SPBC1198.08 | dipeptidase Dug1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC1198.08OTHER0.9987080.0004670.000825
No Results

  • Fasta :-

    >SPBC1198.08 MKMSLDKLYEVIDKKKDEFVTRLSRAVSIPSVSADVTLRPKVVEMADFVVSEFTKLGAKM EKRDIGYHQMDGQDVPLPPIVLGQYGNDPSKKTVLIYNHFDVQPASLEDGWSTDPFTLTV DNKGRMFGRGATDDKGPLIGWISAIEAHKELGIDFPVNLLMCFEGMEEYGSEGLEDLIRA EAEKYFAKADCVCISDTYWLGTKKPVLTYGLRGVCYFNITVEGPSADLHSGVFGGTVHEP MTDLVAIMSTLVKPNGEILIPGIMDQVAELTPTEDSIYDGIDYTMEDLKEAVGADISIYP DPKRTLQHRWRYPTLSLHGIEGAFSGSGAKTVIPAKVIGKFSIRTVPNMESETVERLVKE HVTKVFNSLNSKNKLAFNNMHSGSWWISSPDHWHYDVGKKATERVYGITPDFVREGGSIP VTVTFEQSLKKNVLLLPMGRGDDGAHSINEKLDLDNFLKGIKLFCTYVHELASVSP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/119 Sequence name : 119 Sequence length : 476 VALUES OF COMPUTED PARAMETERS Coef20 : 3.325 CoefTot : 0.121 ChDiff : -16 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.659 1.329 0.047 0.489 MesoH : -0.076 0.460 -0.221 0.308 MuHd_075 : 10.629 1.927 3.475 1.660 MuHd_095 : 45.299 24.765 12.209 6.902 MuHd_100 : 41.045 23.871 10.551 6.515 MuHd_105 : 30.816 20.290 7.672 5.459 Hmax_075 : -16.700 -1.100 -5.437 0.420 Hmax_095 : 3.200 8.000 -1.148 2.820 Hmax_100 : 6.500 13.500 -0.041 3.660 Hmax_105 : -6.200 4.900 -4.025 1.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9526 0.0474 DFMC : 0.9503 0.0497
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 476 SPBC1198.08 MKMSLDKLYEVIDKKKDEFVTRLSRAVSIPSVSADVTLRPKVVEMADFVVSEFTKLGAKMEKRDIGYHQMDGQDVPLPPI 80 VLGQYGNDPSKKTVLIYNHFDVQPASLEDGWSTDPFTLTVDNKGRMFGRGATDDKGPLIGWISAIEAHKELGIDFPVNLL 160 MCFEGMEEYGSEGLEDLIRAEAEKYFAKADCVCISDTYWLGTKKPVLTYGLRGVCYFNITVEGPSADLHSGVFGGTVHEP 240 MTDLVAIMSTLVKPNGEILIPGIMDQVAELTPTEDSIYDGIDYTMEDLKEAVGADISIYPDPKRTLQHRWRYPTLSLHGI 320 EGAFSGSGAKTVIPAKVIGKFSIRTVPNMESETVERLVKEHVTKVFNSLNSKNKLAFNNMHSGSWWISSPDHWHYDVGKK 400 ATERVYGITPDFVREGGSIPVTVTFEQSLKKNVLLLPMGRGDDGAHSINEKLDLDNFLKGIKLFCTYVHELASVSP 