SPBC1709.14 | peptide N-glycanase

_IDPredictionOTHERSPmTPCS_Position
SPBC1709.14OTHER0.9986830.0001460.001170
No Results

  • Fasta :-

    >SPBC1709.14 MDFHAISQRFIDMMRSKNSQNASQPPETYPFYHEVRQMSQHPWMYEDPELQDYALSILPL DKLFQDASELEKEGDGSWGYQDYVIQALLKWFKREFFVWVNQPPCEKCGGETHMTGNGPP NEEEKWNGVRNVELYQCNVCGHNQRFPRYNRIRALLDSRKGRCGEWANCFTFLCRALGSR ARWIWNAEDHVWTEVYSNKQQRWVHVDSGEESFDEPLIYEQGWGKKMSYCLGFGIDSVRD VSHRYIRHPENGLPRDRCPESVLQQALHEINIEFRSRLTDSERKALEEEDKREKDELDGY MRPVSQATPTNTDLPARQTGNVEWKEKRGEAGK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/618 Sequence name : 618 Sequence length : 333 VALUES OF COMPUTED PARAMETERS Coef20 : 4.187 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.153 0.812 0.007 0.332 MesoH : -1.522 -0.451 -0.674 0.061 MuHd_075 : 18.093 17.357 7.610 4.083 MuHd_095 : 18.210 13.534 4.556 4.769 MuHd_100 : 26.090 14.785 5.286 5.553 MuHd_105 : 35.588 16.542 6.997 6.410 Hmax_075 : 3.383 12.833 0.027 3.220 Hmax_095 : 3.150 7.612 -1.293 3.482 Hmax_100 : 9.100 9.200 -1.018 3.400 Hmax_105 : 9.100 9.200 -1.018 3.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7480 0.2520 DFMC : 0.8710 0.1290
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 333 SPBC1709.14 MDFHAISQRFIDMMRSKNSQNASQPPETYPFYHEVRQMSQHPWMYEDPELQDYALSILPLDKLFQDASELEKEGDGSWGY 80 QDYVIQALLKWFKREFFVWVNQPPCEKCGGETHMTGNGPPNEEEKWNGVRNVELYQCNVCGHNQRFPRYNRIRALLDSRK 160 GRCGEWANCFTFLCRALGSRARWIWNAEDHVWTEVYSNKQQRWVHVDSGEESFDEPLIYEQGWGKKMSYCLGFGIDSVRD 240 VSHRYIRHPENGLPRDRCPESVLQQALHEINIEFRSRLTDSERKALEEEDKREKDELDGYMRPVSQATPTNTDLPARQTG 320 NVEWKEKRGEAGK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC1709.14 9 FHAISQR|FI 0.129 . SPBC1709.14 15 RFIDMMR|SK 0.114 . SPBC1709.14 17 IDMMRSK|NS 0.061 . SPBC1709.14 36 PFYHEVR|QM 0.116 . SPBC1709.14 62 SILPLDK|LF 0.058 . SPBC1709.14 72 DASELEK|EG 0.061 . SPBC1709.14 90 VIQALLK|WF 0.062 . SPBC1709.14 93 ALLKWFK|RE 0.056 . SPBC1709.14 94 LLKWFKR|EF 0.191 . SPBC1709.14 107 NQPPCEK|CG 0.060 . SPBC1709.14 125 PPNEEEK|WN 0.075 . SPBC1709.14 130 EKWNGVR|NV 0.116 . SPBC1709.14 145 VCGHNQR|FP 0.084 . SPBC1709.14 148 HNQRFPR|YN 0.318 . SPBC1709.14 151 RFPRYNR|IR 0.106 . SPBC1709.14 153 PRYNRIR|AL 0.138 . SPBC1709.14 159 RALLDSR|KG 0.073 . SPBC1709.14 160 ALLDSRK|GR 0.077 . SPBC1709.14 162 LDSRKGR|CG 0.456 . SPBC1709.14 175 CFTFLCR|AL 0.090 . SPBC1709.14 180 CRALGSR|AR 0.080 . SPBC1709.14 182 ALGSRAR|WI 0.141 . SPBC1709.14 199 TEVYSNK|QQ 0.071 . SPBC1709.14 202 YSNKQQR|WV 0.175 . SPBC1709.14 225 YEQGWGK|KM 0.064 . SPBC1709.14 226 EQGWGKK|MS 0.095 . SPBC1709.14 239 FGIDSVR|DV 0.140 . SPBC1709.14 244 VRDVSHR|YI 0.145 . SPBC1709.14 247 VSHRYIR|HP 0.377 . SPBC1709.14 255 PENGLPR|DR 0.099 . SPBC1709.14 257 NGLPRDR|CP 0.087 . SPBC1709.14 275 EINIEFR|SR 0.090 . SPBC1709.14 277 NIEFRSR|LT 0.096 . SPBC1709.14 283 RLTDSER|KA 0.091 . SPBC1709.14 284 LTDSERK|AL 0.080 . SPBC1709.14 291 ALEEEDK|RE 0.066 . SPBC1709.14 292 LEEEDKR|EK 0.124 . SPBC1709.14 294 EEDKREK|DE 0.060 . SPBC1709.14 302 ELDGYMR|PV 0.150 . SPBC1709.14 317 NTDLPAR|QT 0.133 . SPBC1709.14 325 TGNVEWK|EK 0.073 . SPBC1709.14 327 NVEWKEK|RG 0.066 . SPBC1709.14 328 VEWKEKR|GE 0.162 . SPBC1709.14 333 KRGEAGK|-- 0.071 . ____________________________^_________________

