SPAC959.06c | conserved fungal protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005575      

  • Curated_GO_Components:  cellular_component      

  • Curated_GO_Function_IDs:  GO:0003824      

  • Curated_GO_Functions:  catalytic activity      

  • Curated_GO_Processes:  biological_process      

_IDPredictionOTHERSPmTPCS_Position
SPAC959.06cOTHER0.9991860.0007780.000036
No Results

  • Fasta :-

    >SPAC959.06c MGENIEISTKVIENQEIRFRCYKADSTKIAVLAHPYAFLGGSVDDINIIALSKKINSKGF TVYVLDATTRRSALLSGKHDTMIFTLFVKYITSLNHPEYLLLGGYSYGARISMHKSITLA IDKRISHVSYLFLAPYLGLGSSILSWSWGLGFESFSTDSKVLFVWPDNDEFTREGTFETT LAKLKNRCPETTPLKLTDCSHMLSPSSRKILLETVDKWLASALNV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/241 Sequence name : 241 Sequence length : 225 VALUES OF COMPUTED PARAMETERS Coef20 : 3.741 CoefTot : -0.250 ChDiff : 3 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.635 1.465 0.249 0.640 MesoH : 0.191 0.515 -0.223 0.326 MuHd_075 : 19.325 19.114 6.296 6.842 MuHd_095 : 31.029 14.405 7.766 5.626 MuHd_100 : 28.994 12.087 7.358 4.593 MuHd_105 : 24.650 11.164 6.677 2.490 Hmax_075 : -0.087 10.675 -0.835 4.322 Hmax_095 : -1.312 6.387 -1.538 3.316 Hmax_100 : 4.200 7.300 -0.406 2.950 Hmax_105 : 8.300 5.500 0.222 2.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6178 0.3822 DFMC : 0.7830 0.2170
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 225 SPAC959.06c MGENIEISTKVIENQEIRFRCYKADSTKIAVLAHPYAFLGGSVDDINIIALSKKINSKGFTVYVLDATTRRSALLSGKHD 80 TMIFTLFVKYITSLNHPEYLLLGGYSYGARISMHKSITLAIDKRISHVSYLFLAPYLGLGSSILSWSWGLGFESFSTDSK 160 VLFVWPDNDEFTREGTFETTLAKLKNRCPETTPLKLTDCSHMLSPSSRKILLETVDKWLASALNV 240 ................................................................................ 80 ................................................................................ 160 ................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC959.06c 10 NIEISTK|VI 0.070 . SPAC959.06c 18 IENQEIR|FR 0.095 . SPAC959.06c 20 NQEIRFR|CY 0.075 . SPAC959.06c 23 IRFRCYK|AD 0.201 . SPAC959.06c 28 YKADSTK|IA 0.069 . SPAC959.06c 53 NIIALSK|KI 0.065 . SPAC959.06c 54 IIALSKK|IN 0.162 . SPAC959.06c 58 SKKINSK|GF 0.072 . SPAC959.06c 70 VLDATTR|RS 0.063 . SPAC959.06c 71 LDATTRR|SA 0.266 . SPAC959.06c 78 SALLSGK|HD 0.065 . SPAC959.06c 89 IFTLFVK|YI 0.062 . SPAC959.06c 110 GYSYGAR|IS 0.099 . SPAC959.06c 115 ARISMHK|SI 0.087 . SPAC959.06c 123 ITLAIDK|RI 0.059 . SPAC959.06c 124 TLAIDKR|IS 0.203 . SPAC959.06c 160 SFSTDSK|VL 0.063 . SPAC959.06c 173 DNDEFTR|EG 0.074 . SPAC959.06c 183 FETTLAK|LK 0.059 . SPAC959.06c 185 TTLAKLK|NR 0.059 . SPAC959.06c 187 LAKLKNR|CP 0.091 . SPAC959.06c 195 PETTPLK|LT 0.057 . SPAC959.06c 208 MLSPSSR|KI 0.116 . SPAC959.06c 209 LSPSSRK|IL 0.074 . SPAC959.06c 217 LLETVDK|WL 0.068 . ____________________________^_________________

  • Fasta :-

    >SPAC959.06c ATGGGTGAAAACATTGAAATATCGACTAAAGTCATAGAAAATCAAGAAATTCGTTTTCGA TGTTACAAAGCTGACTCTACCAAAATCGCAGTTTTGGCTCATCCCTATGCTTTTCTTGGT GGCTCCGTTGACGACATCAATATCATTGCCTTGTCAAAAAAAATAAATTCCAAAGGATTC ACTGTTTACGTCCTTGATGCTACAACTAGACGTTCTGCTTTGCTGAGTGGTAAACATGAT ACGATGATATTTACCTTGTTTGTGAAGTATATAACTAGTTTGAATCATCCGGAATATCTT TTGTTGGGAGGATATTCTTACGGTGCAAGAATCAGTATGCATAAATCTATAACCCTAGCA ATTGATAAGCGCATTTCTCATGTCTCATATCTTTTTCTTGCACCGTATTTGGGACTTGGA AGCAGTATTTTAAGTTGGTCTTGGGGGCTAGGCTTTGAATCTTTTTCTACTGATTCAAAA GTATTGTTTGTTTGGCCTGATAATGATGAGTTTACTAGAGAGGGAACCTTTGAAACGACG CTGGCAAAACTAAAAAATCGTTGCCCAGAAACTACTCCTTTAAAACTTACAGATTGCTCC CACATGCTTTCACCATCCTCAAGAAAGATTCTTTTAGAAACTGTGGACAAATGGTTAGCT TCTGCCCTCAATGTGTGA
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  • Fasta :-

    MGENIEISTKVIENQEIRFRCYKADSTKIAVLAHPYAFLGGSVDDINIIALSKKINSKGF TVYVLDATTRRSALLSGKHDTMIFTLFVKYITSLNHPEYLLLGGYSYGARISMHKSITLA IDKRISHVSYLFLAPYLGLGSSILSWSWGLGFESFSTDSKVLFVWPDNDEFTREGTFETT LAKLKNRCPETTPLKLTDCSHMLSPSSRKILLETVDKWLASALNV

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SPAC959.06c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India