SPBC32H8.02c | NEDD8 protease Nep2

_IDPredictionOTHERSPmTPCS_Position
SPBC32H8.02cOTHER0.9999380.0000090.000053
No Results

  • Fasta :-

    >SPBC32H8.02c MRSNSIFTKEIDSEAVKKSSNLRPPSTGSSNSNGSDTASPKKKKKGFFRSLFGSSSSGSK SCGSPFTRIWLEYFEVSLRKNDVDHFRPGYWILDTNIDFFYEIMLRQVLLKRPKEESQQI YLLRPAMVFFLAQAPNPLEIESALPPAMFDASFIFLPINDTNECGIESGSHWSLLVVSVE KGLGWYYDSMSNGNTNDCNLAIKNLGILLKKEFRVRHMKTPQQINDCDCGLHVCENTRIL MYRLLQKPYVPKVDMNLDHSVVDSVRLRKALMEVITSLLAAYGSKVPKPSETHTDPEKDK KIFSKICKTEELLELPTLSAVTSDSAQPHSLPASMPSSQPQSRSESLPLTHPNSEPNPKL DSQPNSSPVRRPSLIKVKTASTSVLPTSILQRPPSIVPRPETAAIQHTQQSIEIH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/768 Sequence name : 768 Sequence length : 415 VALUES OF COMPUTED PARAMETERS Coef20 : 4.166 CoefTot : 0.112 ChDiff : 7 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.324 1.318 0.089 0.600 MesoH : -0.132 0.428 -0.300 0.318 MuHd_075 : 27.168 26.702 9.456 7.752 MuHd_095 : 31.199 13.539 8.051 6.074 MuHd_100 : 20.415 7.804 4.642 3.970 MuHd_105 : 5.106 1.125 1.328 1.779 Hmax_075 : 4.200 9.800 -0.252 3.663 Hmax_095 : -1.800 5.600 -1.988 2.590 Hmax_100 : -0.600 2.900 -3.119 1.530 Hmax_105 : -7.700 -0.350 -4.648 0.691 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4298 0.5702 DFMC : 0.5117 0.4883
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 415 SPBC32H8.02c MRSNSIFTKEIDSEAVKKSSNLRPPSTGSSNSNGSDTASPKKKKKGFFRSLFGSSSSGSKSCGSPFTRIWLEYFEVSLRK 80 NDVDHFRPGYWILDTNIDFFYEIMLRQVLLKRPKEESQQIYLLRPAMVFFLAQAPNPLEIESALPPAMFDASFIFLPIND 160 TNECGIESGSHWSLLVVSVEKGLGWYYDSMSNGNTNDCNLAIKNLGILLKKEFRVRHMKTPQQINDCDCGLHVCENTRIL 240 MYRLLQKPYVPKVDMNLDHSVVDSVRLRKALMEVITSLLAAYGSKVPKPSETHTDPEKDKKIFSKICKTEELLELPTLSA 320 VTSDSAQPHSLPASMPSSQPQSRSESLPLTHPNSEPNPKLDSQPNSSPVRRPSLIKVKTASTSVLPTSILQRPPSIVPRP 400 ETAAIQHTQQSIEIH 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC32H8.02c 2 -----MR|SN 0.149 . SPBC32H8.02c 9 SNSIFTK|EI 0.087 . SPBC32H8.02c 17 IDSEAVK|KS 0.066 . SPBC32H8.02c 18 DSEAVKK|SS 0.137 . SPBC32H8.02c 23 KKSSNLR|PP 0.108 . SPBC32H8.02c 41 SDTASPK|KK 0.070 . SPBC32H8.02c 42 DTASPKK|KK 0.088 . SPBC32H8.02c 43 TASPKKK|KK 0.192 . SPBC32H8.02c 44 ASPKKKK|KG 0.078 . SPBC32H8.02c 45 SPKKKKK|GF 0.218 . SPBC32H8.02c 49 KKKGFFR|SL 0.217 . SPBC32H8.02c 60 SSSSGSK|SC 0.094 . SPBC32H8.02c 68 CGSPFTR|IW 0.104 . SPBC32H8.02c 79 YFEVSLR|KN 0.069 . SPBC32H8.02c 80 FEVSLRK|ND 0.070 . SPBC32H8.02c 87 NDVDHFR|PG 0.113 . SPBC32H8.02c 106 FYEIMLR|QV 0.081 . SPBC32H8.02c 111 LRQVLLK|RP 0.063 . SPBC32H8.02c 112 RQVLLKR|PK 0.183 . SPBC32H8.02c 114 VLLKRPK|EE 0.065 . SPBC32H8.02c 124 QQIYLLR|PA 0.105 . SPBC32H8.02c 181 LVVSVEK|GL 0.076 . SPBC32H8.02c 203 DCNLAIK|NL 0.071 . SPBC32H8.02c 210 NLGILLK|KE 0.070 . SPBC32H8.02c 211 LGILLKK|EF 0.075 . SPBC32H8.02c 214 LLKKEFR|VR 0.086 . SPBC32H8.02c 216 KKEFRVR|HM 0.084 . SPBC32H8.02c 219 FRVRHMK|TP 0.156 . SPBC32H8.02c 238 HVCENTR|IL 0.083 . SPBC32H8.02c 243 TRILMYR|LL 0.101 . SPBC32H8.02c 247 MYRLLQK|PY 0.066 . SPBC32H8.02c 252 QKPYVPK|VD 0.064 . SPBC32H8.02c 266 SVVDSVR|LR 0.073 . SPBC32H8.02c 268 VDSVRLR|KA 0.106 . SPBC32H8.02c 269 DSVRLRK|AL 0.284 . SPBC32H8.02c 285 LAAYGSK|VP 0.064 . SPBC32H8.02c 288 YGSKVPK|PS 0.094 . SPBC32H8.02c 298 THTDPEK|DK 0.061 . SPBC32H8.02c 300 TDPEKDK|KI 0.077 . SPBC32H8.02c 301 DPEKDKK|IF 0.146 . SPBC32H8.02c 305 DKKIFSK|IC 0.075 . SPBC32H8.02c 308 IFSKICK|TE 0.065 . SPBC32H8.02c 343 SSQPQSR|SE 0.163 . SPBC32H8.02c 359 NSEPNPK|LD 0.067 . SPBC32H8.02c 370 PNSSPVR|RP 0.082 . SPBC32H8.02c 371 NSSPVRR|PS 0.215 . SPBC32H8.02c 376 RRPSLIK|VK 0.063 . SPBC32H8.02c 378 PSLIKVK|TA 0.071 . SPBC32H8.02c 392 PTSILQR|PP 0.104 . SPBC32H8.02c 399 PPSIVPR|PE 0.148 . ____________________________^_________________

