SPBC18A7.01 | X-Pro dipeptidase (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC18A7.01OTHER0.9828660.0128620.004272
No Results

  • Fasta :-

    >SPBC18A7.01 MVSFESSFERGTDFLNRNFKKCLFACISIFIFALLALSFLSLLQPDTVQRLYQCAVPSMI YVPPMINEAISIQHEEFNNRRRRLSAALREDKLDALIMEPTVSMDYFANITTGSWGLSER PFLGIIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYD RLGPLKLMIDGTVRNFIAQGLQYAGFTTFGVSPRVASLREIKSPAEVDIMSRVNIATVAA IRSVQPCIKPGITEKELAEVINMLFVYGGLPVQESPIVLFGERAAMPHGGPSNRRLKKSE FVLMDVGTTLFGYHSDCTRTVLPHGQKMTERMEKLWNLVYDAQTAGIQMLSHLSNTSCAE VDLAARKVIKDAGYGEYFIHRLGHGLGLEEHEQTYLNPANKGTPVQKGNVFTVEPGIYIP DEIGIRIEDAVLASDVPILLTNFRAKSPYEP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/860 Sequence name : 860 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 4.124 CoefTot : 0.112 ChDiff : -8 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.547 2.718 0.639 0.894 MesoH : -0.208 0.637 -0.239 0.269 MuHd_075 : 11.717 4.109 3.470 0.952 MuHd_095 : 43.820 16.585 10.034 7.561 MuHd_100 : 41.671 18.235 8.567 8.495 MuHd_105 : 35.218 18.581 6.768 8.356 Hmax_075 : -6.737 -0.350 -3.536 1.377 Hmax_095 : 13.600 6.700 1.316 3.790 Hmax_100 : 11.000 7.500 -0.043 4.220 Hmax_105 : 12.338 8.225 0.081 4.253 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9375 0.0625 DFMC : 0.9588 0.0412
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 SPBC18A7.01 MVSFESSFERGTDFLNRNFKKCLFACISIFIFALLALSFLSLLQPDTVQRLYQCAVPSMIYVPPMINEAISIQHEEFNNR 80 RRRLSAALREDKLDALIMEPTVSMDYFANITTGSWGLSERPFLGIIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKN 160 IDAKYITWDEDENPYQVLYDRLGPLKLMIDGTVRNFIAQGLQYAGFTTFGVSPRVASLREIKSPAEVDIMSRVNIATVAA 240 IRSVQPCIKPGITEKELAEVINMLFVYGGLPVQESPIVLFGERAAMPHGGPSNRRLKKSEFVLMDVGTTLFGYHSDCTRT 320 VLPHGQKMTERMEKLWNLVYDAQTAGIQMLSHLSNTSCAEVDLAARKVIKDAGYGEYFIHRLGHGLGLEEHEQTYLNPAN 400 KGTPVQKGNVFTVEPGIYIPDEIGIRIEDAVLASDVPILLTNFRAKSPYEP 480 ................................................................................ 80 ..P............................................................................. 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPBC18A7.01 10 FESSFER|GT 0.124 . SPBC18A7.01 17 GTDFLNR|NF 0.102 . SPBC18A7.01 20 FLNRNFK|KC 0.106 . SPBC18A7.01 21 LNRNFKK|CL 0.162 . SPBC18A7.01 50 QPDTVQR|LY 0.094 . SPBC18A7.01 80 HEEFNNR|RR 0.065 . SPBC18A7.01 81 EEFNNRR|RR 0.077 . SPBC18A7.01 82 EFNNRRR|RL 0.192 . SPBC18A7.01 83 FNNRRRR|LS 0.516 *ProP* SPBC18A7.01 89 RLSAALR|ED 0.073 . SPBC18A7.01 92 AALREDK|LD 0.080 . SPBC18A7.01 120 SWGLSER|PF 0.096 . SPBC18A7.01 140 PGDVASR|IY 0.084 . SPBC18A7.01 147 IYFLVPK|FE 0.059 . SPBC18A7.01 152 PKFELPR|AK 0.092 . SPBC18A7.01 154 FELPRAK|EL 0.063 . SPBC18A7.01 159 AKELVGK|NI 0.081 . SPBC18A7.01 164 GKNIDAK|YI 0.092 . SPBC18A7.01 181 YQVLYDR|LG 0.068 . SPBC18A7.01 186 DRLGPLK|LM 0.061 . SPBC18A7.01 194 MIDGTVR|NF 0.091 . SPBC18A7.01 214 TFGVSPR|VA 0.116 . SPBC18A7.01 219 PRVASLR|EI 0.086 . SPBC18A7.01 222 ASLREIK|SP 0.155 . SPBC18A7.01 232 EVDIMSR|VN 0.070 . SPBC18A7.01 242 ATVAAIR|SV 0.145 . SPBC18A7.01 249 SVQPCIK|PG 0.062 . SPBC18A7.01 255 KPGITEK|EL 0.076 . SPBC18A7.01 283 IVLFGER|AA 0.090 . SPBC18A7.01 294 HGGPSNR|RL 0.121 . SPBC18A7.01 295 GGPSNRR|LK 0.108 . SPBC18A7.01 297 PSNRRLK|KS 0.190 . SPBC18A7.01 298 SNRRLKK|SE 0.478 . SPBC18A7.01 319 YHSDCTR|TV 0.122 . SPBC18A7.01 327 VLPHGQK|MT 0.069 . SPBC18A7.01 331 GQKMTER|ME 0.077 . SPBC18A7.01 334 MTERMEK|LW 0.126 . SPBC18A7.01 366 EVDLAAR|KV 0.084 . SPBC18A7.01 367 VDLAARK|VI 0.083 . SPBC18A7.01 370 AARKVIK|DA 0.142 . SPBC18A7.01 381 GEYFIHR|LG 0.082 . SPBC18A7.01 401 YLNPANK|GT 0.072 . SPBC18A7.01 407 KGTPVQK|GN 0.060 . SPBC18A7.01 426 PDEIGIR|IE 0.081 . SPBC18A7.01 444 ILLTNFR|AK 0.111 . SPBC18A7.01 446 LTNFRAK|SP 0.088 . ____________________________^_________________

