SPBC3E7.10 | methionine aminopeptidase Fma1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC3E7.10OTHER0.9999180.0000740.000009
No Results

  • Fasta :-

    >SPBC3E7.10 MATEIAKHICCGIDCNNEADRLQCPKCLNDGVKSYFCGQECFRNSWNIHKHLHRPPNVEK REDGTYNPFPKFHFAGSLKPVYPLSPIRKVPPHIKRPDYAKTGVSRSEQIEGRSFKLKRL TPKEQEGMRKVCRLGREVLDAAAAAVRPGTTTDELDSIVHNACIERDCFPSTLNYYAFPK SVCTSVNEIICHGIPDQRPLEDGDIVNIDVSLYHNGFHGDLNETYYVGDKAKANPDLVCL VENTRIALDKAIAAVKPGVLFQEFGNIIEKHTNSITEKQISVVRTYCGHGINQLFHCSPS IPHYSHNKAPGIARPGMTFTIEPMLTLGPARDITWPDDWTSSTASGRCSAQFEHTLLVTE TGCEVLTARLPNSPGGPLK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/389 Sequence name : 389 Sequence length : 379 VALUES OF COMPUTED PARAMETERS Coef20 : 3.415 CoefTot : 0.141 ChDiff : 1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.506 1.071 -0.058 0.491 MesoH : -0.498 0.111 -0.372 0.159 MuHd_075 : 24.111 19.372 11.302 3.545 MuHd_095 : 24.103 16.799 4.120 6.327 MuHd_100 : 32.851 19.641 7.150 7.044 MuHd_105 : 34.652 19.991 9.005 6.861 Hmax_075 : 16.450 18.317 7.924 4.118 Hmax_095 : 11.463 15.750 2.976 4.891 Hmax_100 : 10.500 13.300 2.211 5.160 Hmax_105 : 11.200 13.200 2.552 5.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8207 0.1793 DFMC : 0.8978 0.1022
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 379 SPBC3E7.10 MATEIAKHICCGIDCNNEADRLQCPKCLNDGVKSYFCGQECFRNSWNIHKHLHRPPNVEKREDGTYNPFPKFHFAGSLKP 80 VYPLSPIRKVPPHIKRPDYAKTGVSRSEQIEGRSFKLKRLTPKEQEGMRKVCRLGREVLDAAAAAVRPGTTTDELDSIVH 160 NACIERDCFPSTLNYYAFPKSVCTSVNEIICHGIPDQRPLEDGDIVNIDVSLYHNGFHGDLNETYYVGDKAKANPDLVCL 240 VENTRIALDKAIAAVKPGVLFQEFGNIIEKHTNSITEKQISVVRTYCGHGINQLFHCSPSIPHYSHNKAPGIARPGMTFT 320 IEPMLTLGPARDITWPDDWTSSTASGRCSAQFEHTLLVTETGCEVLTARLPNSPGGPLK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC3E7.10 7 MATEIAK|HI 0.073 . SPBC3E7.10 21 CNNEADR|LQ 0.081 . SPBC3E7.10 26 DRLQCPK|CL 0.077 . SPBC3E7.10 33 CLNDGVK|SY 0.110 . SPBC3E7.10 43 CGQECFR|NS 0.082 . SPBC3E7.10 50 NSWNIHK|HL 0.067 . SPBC3E7.10 54 IHKHLHR|PP 0.081 . SPBC3E7.10 60 RPPNVEK|RE 0.061 . SPBC3E7.10 61 PPNVEKR|ED 0.344 . SPBC3E7.10 71 TYNPFPK|FH 0.081 . SPBC3E7.10 79 HFAGSLK|PV 0.075 . SPBC3E7.10 88 YPLSPIR|KV 0.101 . SPBC3E7.10 89 PLSPIRK|VP 0.074 . SPBC3E7.10 95 KVPPHIK|RP 0.062 . SPBC3E7.10 96 VPPHIKR|PD 0.186 . SPBC3E7.10 101 KRPDYAK|TG 0.060 . SPBC3E7.10 106 AKTGVSR|SE 0.129 . SPBC3E7.10 113 SEQIEGR|SF 0.135 . SPBC3E7.10 116 IEGRSFK|LK 0.113 . SPBC3E7.10 118 GRSFKLK|RL 0.117 . SPBC3E7.10 119 RSFKLKR|LT 0.276 . SPBC3E7.10 123 LKRLTPK|EQ 0.076 . SPBC3E7.10 129 KEQEGMR|KV 0.115 . SPBC3E7.10 130 EQEGMRK|VC 0.077 . SPBC3E7.10 133 GMRKVCR|LG 0.109 . SPBC3E7.10 136 KVCRLGR|EV 0.335 . SPBC3E7.10 147 AAAAAVR|PG 0.075 . SPBC3E7.10 166 HNACIER|DC 0.124 . SPBC3E7.10 180 NYYAFPK|SV 0.134 . SPBC3E7.10 198 HGIPDQR|PL 0.098 . SPBC3E7.10 230 TYYVGDK|AK 0.054 . SPBC3E7.10 232 YVGDKAK|AN 0.070 . SPBC3E7.10 245 CLVENTR|IA 0.075 . SPBC3E7.10 250 TRIALDK|AI 0.103 . SPBC3E7.10 256 KAIAAVK|PG 0.054 . SPBC3E7.10 270 FGNIIEK|HT 0.065 . SPBC3E7.10 278 TNSITEK|QI 0.107 . SPBC3E7.10 284 KQISVVR|TY 0.085 . SPBC3E7.10 308 PHYSHNK|AP 0.084 . SPBC3E7.10 314 KAPGIAR|PG 0.080 . SPBC3E7.10 331 LTLGPAR|DI 0.113 . SPBC3E7.10 347 SSTASGR|CS 0.132 . SPBC3E7.10 369 CEVLTAR|LP 0.069 . SPBC3E7.10 379 SPGGPLK|-- 0.075 . ____________________________^_________________

