SPBC409.06 | ubiquitin C-terminal hydrolase Uch2

_IDPredictionOTHERSPmTPCS_Position
SPBC409.06OTHER0.9999050.0000900.000004
No Results

  • Fasta :-

    >SPBC409.06 MSWTTIESDAGVFTDLIENLGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKP DGTMDYDSMDNIFFAKQVINNACATQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPPELK GEALGNSEHIRCCHNSFARSDPFISEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAAP INHGSCTKEEFAEKAVSVIQARIANYDPAEIRFNLMVICKDKKASLLTREDLTDEEKAAS IAVEDEKRLRWKRENQLRRHNFVGLFVELSKLLVKDRIDKNTWNSTLETAKAKYASQKRP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/917 Sequence name : 917 Sequence length : 300 VALUES OF COMPUTED PARAMETERS Coef20 : 3.901 CoefTot : 0.112 ChDiff : -16 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.606 1.206 -0.017 0.401 MesoH : -1.038 0.095 -0.531 0.155 MuHd_075 : 14.008 14.891 4.400 4.398 MuHd_095 : 21.866 17.981 6.421 3.929 MuHd_100 : 19.993 18.162 6.036 4.744 MuHd_105 : 17.341 16.397 4.702 5.106 Hmax_075 : 7.350 12.425 0.893 4.560 Hmax_095 : 7.612 10.938 0.545 4.034 Hmax_100 : 15.200 13.100 1.559 5.200 Hmax_105 : 18.900 19.250 2.781 7.618 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9544 0.0456 DFMC : 0.9676 0.0324
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 300 SPBC409.06 MSWTTIESDAGVFTDLIENLGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKPDGTMDYDSMDNIFFAKQVIN 80 NACATQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPPELKGEALGNSEHIRCCHNSFARSDPFISEEVRAATDEDEVYHF 160 IAYTNINNVFYELDGLQAAPINHGSCTKEEFAEKAVSVIQARIANYDPAEIRFNLMVICKDKKASLLTREDLTDEEKAAS 240 IAVEDEKRLRWKRENQLRRHNFVGLFVELSKLLVKDRIDKNTWNSTLETAKAKYASQKRP 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC409.06 23 IENLGVK|DV 0.093 . SPBC409.06 39 LDVDSLR|QF 0.089 . SPBC409.06 52 GIIFLFK|WN 0.072 . SPBC409.06 56 LFKWNSK|VD 0.058 . SPBC409.06 59 WNSKVDK|PD 0.093 . SPBC409.06 76 DNIFFAK|QV 0.083 . SPBC409.06 109 TTLSEFK|DF 0.076 . SPBC409.06 113 EFKDFSK|TL 0.067 . SPBC409.06 120 TLPPELK|GE 0.061 . SPBC409.06 131 GNSEHIR|CC 0.149 . SPBC409.06 139 CHNSFAR|SD 0.119 . SPBC409.06 149 FISEEVR|AA 0.124 . SPBC409.06 188 NHGSCTK|EE 0.062 . SPBC409.06 194 KEEFAEK|AV 0.090 . SPBC409.06 202 VSVIQAR|IA 0.098 . SPBC409.06 212 YDPAEIR|FN 0.079 . SPBC409.06 220 NLMVICK|DK 0.081 . SPBC409.06 222 MVICKDK|KA 0.068 . SPBC409.06 223 VICKDKK|AS 0.074 . SPBC409.06 229 KASLLTR|ED 0.092 . SPBC409.06 237 DLTDEEK|AA 0.070 . SPBC409.06 247 IAVEDEK|RL 0.063 . SPBC409.06 248 AVEDEKR|LR 0.138 . SPBC409.06 250 EDEKRLR|WK 0.079 . SPBC409.06 252 EKRLRWK|RE 0.068 . SPBC409.06 253 KRLRWKR|EN 0.474 . SPBC409.06 258 KRENQLR|RH 0.092 . SPBC409.06 259 RENQLRR|HN 0.229 . SPBC409.06 271 LFVELSK|LL 0.056 . SPBC409.06 275 LSKLLVK|DR 0.068 . SPBC409.06 277 KLLVKDR|ID 0.081 . SPBC409.06 280 VKDRIDK|NT 0.100 . SPBC409.06 291 STLETAK|AK 0.068 . SPBC409.06 293 LETAKAK|YA 0.113 . SPBC409.06 298 AKYASQK|RP 0.068 . SPBC409.06 299 KYASQKR|P- 0.186 . ____________________________^_________________