  • Fasta :-

    >SPBC32H8.02c TCCACCCATCTCCATCTTCACCTCCACATTCTGGGTCTGTCTTTTTGCCCTTTACCCCAA CTTTTTGCCAACCACAAAAGTACGTGTTGGACGGTCATTGCCGGCTCCTTTTCTGAACAC TCCTTTCATCATTTTTTGCTTTTTCATTGCTCAGAAAACTTCTTTCCTCTACACAATACT CACCACTTAATTTCCTCTCTTCTCACTACTACACACTTTTTTTTTAACTCTCTTCTCTAC TCTCTGTAGGTGTGTGTGTGTGTGAGTGTGCGAGTGTATGCGTACGTGCGTGTACAAGTG TGAGTGTGTTCTGCTGACTGTTCGTTCGTCTTTCTCTCTCTATACAATTTCTACTACATT CATTCTCACCATTTTTATTCTAATCCTTGTTTTTCTTTTTTTCTTTCTCCACATTGTTTG GTGAGGTGGTTGAATTGTTTTTTTTTATATTATAGAAGTTTCTCTATTGGTTTTTTCCTT CTCATATTTTTGGCATTTTTCCTCCTTTTTCTTTTCTTCTTTCTCTTTCCCTGCATCCTT TTGATTTGCTTTTCTTTTCCCGTTTTACTTTTTACTTTGCACGTTCTCCTTTTTTAAAGG CTTTTTTTCTCCTCCTTCTCTCGACGTCGTCTTCTTTTACTTTTATTCGTAACCAACTTA AGACTCGTCTCTACCTCAAATTATCTCTCAATTCTATTCCATCTGGATTCTCTCGGATTT CTTCCTTGCGCTTTTTTTATCTCCTTTTTCTTCCTTCTTAGCGCTCCAACTCTCCGTTAA TCGTTTTTCCTTTTTTTTCCCGTTGCAACCCTTGGTTTCATCTCATCATCTTTTATCCCT CCAAACTCATTTATCCTCGATCCAAATCCAATCCAATCCAATTCAATTCAAGCTTCCTAA TTGCTTGCTTGCCCAATTGCATTCGAAAACTTCCCAGTTAACAACAAGTTTTTCCATTTG CTATTTCTTTTGTTTTTGCTTTGCCTTTTTTTTTTACCTTTCTCTTTTAGTTTCTAATTT TCTTTTTCCTTTTATTTGTTCATACTGTCTTTTCCTAACTCTGTGAAAAAAAAAGAATTC GATATTTATTTATCCAATTCTTTCTTCTTTTCATTCAATTTTTTACTCTCCTTTTATTTC CTTTCTCATTTGCAATTCTCGTTCTTTCCCATTGTTCACTTTAGAAATAAAAAAGTGCTT ATTTTCTTATTACCTGCCTGGTAAAAAACGCGTTTCTAAAAACTTGTATTCGTCTTTTTC TCTTTCTCCCACTGTCCTATATTCCACTTTTAAAAAATGCGCTCCAATTCCATTTTCACA AAGGAAATCGACAGCGAGGCTGTGAAAAAGTCTAGCAATTTACGTCCTCCCTCCACCGGC TCTTCCAATTCTAATGGCTCTGATACCGCTTCTCCCAAAAAGAAGAAAAAGGGCTTTTTC CGTTCCTTGTTTGGCAGCAGCAGCAGCGGATCAAAGTCTTGCGGTTCCCCGTTTACGCGC ATCTGGCTTGAATATTTCGAGGTTTCCCTTCGCAAAAACGACGTCGACCACTTTCGTCCT GGGTATTGGATCCTTGATACAAACATCGATTTCTTTTACGAAATTATGTTGCGTCAAGTC TTGCTCAAACGTCCCAAGGAGGAGAGTCAACAAATATACTTGCTTCGTCCTGCTATGGTC