SPAP14E8.04 | metallopeptidase Oma1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAP14E8.04mTP0.2327480.0001860.767066CS pos: 40-41. ARF-QS. Pr: 0.2163
No Results

  • Fasta :-

    >SPAP14E8.04 MFLNKYISNYSRTRAVSCAPVLSYKKCSYRNFNGLLQARFQSNNLSWSNRNRVVYKSFQP NPRDKRFQWIFGALIAGGGVYYFTHLEYVPISNRRRFNDVSLDFEKRMAQDAYKEVMSEY GDRMLPSYHPTTLYVSRVLKRIIAVSGMSDLKWELHVIRDPTPNAFVLPGGKVFVFEGIL PMCKGEDGLAAVLAHETAHQVARHSAEKIAFTRAVSCIVFLAAASLDLSGQLSHFLLNFG LLLPFSRKMETEADYIGLMLMSQACFDPNAAKTLWERMDAAEGQMGKALAFASTHPSSKK RIRKIEEWLPEAQVKRETSDCYHETWPMLQSFKEVHW
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/572 Sequence name : 572 Sequence length : 337 VALUES OF COMPUTED PARAMETERS Coef20 : 4.511 CoefTot : -2.329 ChDiff : 11 ZoneTo : 86 KR : 13 DE : 1 CleavSite : 52 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.547 1.853 0.299 0.720 MesoH : 0.000 0.765 -0.225 0.327 MuHd_075 : 34.368 24.547 10.659 7.434 MuHd_095 : 30.275 18.587 8.627 6.651 MuHd_100 : 31.040 18.373 7.644 7.087 MuHd_105 : 30.060 18.275 7.926 7.089 Hmax_075 : 0.117 9.217 -1.055 2.590 Hmax_095 : -7.800 4.400 0.986 0.210 Hmax_100 : 3.100 8.600 0.924 2.530 Hmax_105 : -0.933 9.217 -0.195 2.847 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0521 0.9479 DFMC : 0.0270 0.9730 This protein is probably imported in mitochondria. f(Ser) = 0.1047 f(Arg) = 0.0930 CMi = 0.52265 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 337 SPAP14E8.04 MFLNKYISNYSRTRAVSCAPVLSYKKCSYRNFNGLLQARFQSNNLSWSNRNRVVYKSFQPNPRDKRFQWIFGALIAGGGV 80 YYFTHLEYVPISNRRRFNDVSLDFEKRMAQDAYKEVMSEYGDRMLPSYHPTTLYVSRVLKRIIAVSGMSDLKWELHVIRD 160 PTPNAFVLPGGKVFVFEGILPMCKGEDGLAAVLAHETAHQVARHSAEKIAFTRAVSCIVFLAAASLDLSGQLSHFLLNFG 240 LLLPFSRKMETEADYIGLMLMSQACFDPNAAKTLWERMDAAEGQMGKALAFASTHPSSKKRIRKIEEWLPEAQVKRETSD 320 CYHETWPMLQSFKEVHW 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAP14E8.04 5 --MFLNK|YI 0.079 . SPAP14E8.04 12 YISNYSR|TR 0.076 . SPAP14E8.04 14 SNYSRTR|AV 0.148 . SPAP14E8.04 25 APVLSYK|KC 0.062 . SPAP14E8.04 26 PVLSYKK|CS 0.075 . SPAP14E8.04 30 YKKCSYR|NF 0.100 . SPAP14E8.04 39 NGLLQAR|FQ 0.108 . SPAP14E8.04 50 NLSWSNR|NR 0.086 . SPAP14E8.04 52 SWSNRNR|VV 0.218 . SPAP14E8.04 56 RNRVVYK|SF 0.121 . SPAP14E8.04 63 SFQPNPR|DK 0.108 . SPAP14E8.04 65 QPNPRDK|RF 0.077 . SPAP14E8.04 66 PNPRDKR|FQ 0.466 . SPAP14E8.04 94 YVPISNR|RR 0.061 . SPAP14E8.04 95 VPISNRR|RF 0.122 . SPAP14E8.04 96 PISNRRR|FN 0.272 . SPAP14E8.04 106 VSLDFEK|RM 0.055 . SPAP14E8.04 107 SLDFEKR|MA 0.250 . SPAP14E8.04 114 MAQDAYK|EV 0.081 . SPAP14E8.04 123 MSEYGDR|ML 0.097 . SPAP14E8.04 137 TTLYVSR|VL 0.095 . SPAP14E8.04 140 YVSRVLK|RI 0.164 . SPAP14E8.04 141 VSRVLKR|II 0.239 . SPAP14E8.04 152 SGMSDLK|WE 0.060 . SPAP14E8.04 159 WELHVIR|DP 0.097 . SPAP14E8.04 172 FVLPGGK|VF 0.049 . SPAP14E8.04 184 GILPMCK|GE 0.057 . SPAP14E8.04 203 TAHQVAR|HS 0.147 . SPAP14E8.04 208 ARHSAEK|IA 0.073 . SPAP14E8.04 213 EKIAFTR|AV 0.151 . SPAP14E8.04 247 LLLPFSR|KM 0.086 . SPAP14E8.04 248 LLPFSRK|ME 0.074 . SPAP14E8.04 272 FDPNAAK|TL 0.063 . SPAP14E8.04 277 AKTLWER|MD 0.089 . SPAP14E8.04 287 AEGQMGK|AL 0.066 . SPAP14E8.04 299 STHPSSK|KR 0.064 . SPAP14E8.04 300 THPSSKK|RI 0.151 . SPAP14E8.04 301 HPSSKKR|IR 0.321 . SPAP14E8.04 303 SSKKRIR|KI 0.173 . SPAP14E8.04 304 SKKRIRK|IE 0.262 . SPAP14E8.04 315 LPEAQVK|RE 0.060 . SPAP14E8.04 316 PEAQVKR|ET 0.297 . SPAP14E8.04 333 PMLQSFK|EV 0.077 . ____________________________^_________________

