SPAC3A11.12c | 19S proteasome regulatory subunit Rpt5 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC3A11.12cOTHER0.9999780.0000060.000017
No Results

  • Fasta :-

    >SPAC3A11.12c MSTLEELDALDQSQQGGSSNNEGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRL THEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKS AVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKP TERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACA AQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKA GDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEA RVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFM DGILEVQMRKSKTLQYFA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/132 Sequence name : 132 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 3.186 CoefTot : 0.234 ChDiff : -17 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.865 1.159 -0.040 0.482 MesoH : -0.423 0.465 -0.318 0.232 MuHd_075 : 11.787 4.652 3.682 0.548 MuHd_095 : 9.498 1.883 2.228 1.083 MuHd_100 : 15.706 7.617 4.694 2.173 MuHd_105 : 23.691 14.571 7.205 4.251 Hmax_075 : -1.400 1.867 -1.574 1.225 Hmax_095 : -2.887 -1.313 -2.775 0.875 Hmax_100 : -0.400 2.900 -1.470 1.580 Hmax_105 : 7.583 7.933 0.154 3.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9916 0.0084 DFMC : 0.9663 0.0337
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 SPAC3A11.12c MSTLEELDALDQSQQGGSSNNEGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISN 80 NKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLII 160 DKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACA 240 AQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 320 SDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCV 400 EAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYFA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC3A11.12c 42 IDELNSR|TR 0.065 . SPAC3A11.12c 44 ELNSRTR|LL 0.103 . SPAC3A11.12c 51 LLENDIK|VM 0.056 . SPAC3A11.12c 54 NDIKVMK|SE 0.088 . SPAC3A11.12c 59 MKSEFQR|LT 0.132 . SPAC3A11.12c 64 QRLTHEK|ST 0.085 . SPAC3A11.12c 70 KSTMLEK|IK 0.071 . SPAC3A11.12c 72 TMLEKIK|EN 0.065 . SPAC3A11.12c 77 IKENQEK|IS 0.069 . SPAC3A11.12c 82 EKISNNK|ML 0.060 . SPAC3A11.12c 116 QNSEATR|VG 0.087 . SPAC3A11.12c 119 EATRVGK|SA 0.256 . SPAC3A11.12c 124 GKSAVIK|TS 0.080 . SPAC3A11.12c 128 VIKTSTR|QT 0.077 . SPAC3A11.12c 154 DLIGVNK|DS 0.072 . SPAC3A11.12c 162 SYLIIDK|LP 0.054 . SPAC3A11.12c 170 PSEYDSR|VK 0.073 . SPAC3A11.12c 172 EYDSRVK|AM 0.061 . SPAC3A11.12c 179 AMEVDEK|PT 0.067 . SPAC3A11.12c 183 DEKPTER|YS 0.118 . SPAC3A11.12c 192 DIGGLSK|QI 0.067 . SPAC3A11.12c 210 PMQQADK|FR 0.058 . SPAC3A11.12c 212 QQADKFR|KL 0.146 . SPAC3A11.12c 213 QADKFRK|LG 0.069 . SPAC3A11.12c 217 FRKLGVK|PP 0.062 . SPAC3A11.12c 220 LGVKPPK|GC 0.067 . SPAC3A11.12c 232 GPPGTGK|TL 0.058 . SPAC3A11.12c 237 GKTLLAR|AC 0.091 . SPAC3A11.12c 249 SNATFLK|LA 0.096 . SPAC3A11.12c 265 FIGDGAK|LV 0.075 . SPAC3A11.12c 268 DGAKLVR|DA 0.129 . SPAC3A11.12c 275 DAFALAK|EK 0.069 . SPAC3A11.12c 277 FALAKEK|SP 0.070 . SPAC3A11.12c 293 LDAIGTK|RF 0.059 . SPAC3A11.12c 294 DAIGTKR|FD 0.208 . SPAC3A11.12c 299 KRFDSEK|AG 0.071 . SPAC3A11.12c 303 SEKAGDR|EV 0.092 . SPAC3A11.12c 307 GDREVQR|TM 0.093 . SPAC3A11.12c 324 GFSSDDR|VK 0.076 . SPAC3A11.12c 326 SSDDRVK|VI 0.061 . SPAC3A11.12c 333 VIAATNR|VD 0.072 . SPAC3A11.12c 343 LDPALLR|SG 0.082 . SPAC3A11.12c 346 ALLRSGR|LD 0.203 . SPAC3A11.12c 349 RSGRLDR|KL 0.272 . SPAC3A11.12c 350 SGRLDRK|LE 0.072 . SPAC3A11.12c 361 LPNEEAR|VG 0.093 . SPAC3A11.12c 366 ARVGILR|IH 0.092 . SPAC3A11.12c 370 ILRIHSR|KM 0.086 . SPAC3A11.12c 371 LRIHSRK|MA 0.121 . SPAC3A11.12c 385 NWEELAR|ST 0.150 . SPAC3A11.12c 396 YNGAMLK|SV 0.104 . SPAC3A11.12c 408 AGMIALR|QG 0.122 . SPAC3A11.12c 413 LRQGDTK|IN 0.079 . SPAC3A11.12c 429 ILEVQMR|KS 0.091 . SPAC3A11.12c 430 LEVQMRK|SK 0.094 . SPAC3A11.12c 432 VQMRKSK|TL 0.105 . ____________________________^_________________

