SPBC577.10 | 20S proteasome complex subunit beta 7, Pre4 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC577.10OTHER0.9998730.0000810.000047
No Results

  • Fasta :-

    >SPBC577.10 MSFLELTEVWGKPQKDIFFPSGSEVEESTDAPIQRTVQPIVTGSSVLALKFADGVMIAAD NLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKLEIKEGNYGDGYALQP SYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLRGTTYSAPAIATGFAM HLALPMLRKATDDDRWKTLSKESARATIDECMRVLFYRDARSLNKFSVATITPEGIEFQT DQSVSSKWAFAEKQYGYGTQTV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/606 Sequence name : 606 Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 3.386 CoefTot : 0.234 ChDiff : -7 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.694 1.412 0.109 0.621 MesoH : -0.746 0.238 -0.377 0.184 MuHd_075 : 9.928 8.513 3.318 2.743 MuHd_095 : 35.015 13.393 7.843 5.772 MuHd_100 : 37.723 15.317 9.186 6.511 MuHd_105 : 35.773 15.061 9.091 6.400 Hmax_075 : 7.500 13.000 0.276 5.380 Hmax_095 : 11.288 7.438 -0.388 4.200 Hmax_100 : 14.500 12.000 1.297 5.550 Hmax_105 : 14.583 9.300 0.714 5.343 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9306 0.0694 DFMC : 0.8796 0.1204
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 SPBC577.10 MSFLELTEVWGKPQKDIFFPSGSEVEESTDAPIQRTVQPIVTGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKV 80 GDNTIVGAGGDISDYQQIQRLLEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVA 160 FADLRGTTYSAPAIATGFAMHLALPMLRKATDDDRWKTLSKESARATIDECMRVLFYRDARSLNKFSVATITPEGIEFQT 240 DQSVSSKWAFAEKQYGYGTQTV 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC577.10 12 LTEVWGK|PQ 0.062 . SPBC577.10 15 VWGKPQK|DI 0.067 . SPBC577.10 35 TDAPIQR|TV 0.191 . SPBC577.10 50 SSVLALK|FA 0.082 . SPBC577.10 70 SYGSLAR|FY 0.113 . SPBC577.10 76 RFYDVER|LT 0.088 . SPBC577.10 79 DVERLTK|VG 0.087 . SPBC577.10 100 DYQQIQR|LL 0.089 . SPBC577.10 104 IQRLLEK|LE 0.064 . SPBC577.10 108 LEKLEIK|EG 0.059 . SPBC577.10 129 IHEYLSK|VL 0.062 . SPBC577.10 134 SKVLYAR|RN 0.074 . SPBC577.10 135 KVLYARR|NK 0.084 . SPBC577.10 137 LYARRNK|LD 0.083 . SPBC577.10 155 GVDGENK|EP 0.057 . SPBC577.10 165 VAFADLR|GT 0.094 . SPBC577.10 188 LALPMLR|KA 0.084 . SPBC577.10 189 ALPMLRK|AT 0.095 . SPBC577.10 195 KATDDDR|WK 0.075 . SPBC577.10 197 TDDDRWK|TL 0.064 . SPBC577.10 201 RWKTLSK|ES 0.062 . SPBC577.10 205 LSKESAR|AT 0.129 . SPBC577.10 213 TIDECMR|VL 0.070 . SPBC577.10 218 MRVLFYR|DA 0.161 . SPBC577.10 221 LFYRDAR|SL 0.361 . SPBC577.10 225 DARSLNK|FS 0.062 . SPBC577.10 247 DQSVSSK|WA 0.096 . SPBC577.10 253 KWAFAEK|QY 0.086 . ____________________________^_________________

  • Fasta :-

    >SPBC577.10 CGAAAACTTAGTAAGAACCACACAGTTTTAATTTGCAAAAAATGAGTTTTTTAGAATTAA CAGAGGTTTGGGGAAAGCCTCAAAAAGACATTTTTTTTCCTAGTGGCTCGGAAGTTGAAG AATCAACCGATGCACCAATTCAACGCACTGTTCAACCGATAGTAACTGGATCATCAGTCC TTGCTTTGAAGTTTGCAGACGGTGTAATGATTGCTGCTGATAACCTGGCATCCTATGGAT CATTAGCGCGCTTTTATGATGTTGAACGGTTGACAAAAGTAGGTGATAATACGATTGTTG GCGCCGGTGGGGATATTTCGGATTATCAACAAATCCAGCGCCTATTAGAAAAATTAGAAA TAAAAGAAGGAAATTATGGTGACGGCTATGCCTTACAACCTTCGTATATTCATGAATACT TGTCGAAGGTGTTGTACGCTCGCAGAAACAAACTTGACCCATATTGGAATCAACTCATTG TAGCCGGGGTGGATGGGGAAAATAAGGAACCATATGTTGCTTTTGCAGATCTTCGAGGAA CTACTTATTCTGCCCCGGCAATCGCAACTGGGTTTGCCATGCATTTGGCTCTTCCTATGT TGCGTAAAGCCACTGACGATGATCGCTGGAAAACGCTTTCTAAAGAAAGCGCTCGTGCTA CTATCGATGAATGTATGCGTGTTTTGTTTTATAGGGATGCTAGAAGTTTAAACAAATTTA GTGTTGCTACCATTACACCTGAGGGCATCGAATTCCAGACTGATCAATCTGTCTCCTCCA AATGGGCATTTGCTGAAAAGCAGTATGGTTACGGGACTCAAACCGTATAATTTGCACATA GTAAAGCATTCATGAATAACAAAATGATATGCGATACAACAGAGATGAAAATGCGTTTTG AGATACTAAGCATTCTTTAAGCTCACGAAATACTTCCTAATTGATTCATTTTGGTGAATC GAATGGTAAAAAGATATAATTTTTTCCCTGATTGTAAACGGTATAAATAAACGAGCTCGA GTTTATTGTTCTCTCAAAGCATCCGCTAGATACTTTATGAATGAATTGGTTAACATGCAC TGCAACTTACTCTATATGATTACTGAATTGCATTTTATTTGCTTTTGGTTTCAACTTACG TATTGGAGCTAACATGACTTTTACTAGTTAGAGTAAGTTACCTTAAAAAGATGATGGAAG TAAATTGATCATCAATGAGTTGCTTTATGGTTTAATCGCTTGACCTAATAGTCTGTAAGA AATCCAACAATAATTAGGTAACGGTAGAAAGTTTACA
  • Download Fasta

  • Fasta :-

    MSFLELTEVWGKPQKDIFFPSGSEVEESTDAPIQRTVQPIVTGSSVLALKFADGVMIAAD NLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKLEIKEGNYGDGYALQP SYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLRGTTYSAPAIATGFAM HLALPMLRKATDDDRWKTLSKESARATIDECMRVLFYRDARSLNKFSVATITPEGIEFQT DQSVSSKWAFAEKQYGYGTQTV

  • title: active site
  • coordinates: S44,D60,L62,R76,F178,D219,S222,L223
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPBC577.10T290.5250.361SPBC577.10T360.5130.356
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPBC577.10T290.5250.361SPBC577.10T360.5130.356
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC577.10245 SDQSVSSKWA0.995unspSPBC577.10245 SDQSVSSKWA0.995unspSPBC577.10245 SDQSVSSKWA0.995unspSPBC577.10200 SWKTLSKESA0.99unspSPBC577.10203 SLSKESARAT0.993unsp

SPBC577.10      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India