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC1198.08 2 -----MK|MS 0.071 . SPBC1198.08 7 MKMSLDK|LY 0.067 . SPBC1198.08 14 LYEVIDK|KK 0.059 . SPBC1198.08 15 YEVIDKK|KD 0.081 . SPBC1198.08 16 EVIDKKK|DE 0.103 . SPBC1198.08 22 KDEFVTR|LS 0.085 . SPBC1198.08 25 FVTRLSR|AV 0.207 . SPBC1198.08 39 SADVTLR|PK 0.079 . SPBC1198.08 41 DVTLRPK|VV 0.068 . SPBC1198.08 55 VVSEFTK|LG 0.065 . SPBC1198.08 59 FTKLGAK|ME 0.054 . SPBC1198.08 62 LGAKMEK|RD 0.064 . SPBC1198.08 63 GAKMEKR|DI 0.429 . SPBC1198.08 91 YGNDPSK|KT 0.066 . SPBC1198.08 92 GNDPSKK|TV 0.146 . SPBC1198.08 123 TLTVDNK|GR 0.070 . SPBC1198.08 125 TVDNKGR|MF 0.137 . SPBC1198.08 129 KGRMFGR|GA 0.141 . SPBC1198.08 135 RGATDDK|GP 0.061 . SPBC1198.08 149 SAIEAHK|EL 0.070 . SPBC1198.08 179 GLEDLIR|AE 0.082 . SPBC1198.08 184 IRAEAEK|YF 0.074 . SPBC1198.08 188 AEKYFAK|AD 0.073 . SPBC1198.08 203 TYWLGTK|KP 0.049 . SPBC1198.08 204 YWLGTKK|PV 0.101 . SPBC1198.08 212 VLTYGLR|GV 0.090 . SPBC1198.08 253 IMSTLVK|PN 0.078 . SPBC1198.08 289 YTMEDLK|EA 0.061 . SPBC1198.08 303 SIYPDPK|RT 0.062 . SPBC1198.08 304 IYPDPKR|TL 0.121 . SPBC1198.08 309 KRTLQHR|WR 0.102 . SPBC1198.08 311 TLQHRWR|YP 0.129 . SPBC1198.08 330 FSGSGAK|TV 0.073 . SPBC1198.08 336 KTVIPAK|VI 0.066 . SPBC1198.08 340 PAKVIGK|FS 0.069 . SPBC1198.08 344 IGKFSIR|TV 0.114 . SPBC1198.08 356 ESETVER|LV 0.102 . SPBC1198.08 359 TVERLVK|EH 0.105 . SPBC1198.08 364 VKEHVTK|VF 0.060 . SPBC1198.08 372 FNSLNSK|NK 0.062 . SPBC1198.08 374 SLNSKNK|LA 0.088 . SPBC1198.08 399 WHYDVGK|KA 0.073 . SPBC1198.08 400 HYDVGKK|AT 0.113 . SPBC1198.08 404 GKKATER|VY 0.098 . SPBC1198.08 414 ITPDFVR|EG 0.091 . SPBC1198.08 430 TFEQSLK|KN 0.060 . SPBC1198.08 431 FEQSLKK|NV 0.095 . SPBC1198.08 440 LLLPMGR|GD 0.083 . SPBC1198.08 451 AHSINEK|LD 0.060 . SPBC1198.08 459 DLDNFLK|GI 0.057 . SPBC1198.08 462 NFLKGIK|LF 0.056 . ____________________________^_________________