  • Fasta :-

    >SPAC3A11.12c TAACCGGAACACACATGTCAACTCTCGAAGAATTAGACGCGCTAGATCAATCCCAGCAGG GAGGATCCTCCAATAATGAAGGTTTGGATGGAATTGAACAAGAAATTTTGGCCGCCGGTA TAGATGAATTGAATAGTCGGACACGATTGTTGGAAAATGATATTAAGGTTATGAAATCCG AGTTTCAAAGATTAACTCATGAAAAGAGCACCATGCTCGAAAAAATCAAAGAAAACCAAG AAAAAATTTCGAATAATAAGATGCTACCTTATTTGGTAGGAAACGTTGTTGAAATTTTAG ATATGCAACCTGATGAAGTTGATGTCCAAGAATCAGCTAACCAAAACTCTGAGGCTACTC GTGTTGGCAAGTCAGCCGTTATTAAGACATCTACTCGTCAAACCATCTTCCTTCCCTTAA TCGGTCTTGTTGAACCTGAAGAGCTTCATCCGGGTGATCTTATTGGTGTCAACAAAGATT CTTACCTGATCATTGATAAATTACCTTCAGAGTATGATAGCCGTGTTAAGGCTATGGAAG TAGACGAAAAACCCACAGAGCGTTATTCAGATATTGGTGGTTTATCAAAACAAATAGAAG AACTGTTTGAAGCCATCGTTTTGCCCATGCAGCAGGCTGATAAATTCCGTAAACTTGGCG TGAAACCTCCCAAGGGATGTTTGATGTTTGGTCCCCCTGGCACTGGTAAGACCTTATTAG CTCGTGCCTGTGCTGCCCAGTCCAATGCTACATTCCTAAAACTTGCGGCTCCTCAACTTG TTCAAATGTTTATTGGTGATGGCGCTAAACTCGTTCGCGATGCTTTCGCCTTGGCCAAAG AAAAAAGCCCTGCCATTATATTTATTGATGAATTAGATGCTATTGGTACCAAGCGTTTTG ATTCTGAAAAAGCCGGTGATCGTGAAGTCCAACGTACTATGCTGGAGCTCCTCAATCAAC TCGATGGTTTTAGTAGTGATGACCGTGTCAAGGTGATTGCTGCTACAAATCGTGTAGATA CGTTGGATCCGGCTCTGTTACGTTCTGGTCGTCTGGACCGAAAACTCGAATTTCCTCTTC CCAATGAAGAAGCTCGTGTTGGTATTTTACGCATTCATTCACGTAAAATGGCCATTGACG ACGATATTAACTGGGAGGAGTTGGCGAGAAGTACAGATGAATATAATGGTGCCATGTTGA AGAGCGTTTGCGTTGAAGCGGGTATGATTGCTCTTCGTCAAGGTGATACTAAAATTAATC ATGAACATTTTATGGATGGTATATTGGAAGTACAAATGCGCAAATCTAAGACTCTGCAAT ACTTTGCATAAGCGTTACTTTCTTTCATTTCTACGAGGACGGTACCGTATATATCCCGAT TATCTCATTCGTCTCATCCGTCTCATCTTTCTTCTGTCTTTTTGTAAATTGGTTTTTATG ATCCCATGGGAGCTTGATATTATACGCTAGTAAATATTAAGGGAAAAAAGGACCTCCCAG TGGGACAGCAAGTCAATGTACATTTGTTTACGTTGGAAGGAATCAGACGACTGTACATTT GAAAAGAGCTTTGCTCGATGTAATGATTAGCGATGTAGCTATGAAAATGTTGGAACGAAT ATCAATCTATGTGTTATTTAAGCTTATAAGGTTATCAATGTGTTTCTGCCACGAAACTTG AATCAACATTACTGAATTAAATCGTTTGTTTGGCACAATATCCCTAGTCGTTTTGCCCAT TCTCCTCATTCGTATTAAAAAACGAAATCTTTATGTTGCAAAGATTAGGAATAACAGCGA TGACTCATGAACATCCAGTATGCATTTCCTTTTTCGTTTTGGAAATATTAATAATTGGAA ACCAAGTAGCTTGATTCTTAACAATTAATTCATTCGAAGCCCA
  • Download Fasta

  • Fasta :-

    MSTLEELDALDQSQQGGSSNNEGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRL THEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKS AVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKP TERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACA AQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKA GDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEA RVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFM DGILEVQMRKSKTLQYFA

  • title: ATP binding site
  • coordinates: P227,P228,G229,T230,G231,K232,T233,L234,D285,N332
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC3A11.12c369 SLRIHSRKMA0.995unspSPAC3A11.12c369 SLRIHSRKMA0.995unspSPAC3A11.12c369 SLRIHSRKMA0.995unspSPAC3A11.12c165 SDKLPSEYDS0.998unspSPAC3A11.12c297 SKRFDSEKAG0.998unsp

SPAC3H5.01c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India