  • Fasta :-

    >SPBC409.06 GCGAATTTTAAAGTAATACCATCATTTGATCTCTCATAAAAGTCAGCTTGCATAAGTGCT GTCAAATTCCATTCTTTCGTTCTTCTGTAACACACAAGATGAGTTGGACTACAATAGAAT CAGATGCTGGTGTATTTACGGATTTAATAGAAAATCTGGGTGTTAAAGATGTCGAAGTAG ATGAACTATACAGTTTAGACGTTGATTCACTTCGACAGTTTCCAGATATTTATGGCATCA TATTTTTGTTTAAATGGAACAGTAAGGTTGACAAGCCTGATGGAACGATGGACTATGATA GTATGGACAATATATTTTTTGCTAAGCAAGTAATCAACAATGCCTGTGCTACGCAAGCTC TCTTATCGGTGCTGCTGAACCACTCAGACGAAATTGATTTGGGAACGACACTAAGCGAAT TCAAAGATTTTTCAAAAACTTTACCTCCTGAATTAAAGGGCGAAGCATTGGGAAATTCTG AGCATATTCGTTGTTGCCATAATTCATTCGCACGGTCTGATCCTTTCATTAGTGAAGAGG TTAGGGCTGCAACTGACGAAGATGAAGTGTATCATTTTATTGCATACACTAATATTAACA ACGTCTTTTATGAGTTAGATGGCCTACAAGCTGCTCCGATTAATCACGGATCTTGTACGA AGGAAGAGTTTGCTGAGAAAGCAGTCTCTGTAATCCAGGCTCGTATCGCTAATTATGACC CTGCTGAAATTCGGTTCAATTTAATGGTTATCTGCAAAGATAAAAAGGCATCTCTCCTTA CCAGGGAAGACTTGACAGACGAGGAGAAAGCTGCTTCCATTGCTGTTGAAGACGAAAAAC GTTTACGTTGGAAGCGTGAAAATCAGCTTCGTCGTCACAATTTCGTCGGTCTCTTCGTAG AACTTTCCAAACTTCTGGTAAAAGATCGCATTGACAAGAATACTTGGAACTCTACCCTTG AAACTGCAAAAGCGAAATACGCATCTCAAAAGCGACCGTAATATATTACGGCGTTCTTTC TCAAAAAATATTCCACTATGAAGGAATTTTCATTTCCAGGATAAAAATCTGTTATGACTC TAGATTACCTTGTTGGACTTATGTTGGGAGAATTTGTTTCTTTGATATATAAAAGTCTCG TACTTTTTAAATAAATGAATACCTCAAATCTCTTTGAGTAATATATTAATAGTTTAAGTA ATTATTATTAGGTCGATATAATATCTATTAACACTTGCATTTACGATGGA
  • Download Fasta

  • Fasta :-

    MSWTTIESDAGVFTDLIENLGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKP DGTMDYDSMDNIFFAKQVINNACATQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPPELK GEALGNSEHIRCCHNSFARSDPFISEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAAP INHGSCTKEEFAEKAVSVIQARIANYDPAEIRFNLMVICKDKKASLLTREDLTDEEKAAS IAVEDEKRLRWKRENQLRRHNFVGLFVELSKLLVKDRIDKNTWNSTLETAKAKYASQKRP

  • title: catalytic site
  • coordinates: Q77,C83,H159,D174
No Results
No Results
IDSitePeptideScoreMethod
SPBC409.06296 SAKYASQKRP0.994unsp

SPBC409.06      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India