  • Fasta :-

    >SPBC3E7.10 GAATTATTTATTTAAAAACTGAAAAGCATATATTAAAGTTATTTTTTTAGTTTTGCAAAA ATCATAACTTTAAAGAGTGGCATTGGGTTATATAGGTTCCAACGACATTAATGTACTTCA CGGCTACGAAGCACTAGTGTGACTAGAAATTCTCGAGTCTAGAAACTAAGGCGAGTGATA CCCTTAAGACAAAGTATTTATATGGCTACTGAAATTGCAAAACATATTTGTTGCGGTATA GATTGTAATAATGAAGCTGACAGACTGCAATGTCCCAAATGTCTAAATGACGGAGTTAAA TCTTACTTTTGTGGACAGGAATGCTTCAGGAACAGCTGGAATATTCACAAACATCTTCAT CGTCCACCGAATGTAGAAAAGAGAGAGGATGGAACTTACAATCCTTTCCCAAAATTTCAT TTCGCAGGTTCATTGAAACCAGTTTATCCGCTTTCGCCTATACGCAAGGTTCCTCCACAT ATAAAAAGACCTGACTATGCGAAGACAGGAGTCTCTCGTAGCGAGCAAATTGAAGGTCGA AGCTTCAAACTGAAGAGATTGACACCCAAGGAGCAGGAAGGTATGCGTAAAGTATGTAGA CTTGGTAGAGAGGTACTTGATGCTGCCGCTGCTGCCGTCCGTCCTGGAACAACTACCGAT GAACTTGATAGTATTGTTCATAATGCATGCATTGAACGTGATTGTTTTCCAAGCACCCTT AACTATTACGCGTTCCCAAAAAGTGTTTGTACTTCTGTGAACGAAATCATCTGTCACGGA ATTCCAGATCAAAGGCCACTTGAGGATGGTGATATTGTAAACATTGATGTTTCCCTTTAC CATAACGGTTTTCATGGTGACCTAAATGAGACTTACTATGTTGGAGATAAAGCAAAAGCA AATCCTGACCTCGTTTGCCTTGTAGAAAATACGAGAATTGCTTTGGATAAAGCAATTGCT GCGGTAAAACCGGGAGTATTGTTTCAGGAATTCGGAAATATTATTGAAAAGCATACAAAT AGCATTACTGAGAAGCAGATTTCTGTCGTCCGCACATATTGTGGACATGGAATCAACCAG TTATTTCACTGTTCTCCTAGTATTCCTCATTATTCCCACAACAAGGCACCTGGAATTGCT CGCCCAGGAATGACTTTTACAATCGAACCTATGCTTACTCTAGGTCCCGCCCGAGACATT ACCTGGCCGGATGATTGGACTAGTTCAACTGCATCTGGACGCTGTTCTGCTCAATTCGAA CATACACTGTTAGTTACAGAGACTGGTTGTGAAGTTTTAACAGCCAGACTCCCCAATTCA CCTGGAGGGCCCTTAAAATAAATTTTGATATACCCAACATGAATTAAAATAAAAGCAGAA AATTTTTCTTTGTATATGAAATTTATAAGTAAAAGGCTGAAAGAATTATATATGAGATTT CCTTCCTTTAA
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  • Fasta :-

    MATEIAKHICCGIDCNNEADRLQCPKCLNDGVKSYFCGQECFRNSWNIHKHLHRPPNVEK REDGTYNPFPKFHFAGSLKPVYPLSPIRKVPPHIKRPDYAKTGVSRSEQIEGRSFKLKRL TPKEQEGMRKVCRLGREVLDAAAAAVRPGTTTDELDSIVHNACIERDCFPSTLNYYAFPK SVCTSVNEIICHGIPDQRPLEDGDIVNIDVSLYHNGFHGDLNETYYVGDKAKANPDLVCL VENTRIALDKAIAAVKPGVLFQEFGNIIEKHTNSITEKQISVVRTYCGHGINQLFHCSPS IPHYSHNKAPGIARPGMTFTIEPMLTLGPARDITWPDDWTSSTASGRCSAQFEHTLLVTE TGCEVLTARLPNSPGGPLK

  • title: active site
  • coordinates: H192,D209,D220,H289,E322,E353
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC3E7.10281 SEKQISVVRT0.992unspSPBC3E7.10281 SEKQISVVRT0.992unspSPBC3E7.10281 SEKQISVVRT0.992unspSPBC3E7.10345 SSSTASGRCS0.993unspSPBC3E7.10105 SKTGVSRSEQ0.992unspSPBC3E7.10121 TLKRLTPKEQ0.991unsp

SPBC3E7.10      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India