SPAC6G9.08 | ubiquitin C-terminal hydrolase Ubp6

_IDPredictionOTHERSPmTPCS_Position
SPAC6G9.08OTHER0.9991510.0000540.000795
No Results

  • Fasta :-

    >SPAC6G9.08 MMIPIAIRWQGKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSV GIKPNATLLMMGTAGELPTAMPIPAVESVEQEESEDDGYPSGLINLGNTCYMNSTVQMLR AIPELSDAVSQFNSSGGLVAEYRTLLNSMQSNAPVTPMRFLQSLRMEYPQFAEMSRETGG YAQQDAEECWSFLLSVLQRSLSSEWVQKNMAGKLLSTMKCDENEVQEQPSISHDTFLSLP CHISMHTSYMTQGILEGLTQKISKHSDVLNRDAMYSKISRISRLPNYLTVNFVRFYWKAS IGKKAKILRKVKFPFELDAVEFCTPELSQKLIPVRDKLREIEKNDEEHERAAKRIKIQPS EDEKEAEAECRLTQVATCQSLVDPELADDEGANPTGLYDLVGVLSHAGASASSGHYQAWI RNSNNRAEWFRFNDAKVSIVPAEKIETLDGGGEADSAYILLYKAKDIA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/537 Sequence name : 537 Sequence length : 468 VALUES OF COMPUTED PARAMETERS Coef20 : 3.345 CoefTot : -0.765 ChDiff : -14 ZoneTo : 14 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.318 0.030 0.498 MesoH : -0.429 0.137 -0.357 0.210 MuHd_075 : 20.666 9.859 4.999 3.492 MuHd_095 : 16.098 8.526 5.691 4.233 MuHd_100 : 9.374 3.737 3.788 2.759 MuHd_105 : 6.046 2.520 1.745 1.335 Hmax_075 : 3.617 6.900 -1.848 3.663 Hmax_095 : 9.188 10.500 1.117 4.681 Hmax_100 : 5.300 7.000 0.422 4.210 Hmax_105 : 4.667 8.400 -1.041 3.582 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9850 0.0150 DFMC : 0.9625 0.0375
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 468 SPAC6G9.08 MMIPIAIRWQGKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATLLMMGTAGELPTA 80 MPIPAVESVEQEESEDDGYPSGLINLGNTCYMNSTVQMLRAIPELSDAVSQFNSSGGLVAEYRTLLNSMQSNAPVTPMRF 160 LQSLRMEYPQFAEMSRETGGYAQQDAEECWSFLLSVLQRSLSSEWVQKNMAGKLLSTMKCDENEVQEQPSISHDTFLSLP 240 CHISMHTSYMTQGILEGLTQKISKHSDVLNRDAMYSKISRISRLPNYLTVNFVRFYWKASIGKKAKILRKVKFPFELDAV 320 EFCTPELSQKLIPVRDKLREIEKNDEEHERAAKRIKIQPSEDEKEAEAECRLTQVATCQSLVDPELADDEGANPTGLYDL 400 VGVLSHAGASASSGHYQAWIRNSNNRAEWFRFNDAKVSIVPAEKIETLDGGGEADSAYILLYKAKDIA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC6G9.08 8 MIPIAIR|WQ 0.100 . SPAC6G9.08 12 AIRWQGK|KY 0.068 . SPAC6G9.08 13 IRWQGKK|YD 0.139 . SPAC6G9.08 28 ETGSTLK|HQ 0.063 . SPAC6G9.08 41 TQVPPER|QK 0.094 . SPAC6G9.08 43 VPPERQK|VI 0.063 . SPAC6G9.08 47 RQKVIVK|GG 0.063 . SPAC6G9.08 52 VKGGQLK|DD 0.063 . SPAC6G9.08 63 LGSVGIK|PN 0.075 . SPAC6G9.08 120 STVQMLR|AI 0.077 . SPAC6G9.08 143 GLVAEYR|TL 0.086 . SPAC6G9.08 159 APVTPMR|FL 0.108 . SPAC6G9.08 165 RFLQSLR|ME 0.087 . SPAC6G9.08 176 QFAEMSR|ET 0.104 . SPAC6G9.08 199 LLSVLQR|SL 0.204 . SPAC6G9.08 208 SSEWVQK|NM 0.070 . SPAC6G9.08 213 QKNMAGK|LL 0.092 . SPAC6G9.08 219 KLLSTMK|CD 0.065 . SPAC6G9.08 261 LEGLTQK|IS 0.058 . SPAC6G9.08 264 LTQKISK|HS 0.069 . SPAC6G9.08 271 HSDVLNR|DA 0.148 . SPAC6G9.08 277 RDAMYSK|IS 0.063 . SPAC6G9.08 280 MYSKISR|IS 0.073 . SPAC6G9.08 283 KISRISR|LP 0.191 . SPAC6G9.08 294 LTVNFVR|FY 0.103 . SPAC6G9.08 298 FVRFYWK|AS 0.067 . SPAC6G9.08 303 WKASIGK|KA 0.069 . SPAC6G9.08 304 KASIGKK|AK 0.087 . SPAC6G9.08 306 SIGKKAK|IL 0.088 . SPAC6G9.08 309 KKAKILR|KV 0.113 . SPAC6G9.08 310 KAKILRK|VK 0.083 . SPAC6G9.08 312 KILRKVK|FP 0.111 . SPAC6G9.08 330 TPELSQK|LI 0.061 . SPAC6G9.08 335 QKLIPVR|DK 0.087 . SPAC6G9.08 337 LIPVRDK|LR 0.062 . SPAC6G9.08 339 PVRDKLR|EI 0.105 . SPAC6G9.08 343 KLREIEK|ND 0.072 . SPAC6G9.08 350 NDEEHER|AA 0.120 . SPAC6G9.08 353 EHERAAK|RI 0.113 . SPAC6G9.08 354 HERAAKR|IK 0.172 . SPAC6G9.08 356 RAAKRIK|IQ 0.062 . SPAC6G9.08 364 QPSEDEK|EA 0.084 . SPAC6G9.08 371 EAEAECR|LT 0.101 . SPAC6G9.08 421 HYQAWIR|NS 0.077 . SPAC6G9.08 426 IRNSNNR|AE 0.105 . SPAC6G9.08 431 NRAEWFR|FN 0.171 . SPAC6G9.08 436 FRFNDAK|VS 0.064 . SPAC6G9.08 444 SIVPAEK|IE 0.056 . SPAC6G9.08 463 AYILLYK|AK 0.065 . SPAC6G9.08 465 ILLYKAK|DI 0.088 . ____________________________^_________________