  • Fasta :-

    >SPBC1198.08 TTCCTCTAGCAGCGCAGAAGAACGTGCCCTTATCAGAACTCTTTTTTTATCTCGTTTGAT GAAAATGTCTTTGGATAAGTTATACGAAGTTATAGATAAGAAGAAGGATGAGTTTGTTAC TAGGCTTTCACGGGCAGTTTCTATACCTTCTGTCTCTGCCGATGTAACGCTTCGTCCCAA AGTTGTAGAGATGGCTGACTTTGTGGTTAGTGAGTTCACAAAGTTGGGAGCCAAGATGGA GAAGCGTGATATTGGTTATCATCAAATGGATGGACAAGACGTTCCTCTGCCACCTATTGT TCTCGGTCAATACGGAAATGACCCTTCTAAAAAGACTGTTTTAATTTATAATCACTTTGA TGTTCAGCCGGCTTCATTAGAAGATGGATGGAGTACTGACCCTTTCACGTTGACAGTTGA CAATAAAGGACGCATGTTTGGTCGCGGTGCTACTGATGATAAAGGACCGCTCATTGGATG GATTTCGGCCATTGAAGCTCACAAAGAACTTGGTATTGATTTTCCAGTAAACTTACTCAT GTGTTTTGAAGGAATGGAGGAATACGGCAGTGAAGGTTTAGAAGATTTAATTCGTGCAGA AGCTGAAAAGTACTTTGCTAAAGCAGATTGTGTTTGCATCAGCGATACTTATTGGTTGGG TACCAAAAAGCCAGTTTTAACTTACGGCCTCCGTGGTGTTTGTTACTTTAATATTACTGT CGAAGGACCATCTGCTGATCTGCACTCTGGCGTTTTTGGCGGTACTGTGCATGAGCCTAT GACGGACTTAGTTGCTATCATGAGTACTTTAGTTAAACCCAATGGTGAAATTTTGATTCC TGGTATCATGGACCAAGTAGCAGAACTCACACCTACCGAGGATAGTATTTATGATGGAAT TGATTATACAATGGAAGATTTGAAAGAGGCGGTCGGTGCTGATATTTCTATTTATCCCGA TCCCAAGAGAACACTTCAACATCGCTGGAGATATCCTACACTTTCACTTCATGGTATTGA AGGTGCCTTTAGTGGCAGTGGTGCTAAAACGGTTATTCCCGCGAAAGTTATTGGTAAATT TTCCATTCGCACCGTCCCCAATATGGAGTCAGAAACTGTTGAACGACTTGTTAAAGAACA TGTAACAAAGGTTTTCAACTCTTTGAACTCGAAAAACAAGCTCGCTTTTAACAACATGCA CTCTGGAAGTTGGTGGATTTCTTCTCCTGACCACTGGCATTATGATGTCGGTAAAAAAGC CACTGAGCGTGTTTACGGTATAACCCCAGATTTCGTTCGTGAAGGCGGTTCTATTCCAGT AACTGTTACTTTTGAGCAATCTTTGAAGAAAAATGTTTTGTTGTTGCCTATGGGCCGTGG TGATGACGGTGCCCACAGTATCAATGAGAAATTAGACCTTGATAACTTCCTTAAGGGCAT AAAACTTTTCTGTACTTATGTTCATGAGTTGGCTTCTGTTTCTCCTTAAAATCCCTTTCG ATTTAGCGTTAAGTTAATACTATCATGATATTGGTGTGTTTACTTTGTATTGGTAGATTC TGTACGTTAAATATTATAAATCTTGTTATTCGAAATTATTTACGCATTCTTTTAATGAAT AAACTTTGTCATTGAATCCGAGTAATATGCGCTTGCGAGCCTT
  • Download Fasta

  • Fasta :-

    MKMSLDKLYEVIDKKKDEFVTRLSRAVSIPSVSADVTLRPKVVEMADFVVSEFTKLGAKM EKRDIGYHQMDGQDVPLPPIVLGQYGNDPSKKTVLIYNHFDVQPASLEDGWSTDPFTLTV DNKGRMFGRGATDDKGPLIGWISAIEAHKELGIDFPVNLLMCFEGMEEYGSEGLEDLIRA EAEKYFAKADCVCISDTYWLGTKKPVLTYGLRGVCYFNITVEGPSADLHSGVFGGTVHEP MTDLVAIMSTLVKPNGEILIPGIMDQVAELTPTEDSIYDGIDYTMEDLKEAVGADISIYP DPKRTLQHRWRYPTLSLHGIEGAFSGSGAKTVIPAKVIGKFSIRTVPNMESETVERLVKE HVTKVFNSLNSKNKLAFNNMHSGSWWISSPDHWHYDVGKKATERVYGITPDFVREGGSIP VTVTFEQSLKKNVLLLPMGRGDDGAHSINEKLDLDNFLKGIKLFCTYVHELASVSP

  • title: metal binding site
  • coordinates: H99,D133,E167,E168,D196,H446
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC1198.08106 SVQPASLEDG0.995unspSPBC1198.08276 SPTEDSIYDG0.996unsp

SPBC1198.08      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India