.04c 127 YLATCVR|VP 0.077 . SPAC31A2.04c 146 CLSIFDR|YY 0.117 . SPAC31A2.04c 149 IFDRYYK|PD 0.103 . SPAC31A2.04c 159 TIDEAVR|IM 0.070 . SPAC31A2.04c 162 EAVRIMK|LC 0.123 . SPAC31A2.04c 169 LCFDELK|KR 0.059 . SPAC31A2.04c 170 CFDELKK|RM 0.070 . SPAC31A2.04c 171 FDELKKR|MP 0.137 . SPAC31A2.04c 177 RMPIDFK|GF 0.062 . SPAC31A2.04c 182 FKGFICK|VV 0.082 . SPAC31A2.04c 186 ICKVVDK|DG 0.074 . SPAC31A2.04c 190 VDKDGIR|EI 0.081 . ____________________________^_________________

  • Fasta :-

    >SPAC31A2.04c TATAGTTTTCCATTGGCATCTCGTTAGCGTACTAAACGTCTCAGCTCAGCACAACACTTT ACCTTTACCAAACCACCATCAAAAGCCATGGAATCACTACTGGCAGTTCAGGGTCAGGAT TTTGTACTCACTGCTTCATCATCATCAGCAGTTCGTGGAATTACTGTTTTGAAACCTGAC GATGACAAAAGTCAGATTTTAAATTCGCATAATCTTATGTTATACTGTGGTGAAGCTGGC GATACTACTAATTTTGCTGAATACATTGCAGCAAATATATCTCTTTACACTTTAAGACAT AATTTAAATTTAAGCCCTGAAGCTACCGCTTCCTTTACGAGAAAGCAACTTGCTACTTCA CTTCGTTCGAGAAAACCATATCAAGTCAATATTTTATTAGCTGGTTATGAAACGAATTTA GGAAAGCCTGAGCTTTTTTGGCTAGATTATTTAGCCACTTGTGTTCGTGTACCTTATGCC TGCCAAGGATACAGTTCTTTTTATTGTTTGTCTATCTTTGATCGATATTACAAACCAGAC CTCACCATTGATGAAGCCGTGCGAATTATGAAATTATGTTTTGATGAACTTAAAAAGCGT ATGCCTATTGACTTTAAAGGTTTCATTTGTAAAGTGGTTGATAAAGATGGAATTCGCGAA ATCAATATTTAAATATATTAATTTATCCATTTCTAGAAGTCAAAAACTCGACCGAATACG ACATGACAATTATCATAGATTCAATATGTTCATACTATTTCACTTCACCCTTTTTCAGTA AAAGCAGACGGTTTGACTAACAAATGTTATGATTTTCACTATTATTTGCTTACAAAGCGC TTAAACAATATATT
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  • Fasta :-

    MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYI AANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLD YLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFI CKVVDKDGIREINI

    No Results
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SPAC31A2.04c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India