  • Fasta :-

    >SPBC18A7.01 GTAATATCTGACATACTATATAGTTCAGCACCACCTCTCTTCAATCAGCAGAATTGCTCA AAAATGGTTTCTTTTGAATCAAGTTTTGAACGAGGTACCGATTTTTTGAATAGAAATTTT AAGAAATGTCTCTTCGCATGCATTTCCATCTTCATTTTTGCGCTTTTAGCATTATCATTC CTATCACTGTTACAACCAGATACAGTGCAAAGGCTTTACCAATGCGCTGTTCCCTCAATG ATTTATGTTCCACCGATGATTAATGAAGCAATTTCAATACAACATGAAGAATTCAACAAT CGTAGGCGGAGACTTTCGGCTGCACTTCGTGAAGATAAGTTGGATGCTCTAATTATGGAG CCTACAGTTTCAATGGATTATTTTGCAAATATCACTACTGGCTCCTGGGGTCTTTCTGAG CGACCTTTTTTGGGAATAATATTTTCAGACGATGAACCCTATCCAGGAGACGTGGCATCA AGAATATATTTTCTAGTACCTAAGTTTGAGCTACCACGTGCTAAAGAATTGGTTGGCAAA AACATTGATGCGAAATACATCACTTGGGATGAAGACGAAAACCCTTATCAAGTTTTATAT GACCGGTTAGGACCTTTGAAGTTAATGATAGATGGTACTGTGCGAAATTTCATTGCACAA GGTTTACAGTATGCTGGATTTACCACATTTGGGGTGTCCCCCCGTGTTGCGAGTTTACGG GAAATAAAAAGTCCAGCTGAGGTAGATATTATGTCAAGGGTCAATATTGCAACTGTGGCA GCTATACGATCTGTCCAACCGTGTATTAAACCTGGTATTACGGAGAAAGAGTTGGCGGAA GTGATTAACATGCTTTTTGTTTACGGTGGATTGCCTGTGCAAGAGTCACCGATAGTTTTG TTCGGTGAAAGAGCAGCAATGCCACATGGAGGTCCATCGAATCGTCGATTGAAAAAAAGC GAATTTGTCTTGATGGATGTTGGTACTACTTTGTTTGGCTATCATAGCGATTGCACCCGA ACTGTACTTCCCCATGGCCAAAAGATGACTGAGAGGATGGAGAAGCTTTGGAATTTGGTT TACGATGCCCAGACGGCCGGCATCCAGATGCTTTCCCATTTATCGAACACAAGTTGTGCA GAAGTTGACCTAGCAGCCAGAAAAGTAATTAAAGATGCTGGTTATGGCGAGTATTTTATA CACAGATTGGGACACGGGTTAGGATTAGAAGAGCATGAACAAACTTACCTTAATCCTGCC AATAAAGGTACGCCTGTACAAAAGGGAAATGTGTTTACTGTTGAGCCTGGAATTTACATA CCTGACGAAATTGGAATTCGTATTGAAGATGCTGTTTTAGCATCTGATGTTCCTATTCTA TTAACAAACTTTAGGGCAAAAAGTCCCTACGAGCCTTAATATTTATGTGATTTTTTGTGA TTGTAACCTGAATTGGATCAAATAATTTAATTCATACTATTAACATTAGTAGTAATTGAA ATAAAATCAACTCATCAACGAAAGAAATTGAACATAAAAAACTATTTTGATTTATCCGCC CTGATATCTTCCTCTAATAA
  • Download Fasta

  • Fasta :-

    MVSFESSFERGTDFLNRNFKKCLFACISIFIFALLALSFLSLLQPDTVQRLYQCAVPSMI YVPPMINEAISIQHEEFNNRRRRLSAALREDKLDALIMEPTVSMDYFANITTGSWGLSER PFLGIIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYD RLGPLKLMIDGTVRNFIAQGLQYAGFTTFGVSPRVASLREIKSPAEVDIMSRVNIATVAA IRSVQPCIKPGITEKELAEVINMLFVYGGLPVQESPIVLFGERAAMPHGGPSNRRLKKSE FVLMDVGTTLFGYHSDCTRTVLPHGQKMTERMEKLWNLVYDAQTAGIQMLSHLSNTSCAE VDLAARKVIKDAGYGEYFIHRLGHGLGLEEHEQTYLNPANKGTPVQKGNVFTVEPGIYIP DEIGIRIEDAVLASDVPILLTNFRAKSPYEP

  • title: active site
  • coordinates: H288,D305,D316,H384,E414,E428
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC18A7.01447 SFRAKSPYEP0.997unspSPBC18A7.01447 SFRAKSPYEP0.997unspSPBC18A7.01447 SFRAKSPYEP0.997unspSPBC18A7.01212 STFGVSPRVA0.991unspSPBC18A7.01217 SPRVASLREI0.996unsp

SPBC4F6.19c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India