SPAC56F8.08 | UBA domain protein Mud1

UniProt_ID: Q10256

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004190 GO:0005515 GO:0043130
Computed_GO_Functions: aspartic-type endopeptidase activity protein binding ubiquitin binding
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs: GO:0005886
Curated_GO_Components: plasma membrane
Curated_GO_Function_IDs: GO:0000149 GO:0031593
Curated_GO_Functions: SNARE binding polyubiquitin modification-dependent protein binding
Curated_GO_Processes: proteasome-mediated ubiquitin-dependent protein catabolic process regulation of exocytosis

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	SPAC56F8.08	OTHER	0.954295	0.015686	0.030019

No Results

Fasta :-
>SPAC56F8.08 MNNLTPENIRQTILATPFLLNRIRTEFPQLAAVLNDPNAFATTWQSINASQLLQIPSSTY SMGMPSFSEDDLFDVEVQRRIEEQIRQNAVTENMQSAIENHPEVFGQVYMLFVNVEINGH KVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVHSAPLKIGDLY LPCRFTVIEGRDVDMLLGLDMLRRYQACIDLENNVLRIHGKEIPFLGESEIPKLLANVEP SANAHGLGIEPASKASASSPNPQSGTRLGTKESVAPNNEGSSNPPSLVNPPTDPGLNSKI AQLVSMGFDPLEAAQALDAANGDLDVAASFLL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/141 Sequence name : 141 Sequence length : 332 VALUES OF COMPUTED PARAMETERS Coef20 : 4.047 CoefTot : -0.396 ChDiff : -13 ZoneTo : 25 KR : 3 DE : 1 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 1.106 -0.030 0.448 MesoH : -0.481 0.493 -0.282 0.211 MuHd_075 : 27.411 30.650 9.644 7.799 MuHd_095 : 31.727 14.794 8.155 5.884 MuHd_100 : 33.301 20.658 9.796 6.865 MuHd_105 : 33.010 22.947 10.326 6.634 Hmax_075 : 21.700 27.883 5.350 8.867 Hmax_095 : 7.800 12.400 1.382 4.420 Hmax_100 : 17.300 19.700 3.993 6.300 Hmax_105 : 18.783 23.800 4.755 7.408 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7403 0.2597 DFMC : 0.6210 0.3790

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 332 SPAC56F8.08 MNNLTPENIRQTILATPFLLNRIRTEFPQLAAVLNDPNAFATTWQSINASQLLQIPSSTYSMGMPSFSEDDLFDVEVQRR 80 IEEQIRQNAVTENMQSAIENHPEVFGQVYMLFVNVEINGHKVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGV 160 GMAKILGCVHSAPLKIGDLYLPCRFTVIEGRDVDMLLGLDMLRRYQACIDLENNVLRIHGKEIPFLGESEIPKLLANVEP 240 SANAHGLGIEPASKASASSPNPQSGTRLGTKESVAPNNEGSSNPPSLVNPPTDPGLNSKIAQLVSMGFDPLEAAQALDAA 320 NGDLDVAASFLL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC56F8.08 10 LTPENIR|QT 0.082 . SPAC56F8.08 22 TPFLLNR|IR 0.073 . SPAC56F8.08 24 FLLNRIR|TE 0.088 . SPAC56F8.08 79 FDVEVQR|RI 0.108 . SPAC56F8.08 80 DVEVQRR|IE 0.143 . SPAC56F8.08 86 RIEEQIR|QN 0.099 . SPAC56F8.08 121 VEINGHK|VK 0.056 . SPAC56F8.08 123 INGHKVK|AF 0.086 . SPAC56F8.08 142 SADCAEK|CG 0.056 . SPAC56F8.08 147 EKCGLTR|LL 0.092 . SPAC56F8.08 152 TRLLDTR|FQ 0.115 . SPAC56F8.08 158 RFQGVAK|GV 0.112 . SPAC56F8.08 164 KGVGMAK|IL 0.074 . SPAC56F8.08 175 VHSAPLK|IG 0.064 . SPAC56F8.08 184 DLYLPCR|FT 0.103 . SPAC56F8.08 191 FTVIEGR|DV 0.153 . SPAC56F8.08 203 LGLDMLR|RY 0.071 . SPAC56F8.08 204 GLDMLRR|YQ 0.108 . SPAC56F8.08 217 LENNVLR|IH 0.148 . SPAC56F8.08 221 VLRIHGK|EI 0.073 . SPAC56F8.08 233 GESEIPK|LL 0.080 . SPAC56F8.08 254 GIEPASK|AS 0.057 . SPAC56F8.08 267 NPQSGTR|LG 0.077 . SPAC56F8.08 271 GTRLGTK|ES 0.058 . SPAC56F8.08 299 DPGLNSK|IA 0.068 . ____________________________^_________________