  • Fasta :-

    >SPAP14E8.04 CTCGAGACACGTTTGTTAAAATTAATATCGTTAGCGATTATCCTTTCGTATACCATAATA CACCAAACTATCCTCCATTCTCATCTTTTTAAATATCTAGCGCCAATATTTAGTAATTCC TATAAGAATTATTTAATGTTTTTAAATAAGTATATATCAAACTATTCCAGAACCAGGGCT GTGAGCTGCGCTCCAGTTCTATCATACAAGAAATGTAGTTATCGAAATTTCAATGGTTTA TTACAGGCAAGATTTCAAAGCAACAACTTGAGTTGGTCCAATAGAAACAGAGTGGTATAT AAATCATTTCAGCCCAATCCTAGAGACAAGAGGTTTCAATGGATTTTTGGTGCTCTTATT GCAGGAGGAGGTGTATACTATTTTACACATTTGGAATACGTTCCTATAAGTAACCGTCGA AGGTTTAATGATGTTTCTTTAGATTTTGAAAAGCGAATGGCACAAGACGCCTACAAAGAA GTAATGTCTGAGTACGGAGACCGTATGTTACCAAGTTACCATCCTACTACCCTTTATGTT TCACGTGTCCTTAAAAGAATTATAGCTGTTTCTGGTATGTCTGATTTGAAATGGGAGTTA CATGTAATTCGAGACCCCACACCTAATGCGTTCGTCTTACCCGGAGGGAAGGTCTTTGTA TTCGAAGGTATTCTCCCAATGTGTAAAGGAGAAGATGGTCTAGCTGCTGTCCTTGCCCAT GAAACTGCACATCAGGTAGCCCGACATTCTGCAGAGAAGATAGCTTTTACAAGGGCAGTA TCCTGTATTGTGTTCCTGGCAGCTGCTTCTCTTGACCTTTCCGGTCAACTTTCTCATTTT CTCTTGAACTTTGGCTTATTGCTTCCATTTTCACGTAAGATGGAAACCGAAGCTGACTAC ATTGGGCTTATGTTGATGAGCCAAGCATGTTTCGATCCCAATGCAGCAAAAACGTTATGG GAGCGCATGGATGCTGCTGAAGGGCAAATGGGAAAGGCTCTTGCGTTTGCTAGTACTCAC CCTTCAAGTAAAAAGAGAATCCGTAAAATTGAGGAATGGCTTCCGGAAGCTCAAGTAAAA AGAGAAACAAGCGATTGTTATCATGAAACTTGGCCTATGCTACAGTCTTTTAAAGAAGTA CATTGGTAATTGTTTTTTAAATAATTATCATCATTGCAGTACTATTTATTTTTTTTACGG CCAACTTGTTATGTATAAAACTTCAAATTTAGATTTACATTTTCGAGAAGTTCATATGTA TTTGAAGCTATGTATAGTATTAATGAATCTGTTTTTACAAAAAATTATTCA
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  • Fasta :-

    MFLNKYISNYSRTRAVSCAPVLSYKKCSYRNFNGLLQARFQSNNLSWSNRNRVVYKSFQP NPRDKRFQWIFGALIAGGGVYYFTHLEYVPISNRRRFNDVSLDFEKRMAQDAYKEVMSEY GDRMLPSYHPTTLYVSRVLKRIIAVSGMSDLKWELHVIRDPTPNAFVLPGGKVFVFEGIL PMCKGEDGLAAVLAHETAHQVARHSAEKIAFTRAVSCIVFLAAASLDLSGQLSHFLLNFG LLLPFSRKMETEADYIGLMLMSQACFDPNAAKTLWERMDAAEGQMGKALAFASTHPSSKK RIRKIEEWLPEAQVKRETSDCYHETWPMLQSFKEVHW

    No Results
  • title: Zn binding site
  • coordinates: H195,H199,E250,H295
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAP14E8.04205 SVARHSAEKI0.992unspSPAP14E8.04298 STHPSSKKRI0.997unsp

SPAP14E8.04      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India