  • Fasta :-

    >SPAC6G9.08 TGAGTATATAGCTCGTTACTGTATGGCCTTCACCAAGTACCAGCAACATATATAATAAGT ATAATTTGCAAAGAATTACAAAAAAAATTATATTGGGCTTAAACAAGTATTTCTTTCATT AATTACAAAAACCATTTATGATGATTCCCATAGCAATTCGTTGGCAAGGGAAGAAGTACG ACTTAGAGATTGAACCTAATGAAACAGGAAGCACCTTGAAACATCAACTATACTCGTTGA CACAAGTTCCTCCGGAACGACAGAAAGTGATTGTCAAAGGTGGCCAGCTTAAAGACGATG TTTTGCTTGGTTCAGTTGGTATTAAACCAAATGCAACTTTATTAATGATGGGTACTGCAG GCGAACTACCAACAGCTATGCCCATTCCAGCTGTCGAGTCAGTAGAACAAGAGGAATCTG AAGATGATGGCTATCCGTCAGGGCTTATAAACTTAGGCAACACGTGTTACATGAATTCTA CAGTTCAAATGCTGCGTGCCATTCCAGAATTATCAGACGCTGTCTCACAATTCAATTCCT CTGGGGGTTTGGTGGCAGAATATCGGACGTTATTAAATTCTATGCAATCTAATGCTCCGG TTACACCAATGAGGTTTCTTCAAAGTCTACGCATGGAGTATCCACAGTTTGCAGAAATGA GTAGAGAAACTGGGGGTTATGCTCAACAGGATGCTGAGGAATGCTGGTCATTCTTGCTAT CAGTTTTACAGCGCTCCCTATCATCTGAGTGGGTACAAAAAAATATGGCTGGAAAACTTT TATCTACTATGAAATGTGATGAAAACGAAGTACAGGAGCAACCCTCTATTTCACATGATA CGTTTTTGAGTTTACCTTGCCATATCTCTATGCATACAAGCTATATGACCCAGGGGATCC TTGAAGGGCTTACGCAAAAAATTTCTAAGCATAGTGATGTATTAAATCGTGATGCCATGT ATAGCAAAATCTCAAGGATTTCTCGACTACCCAATTATTTAACTGTTAATTTTGTTCGAT TTTACTGGAAAGCATCAATAGGGAAAAAGGCTAAAATTCTTCGTAAGGTTAAGTTTCCAT TTGAGCTCGATGCAGTCGAGTTTTGTACTCCTGAACTTTCACAAAAATTGATTCCCGTAC GTGACAAATTACGTGAAATTGAAAAAAATGATGAAGAACATGAGCGAGCTGCTAAGCGTA TCAAAATTCAACCTTCAGAGGACGAGAAGGAGGCGGAAGCTGAGTGCAGGCTTACTCAGG TTGCGACGTGTCAATCACTAGTAGATCCTGAGCTCGCTGATGATGAAGGAGCCAACCCCA CCGGCCTTTATGATTTAGTCGGGGTTTTATCACACGCCGGTGCTAGTGCATCTTCAGGCC ATTACCAAGCTTGGATAAGAAATAGCAATAATCGTGCTGAATGGTTCAGGTTCAATGACG CAAAGGTATCTATCGTTCCTGCTGAAAAAATTGAAACTCTCGATGGTGGTGGTGAAGCTG ACAGTGCCTACATCCTTCTTTATAAGGCAAAAGACATTGCATGAGCTTACGATTTCTTTA TTTTTTTTTAAAACCTTCTTTTGACTGTTTATTATGGGAAAAGAACTAGAACGTATCATA TCAAAGTGGCATTGTTTACTCTCACGTTTTAATAGAAGGGCTGGGTCATGATTTATGTAA