SPAC637.10c | 19S proteasome regulatory subunit Rpn10

UniProt_ID: O94444

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs: GO:0005829 GO:0005634 GO:0008540 GO:0008541
Curated_GO_Components: cytosol nucleus proteasome regulatory particle, base subcomplex proteasome regulatory particle, lid subcomplex
Curated_GO_Function_IDs: GO:0036435 GO:0031593 GO:0005515 GO:0043130
Curated_GO_Functions: K48-linked polyubiquitin modification-dependent protein binding polyubiquitin modification-dependent protein binding protein binding ubiquitin binding
Curated_GO_Processes: positive regulation of mitotic metaphase/anaphase transition proteasome assembly proteasome-mediated ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	SPAC637.10c	OTHER	0.999620	0.000371	0.000008

No Results

Fasta :-
>SPAC637.10c MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQ VLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVE DEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIPPSPQLLSD LVNQSPIGQGVVASQNQFEYGVDPNLDVELALALELSMAEERARQEVAAQKSSEETEDKK MQE
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/85 Sequence name : 85 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 3.767 CoefTot : 0.122 ChDiff : -12 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.435 0.965 -0.067 0.439 MesoH : -0.629 0.143 -0.420 0.205 MuHd_075 : 15.310 8.153 3.007 1.827 MuHd_095 : 24.092 16.936 7.636 3.586 MuHd_100 : 30.233 19.442 9.427 4.141 MuHd_105 : 29.980 16.686 9.035 3.488 Hmax_075 : 13.600 17.300 1.570 5.500 Hmax_095 : 16.363 16.800 3.051 5.276 Hmax_100 : 16.800 19.300 3.707 5.870 Hmax_105 : 17.000 17.000 3.122 5.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9375 0.0625 DFMC : 0.9368 0.0632

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 SPAC637.10c MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDLP 80 VRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAA 160 NSSDSCHLVSIPPSPQLLSDLVNQSPIGQGVVASQNQFEYGVDPNLDVELALALELSMAEERARQEVAAQKSSEETEDKK 240 MQE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC637.10c 25 GDYIPTR|FE 0.131 . SPAC637.10c 30 TRFEAQK|DT 0.094 . SPAC637.10c 40 HMIFNQK|IN 0.066 . SPAC637.10c 67 VLSTLTR|DY 0.190 . SPAC637.10c 71 LTRDYGK|FL 0.082 . SPAC637.10c 82 MHDLPVR|GN 0.091 . SPAC637.10c 86 PVRGNAK|FG 0.074 . SPAC637.10c 99 IAQLALK|HR 0.062 . SPAC637.10c 101 QLALKHR|EN 0.108 . SPAC637.10c 104 LKHRENK|IQ 0.150 . SPAC637.10c 107 RENKIQR|QR 0.102 . SPAC637.10c 109 NKIQRQR|IV 0.112 . SPAC637.10c 123 PIVEDEK|NL 0.056 . SPAC637.10c 127 DEKNLIR|LA 0.075 . SPAC637.10c 130 NLIRLAK|RM 0.129 . SPAC637.10c 131 LIRLAKR|MK 0.156 . SPAC637.10c 133 RLAKRMK|KN 0.074 . SPAC637.10c 134 LAKRMKK|NN 0.238 . SPAC637.10c 222 LSMAEER|AR 0.085 . SPAC637.10c 224 MAEERAR|QE 0.102 . SPAC637.10c 231 QEVAAQK|SS 0.085 . SPAC637.10c 239 SEETEDK|KM 0.060 . SPAC637.10c 240 EETEDKK|MQ 0.085 . ____________________________^_________________

Fasta :-
>SPAC637.10c CCGAGAATGACTAGAGAAGGTGAGTAGTAATACCTTGTCTAGTTCACTTTGCAACACATC TTCTGTAATCTACCAAGCGTTCTTTCAAATTTCTTCGCATTAAGTTTTAAATTATAGGTC TTCAAGATGGTGTTAGAAGCAACGATGATTCTAATTGATAATTCAGAATGGATGATTAAT GGTGATTATATACCTACGAGGTTTGAAGCTCAAAAGGATACTGTACATATGATTTTCAAT CAAAAGATCAATGATAATCCGGAGAACATGTGTGGTTTAATGACAATTGGTGATAATAGT CCCCAAGTTCTTTCTACATTAACCAGAGATTATGGTAAATTCTTATCTGCAATGCACGAC CTGCCTGTCCGAGGAAACGCAAAGTTTGGCGATGGTATACAGATTGCGCAGTTAGCCTTA AAGCATAGAGAAAACAAAATTCAACGTCAAAGAATTGTTGCATTTGTAGGTTCTCCTATT GTTGAGGACGAGAAAAATCTTATTCGTCTAGCCAAGCGTATGAAAAAGAATAATGTTGCT ATTGATATCATTCACATTGGTGAGCTTCAGAATGAATCAGCTTTGCAGCATTTCATTGAC GCTGCTAATTCAAGTGACAGTTGTCATCTTGTCAGCATTCCACCTAGCCCGCAGTTACTT TCAGATTTGGTAAATCAATCCCCTATTGGACAAGGTGTAGTTGCTTCTCAAAACCAATTT GAGTATGGAGTCGATCCTAATCTTGACGTTGAATTGGCGTTAGCCTTGGAACTTTCAATG GCGGAGGAACGAGCACGTCAAGAAGTTGCTGCTCAAAAATCATCTGAAGAAACTGAGGAT AAAAAAATGCAAGAATGATCCGAAGATGTCTACGATTCCTTATCCTTATGAAAGACAAAT TAACGTTCTTGTACTTTACTAGCCATGCTTTATGCAGCAACGTTTAAATTAGATTGAATC CTAAAAATCATGATTTTTCAAAATATATCCAAAATAATAAATTGGCAGCATTTTGTTTCA TTTTCGTA
Download Fasta

Fasta :-

MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQ VLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVE DEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIPPSPQLLSD LVNQSPIGQGVVASQNQFEYGVDPNLDVELALALELSMAEERARQEVAAQKSSEETEDKK MQE

Integrin A (or I) domain

title: partial signature motif
coordinates: D11,S13,T64

No Results

	ID	Site	Peptide	Score	Method
	SPAC637.10c	232 S	AAQKSSEET	0.997	unsp

SPAC637.10c | 19S proteasome regulatory subunit Rpn10

ID's

UniProt_ID: O94444

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs: GO:0005829 GO:0005634 GO:0008540 GO:0008541

Curated_GO_Components: cytosol nucleus proteasome regulatory particle, base subcomplex proteasome regulatory particle, lid subcomplex

Curated_GO_Function_IDs: GO:0036435 GO:0031593 GO:0005515 GO:0043130

Curated_GO_Functions: K48-linked polyubiquitin modification-dependent protein binding polyubiquitin modification-dependent protein binding protein binding ubiquitin binding

Curated_GO_Processes: positive regulation of mitotic metaphase/anaphase transition proteasome assembly proteasome-mediated ubiquitin-dependent protein catabolic process

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Integrin A (or I) domain

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

SPAC637.10c

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India