  • Fasta :-

    >SPBC1709.14 TTCTCCCACAGTTTTTAATGCGGATAACCGCCATTTGTATTGTTACAAAAAACTGTATCG ATGCTAATTAGTTTAAAACGCTTGTAGTAATTTGCAATTGATAACAATTTGAAGTCTTTA TACTCATAATTAGACTACAGGAAAGCGTTGTCTTTTAGAATTTAGCGTATATTGTGATTC GTGAATACATTACCCTCATTTTTTGTAAATCAATCCAGTTTTACAAATACCTTCTTTAAT TTTTTCTTTTTTTTTCTTTTTTTTTGTTTACAATCGTTAGCTATTTTCTTGAAAATAGGA CATTTGCTGAAAATGGATTTTCATGCGATTTCTCAACGTTTCATTGATATGATGAGAAGC AAGAATTCCCAGAACGCTTCTCAGCCTCCAGAGACATATCCCTTTTATCATGAAGTACGT CAAATGTCACAACACCCGTGGATGTATGAAGACCCAGAGTTGCAGGATTATGCTCTTAGC ATTTTACCACTTGACAAACTATTTCAAGATGCTTCTGAATTAGAAAAAGAGGGAGATGGA TCTTGGGGTTACCAAGATTATGTGATTCAAGCCTTGTTAAAGTGGTTCAAGCGAGAATTC TTTGTTTGGGTTAATCAACCACCTTGCGAAAAATGTGGAGGTGAAACTCATATGACAGGC AACGGTCCCCCCAATGAGGAAGAAAAATGGAATGGAGTCCGCAACGTAGAGCTTTATCAA TGCAATGTATGCGGGCATAATCAGAGATTTCCCAGGTATAATCGCATTCGAGCATTGCTT GATTCAAGGAAGGGAAGATGTGGAGAGTGGGCCAACTGTTTCACTTTCCTATGCAGAGCA CTTGGATCTAGAGCTAGGTGGATTTGGAATGCTGAGGACCATGTGTGGACGGAAGTCTAT AGTAATAAACAGCAACGCTGGGTGCATGTCGATAGTGGTGAAGAATCATTCGATGAACCT TTGATATACGAACAAGGTTGGGGAAAGAAGATGTCATATTGTTTGGGTTTTGGGATCGAT AGTGTTCGCGATGTATCGCATAGATATATTCGTCACCCTGAGAATGGTCTTCCTCGTGAT CGATGCCCCGAATCTGTCCTACAACAGGCTTTGCATGAGATTAATATTGAGTTTCGGTCC CGACTAACTGATTCTGAACGTAAGGCTCTAGAGGAGGAAGACAAACGTGAAAAAGATGAA CTTGATGGTTATATGCGTCCTGTTTCCCAGGCCACGCCCACTAACACTGACCTGCCAGCA AGACAAACGGGGAATGTTGAATGGAAAGAGAAAAGAGGGGAAGCAGGAAAATGATTGTTT CATAAAGCTTTACGTTCCGTTTCTATTACCAAACATTTATTAGTTATGTTGTACATGAAT CCTTTCTAGTTACTAGCTTTTTTTTTATGTAATCCTAATTAAATTTTTTTTTCATACATT AGTTAAACGACAGCAAGTGCATCG
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  • Fasta :-

    MDFHAISQRFIDMMRSKNSQNASQPPETYPFYHEVRQMSQHPWMYEDPELQDYALSILPL DKLFQDASELEKEGDGSWGYQDYVIQALLKWFKREFFVWVNQPPCEKCGGETHMTGNGPP NEEEKWNGVRNVELYQCNVCGHNQRFPRYNRIRALLDSRKGRCGEWANCFTFLCRALGSR ARWIWNAEDHVWTEVYSNKQQRWVHVDSGEESFDEPLIYEQGWGKKMSYCLGFGIDSVRD VSHRYIRHPENGLPRDRCPESVLQQALHEINIEFRSRLTDSERKALEEEDKREKDELDGY MRPVSQATPTNTDLPARQTGNVEWKEKRGEAGK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC1709.14208 SVHVDSGEES0.993unspSPBC1709.14242 SVRDVSHRYI0.995unsp

SPBC1709.14      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India