GATAAAAACGCTCAAAATATTATTCCAGTAAACAGTTGCATTTATTTACGTGCTTTATTC TATATTATTCTGAAGCAACAAATAAGATACCCAACGTATGAATACTATTTCCTTTACCTT TACACATATACCACAATACTTTCATGCACAACAAACACTAGCATCAATTAAGAAATTGAA ATCTATAGATGTACAAAACTTTCTTATTATTAGAAGACGTGTTTTATTTAATGGCGAGCA GCAGCCTTGGCATTCTTAATAGCTTGGCCACGAGCGGAACTGGCAGCGGACTTGGCCTTG ATGGCCTTCTTTTCAGACTCAGAAGCGGCCTTCTTATCCTTACGTTGCTTCAAAGCAGCA GCACGGGCAGCAGCACGAACTTCAGGGCGTTGGTTACGCTTCTCCTTAATGACATCCAAG TTAGCACCAACAATTCCACGTTGGTGCTTGACGGTACGACGGGTACGCTTCTTGGCATGC TCCTCAGAGATACCCTTCTTGTGCATACGACGGTATAAAACAGTCCAAGACAAACGACGA GGATTCTTGCGTTGTAAGAAAAGGCTTTCAGACTTCTTGTTGACAAAGCGGAAAACCTTG TTGTCCCCACGGACGAAAAGTCTTCCAGCGCCAGGATAAACCTTGGATCCAGAAAATGAG CAAACTTCCACCTTCATCGTGTCTTGGTTTGTGTAATGTTGTGAAGAATAATGGTTTTCA ATGTTTCATCTGTTGTCCTATGCCTAAAATATACAGTCACTTACCCTACCCTAAAACAAC AGGGCTTTTACAATCACTTTAAGCAACCATAAAGCATTTTATTCAAAAGTTATATACAAA TTAATTAATTTGAGAAAAATGTAATCAACACTGGAATCATCGAATTTTAATCAATTGGCC TTCTTCACCTATTATAGACTGTTTAGGGGTAGAATTAAGAAAACAGTTCAAAACTCAATA TATTCAGCTATATACAGAA
  • Download Fasta

  • Fasta :-

    MMIPIAIRWQGKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSV GIKPNATLLMMGTAGELPTAMPIPAVESVEQEESEDDGYPSGLINLGNTCYMNSTVQMLR AIPELSDAVSQFNSSGGLVAEYRTLLNSMQSNAPVTPMRFLQSLRMEYPQFAEMSRETGG YAQQDAEECWSFLLSVLQRSLSSEWVQKNMAGKLLSTMKCDENEVQEQPSISHDTFLSLP CHISMHTSYMTQGILEGLTQKISKHSDVLNRDAMYSKISRISRLPNYLTVNFVRFYWKAS IGKKAKILRKVKFPFELDAVEFCTPELSQKLIPVRDKLREIEKNDEEHERAAKRIKIQPS EDEKEAEAECRLTQVATCQSLVDPELADDEGANPTGLYDLVGVLSHAGASASSGHYQAWI RNSNNRAEWFRFNDAKVSIVPAEKIETLDGGGEADSAYILLYKAKDIA

  • title: Active Site
  • coordinates: N105,C110,H415,D434
No Results
No Results
IDSitePeptideScoreMethod
SPAC6G9.08360 SKIQPSEDEK0.992unsp

SPAC6G9.08      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India