TTCTTTTTGGCCCAGGCTCCTAATCCTTTGGAAATCGAGTCTGCCTTACCTCCTGCCATG TTTGATGCATCGTTTATCTTTCTTCCTATCAACGATACCAATGAGTGTGGTATCGAGAGC GGCTCGCATTGGAGTTTGTTAGTCGTCTCCGTTGAAAAAGGTTTGGGCTGGTACTATGAC TCCATGTCCAATGGTAATACCAATGACTGCAACCTTGCCATCAAAAACCTTGGCATTCTC CTTAAAAAGGAATTCCGTGTCCGACACATGAAGACTCCACAACAAATTAATGATTGTGAT TGCGGCCTTCATGTTTGCGAGAATACTCGTATCCTCATGTATCGTCTATTGCAAAAGCCT TATGTACCCAAAGTGGACATGAACTTGGACCATTCTGTTGTCGATAGTGTGCGTCTTCGC AAGGCACTAATGGAGGTCATTACTTCTTTACTTGCTGCTTATGGCTCCAAGGTACCCAAG CCTTCAGAAACGCATACCGATCCTGAAAAAGATAAAAAGATCTTTTCTAAAATATGCAAG ACGGAAGAGTTGTTAGAGCTACCTACGCTAAGCGCTGTTACTTCTGATTCGGCCCAACCG CATTCTTTGCCAGCTTCTATGCCCAGTTCGCAACCTCAATCAAGGTCGGAATCTTTGCCG CTCACACATCCCAATTCGGAACCAAATCCAAAGCTCGATTCACAGCCCAACTCCTCACCA GTTCGTAGGCCATCATTAATAAAGGTAAAGACCGCTAGTACTTCTGTTCTTCCAACCTCG ATACTTCAGAGACCACCCTCAATCGTACCGAGACCGGAAACCGCAGCTATACAACATACA CAACAATCCATTGAGATTCATTAATTTCCTCTGTCTCCCAAAATGCAACTTGCTTTGAAG TGAAGTTTGGATGTCTGATTTATTTTTTGCTTCATCATCGAATTGCATCGCATTGCTTTT TTCATCCATTTTTTGCCGCTATTTCCGTGTTTCAAGCATACAAGTTTTATCGGATTGTTC AGATGGTTATTTTTTTGAGTCAAGTTTTGTCATTGTAAATCTTTAGATGTTCATTTGCAT CCTCATATAGTCGTGAGAGATGAGGTATGAACGGATGTTTGTGTGTTATTTATGGAGGCT CGTCTTTTATTATTATTATTATATGTGTTTGGTTCTCGGTTCCTTATTATTATTATGTTG CTTGCTGGTTATTTTCTTGCACAATGTTGCTTATTTTTTAACTTGCTATTCCTTTTAGAT AAAGGTATCTGGGTATAAGATTCCACTTATGCTGTTGCTGTACATTGCTGGTTTATCCGG TCACTCGTTTTTCCTTTTTTTTTTTCATTTTTCCATTGTTGATAAGAATTTGTCCCTTTT CTTTATCATTTCTAAATATTTATTTATCTTTGTATTGTCATTACTTATGCGTTTCATTTC TAAATCACTGATTTTTGCAATGTTTTCCATCTTTAGGTTTCCACCTTTTACTTGCTACAA TTTTTATGAACAAACAAGTTGATCAATAGAAAATTTTGGAATTGCTTCCAGTGTTTTATT TTACCTTCCCTTTACAATAGGCTGAATAGACTTTACGAGTTGTATTCATTGTCCGAGGAA GGTTTTCAATAAGAAGTTTTGTTAACATGCCTTTTAATTGAATATGTATATGTGGGTGTA CGTTGCACTAAAGCCTTTATTTATTTATTTATTTTTTTTG
  • Download Fasta