Fasta :-
>SPAC56F8.08 ATGAATAATTTAACACCAGAAAATATTCGTCAAACGATTTTAGCAACTCCTTTTCTATTA AATCGAATACGCACAGAGTTTCCTCAACTAGCTGCTGTCCTTAATGATCCCAATGCGTTT GCTACTACATGGCAGTCCATTAATGCTTCTCAATTATTGCAGATTCCTTCTTCTACATAT TCGATGGGAATGCCTTCATTTTCTGAAGATGACCTCTTTGATGTTGAAGTCCAACGACGT ATTGAAGAGCAGATTCGTCAAAATGCCGTGACCGAGAATATGCAATCGGCAATAGAAAAC CATCCTGAAGTGTTTGGTCAAGTTTATATGCTTTTTGTAAACGTTGAGATTAACGGTCAT AAGGTGAAAGCATTTGTGGATTCTGGTGCTCAAGCTACCATTTTGTCTGCTGATTGCGCT GAAAAGTGCGGTCTTACCAGGCTTCTTGACACTAGATTTCAAGGTGTCGCTAAGGGCGTA GGAATGGCTAAAATATTAGGTTGTGTTCACAGTGCACCTTTAAAGATTGGCGATTTATAT CTTCCATGTCGATTTACTGTTATTGAAGGTCGGGATGTTGATATGCTACTTGGTCTTGAT ATGTTACGCCGTTATCAAGCTTGTATAGATTTAGAAAATAACGTTCTTCGGATTCATGGA AAAGAAATTCCTTTTCTTGGAGAATCTGAAATTCCAAAATTGCTGGCTAATGTGGAGCCA TCTGCAAATGCACACGGTTTAGGTATTGAACCTGCAAGTAAGGCGAGCGCTTCTTCACCT AATCCACAAAGTGGCACTCGTCTTGGTACCAAAGAAAGCGTAGCACCCAACAATGAGGGA TCTTCCAATCCCCCTTCCTTGGTAAATCCTCCCACTGACCCCGGTTTGAACTCCAAAATT GCACAGCTAGTCAGTATGGGATTTGATCCATTAGAGGCTGCGCAGGCGTTAGACGCTGCG AATGGAGATTTAGATGTAGCTGCTTCTTTTCTCCTTTAACGACTTAATTCGATTTCGGGG AGATTGGATATACATAATCAATGATTTTAGTCATGATAAAAATTAGGGAAATGATTATTT TC
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Fasta :-

MNNLTPENIRQTILATPFLLNRIRTEFPQLAAVLNDPNAFATTWQSINASQLLQIPSSTY SMGMPSFSEDDLFDVEVQRRIEEQIRQNAVTENMQSAIENHPEVFGQVYMLFVNVEINGH KVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVHSAPLKIGDLY LPCRFTVIEGRDVDMLLGLDMLRRYQACIDLENNVLRIHGKEIPFLGESEIPKLLANVEP SANAHGLGIEPASKASASSPNPQSGTRLGTKESVAPNNEGSSNPPSLVNPPTDPGLNSKI AQLVSMGFDPLEAAQALDAANGDLDVAASFLL

Retroviral protease (retropepsin)

title: catalytic motif
coordinates: D127,S128,G129

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	SPAC56F8.08	T	270	0.663	0.050	SPAC56F8.08	T	266	0.637	0.024	SPAC56F8.08	S	273	0.532	0.049	SPAC56F8.08	S	264	0.502	0.021

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	SPAC56F8.08	T	270	0.663	0.050	SPAC56F8.08	T	266	0.637	0.024	SPAC56F8.08	S	273	0.532	0.049	SPAC56F8.08	S	264	0.502	0.021

	ID	Site	Peptide	Score	Method
	SPAC56F8.08	68 S	MPSFSEDDL	0.992	unsp

SPAC56F8.08 | UBA domain protein Mud1

ID's

UniProt_ID: Q10256

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004190 GO:0005515 GO:0043130

Computed_GO_Functions: aspartic-type endopeptidase activity protein binding ubiquitin binding

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs: GO:0005886

Curated_GO_Components: plasma membrane

Curated_GO_Function_IDs: GO:0000149 GO:0031593

Curated_GO_Functions: SNARE binding polyubiquitin modification-dependent protein binding

Curated_GO_Processes: proteasome-mediated ubiquitin-dependent protein catabolic process regulation of exocytosis

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Retroviral protease (retropepsin)

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

SPAC56F8.08

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India