  • Fasta :-

    MRSNSIFTKEIDSEAVKKSSNLRPPSTGSSNSNGSDTASPKKKKKGFFRSLFGSSSSGSK SCGSPFTRIWLEYFEVSLRKNDVDHFRPGYWILDTNIDFFYEIMLRQVLLKRPKEESQQI YLLRPAMVFFLAQAPNPLEIESALPPAMFDASFIFLPINDTNECGIESGSHWSLLVVSVE KGLGWYYDSMSNGNTNDCNLAIKNLGILLKKEFRVRHMKTPQQINDCDCGLHVCENTRIL MYRLLQKPYVPKVDMNLDHSVVDSVRLRKALMEVITSLLAAYGSKVPKPSETHTDPEKDK KIFSKICKTEELLELPTLSAVTSDSAQPHSLPASMPSSQPQSRSESLPLTHPNSEPNPKL DSQPNSSPVRRPSLIKVKTASTSVLPTSILQRPPSIVPRPETAAIQHTQQSIEIH

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC32H8.02c342 SSQPQSRSES0.993unspSPBC32H8.02c342 SSQPQSRSES0.993unspSPBC32H8.02c342 SSQPQSRSES0.993unspSPBC32H8.02c373 SVRRPSLIKV0.993unspSPBC32H8.02c39 SSDTASPKKK0.995unspSPBC32H8.02c260 SNLDHSVVDS0.997unsp


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India