SPBPB2B2.05 | peptidase family C26 protein

_IDPredictionOTHERSPmTPCS_Position
SPBPB2B2.05OTHER0.9229500.0750750.001976
No Results

  • Fasta :-

    >SPBPB2B2.05 MECPIIALSVGFSNNSQPYVEAIIKAGGCPIVIYPGLQRNSIPPNIDGIILAGGESVHPN RYGEDFDPNAPKSVDVIRDSTEWGMIDFALKKKIPILGICRGCQVLNVYFGGSLYQNVSS CGFRDIHRPSKPRHYLAHKVMAKPGKLKNILGSNVIDVNSIHDQGIKTLGMGLQSTVISD DGLCEGIESKDGLIIGVQWHPEAIIDKQPHSLKLFQYFINRSKWHMKQSNIFSNVPHESS FYRNSIISIPIAP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/203 Sequence name : 203 Sequence length : 253 VALUES OF COMPUTED PARAMETERS Coef20 : 3.658 CoefTot : -3.007 ChDiff : 3 ZoneTo : 46 KR : 2 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.706 1.300 0.151 0.531 MesoH : -0.748 0.105 -0.363 0.207 MuHd_075 : 34.275 28.587 9.426 8.552 MuHd_095 : 29.310 20.063 9.054 6.684 MuHd_100 : 29.941 20.775 9.357 6.048 MuHd_105 : 27.500 19.582 8.723 5.922 Hmax_075 : 14.200 24.150 3.487 5.780 Hmax_095 : 13.737 15.225 2.776 5.373 Hmax_100 : 14.700 14.000 3.012 5.220 Hmax_105 : 9.217 12.700 2.602 6.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9693 0.0307 DFMC : 0.9867 0.0133
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 253 SPBPB2B2.05 MECPIIALSVGFSNNSQPYVEAIIKAGGCPIVIYPGLQRNSIPPNIDGIILAGGESVHPNRYGEDFDPNAPKSVDVIRDS 80 TEWGMIDFALKKKIPILGICRGCQVLNVYFGGSLYQNVSSCGFRDIHRPSKPRHYLAHKVMAKPGKLKNILGSNVIDVNS 160 IHDQGIKTLGMGLQSTVISDDGLCEGIESKDGLIIGVQWHPEAIIDKQPHSLKLFQYFINRSKWHMKQSNIFSNVPHESS 240 FYRNSIISIPIAP 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBPB2B2.05 25 YVEAIIK|AG 0.058 . SPBPB2B2.05 39 IYPGLQR|NS 0.067 . SPBPB2B2.05 61 ESVHPNR|YG 0.109 . SPBPB2B2.05 72 FDPNAPK|SV 0.145 . SPBPB2B2.05 78 KSVDVIR|DS 0.132 . SPBPB2B2.05 91 MIDFALK|KK 0.064 . SPBPB2B2.05 92 IDFALKK|KI 0.084 . SPBPB2B2.05 93 DFALKKK|IP 0.085 . SPBPB2B2.05 101 PILGICR|GC 0.069 . SPBPB2B2.05 124 VSSCGFR|DI 0.115 . SPBPB2B2.05 128 GFRDIHR|PS 0.073 . SPBPB2B2.05 131 DIHRPSK|PR 0.106 . SPBPB2B2.05 133 HRPSKPR|HY 0.113 . SPBPB2B2.05 139 RHYLAHK|VM 0.057 . SPBPB2B2.05 143 AHKVMAK|PG 0.059 . SPBPB2B2.05 146 VMAKPGK|LK 0.070 . SPBPB2B2.05 148 AKPGKLK|NI 0.062 . SPBPB2B2.05 167 IHDQGIK|TL 0.071 . SPBPB2B2.05 190 CEGIESK|DG 0.066 . SPBPB2B2.05 207 PEAIIDK|QP 0.059 . SPBPB2B2.05 213 KQPHSLK|LF 0.058 . SPBPB2B2.05 221 FQYFINR|SK 0.110 . SPBPB2B2.05 223 YFINRSK|WH 0.060 . SPBPB2B2.05 227 RSKWHMK|QS 0.076 . SPBPB2B2.05 243 HESSFYR|NS 0.131 . ____________________________^_________________

  • Fasta :-

    >SPBPB2B2.05 TTCTAGAATGTTCAAAATTACTTTGGACAGAAACAAAGTCTCATATTTTCTGAACTCGTA TAATTTTTTATTAATTCAATTTTTGTCATTCCCGCTTTCCGCAATTGGCTCATACCTTGA AACAATAGCGGGTCGTTGTGCGTTTTTGAGGCATTTTAGTTGATACTAAATTAAGCGATA AGAAACCAATATATATATATCCAAGTATGGTGATAATTTTATAGCGAAATAGAAAAGATG GAATGCCCTATTATTGCTTTGAGTGTCGGGTTTTCTAATAACTCACAGCCGTATGTAGAA GCAATTATCAAGGCAGGTGGTTGTCCAATTGTCATATATCCTGGATTACAAAGAAACAGT ATCCCACCTAATATAGATGGTATAATACTAGCTGGTGGTGAATCGGTGCATCCAAACCGA TACGGAGAAGATTTTGATCCAAATGCTCCCAAAAGTGTCGATGTGATAAGAGATTCCACA GAATGGGGAATGATTGATTTTGCCCTCAAAAAAAAAATCCCTATCCTTGGAATATGTCGT GGTTGTCAAGTCCTTAATGTATATTTTGGAGGAAGTCTATACCAAAATGTTTCATCTTGC GGTTTTCGTGATATTCATCGTCCAAGTAAACCTAGGCATTATTTAGCTCATAAAGTAATG GCTAAACCTGGAAAACTTAAAAACATTTTGGGATCGAATGTTATAGATGTAAACAGTATT CATGATCAGGGTATCAAAACTTTGGGAATGGGTTTGCAATCAACTGTTATCTCTGACGAC GGACTTTGTGAAGGAATCGAATCAAAAGATGGTTTAATCATTGGTGTACAATGGCACCCA GAAGCAATCATCGATAAACAACCGCATAGCTTAAAATTATTTCAATATTTTATAAACCGC TCAAAGTGGCATATGAAACAATCCAATATATTTTCTAATGTTCCCCACGAGTCAAGTTTT TACCGAAATTCAATAATCTCTATTCCAATTGCTCCCTAAGTACTTGCTTGCTCTTTTTTT TTGCTGAAGTGAATTTTCGGATTGTTGAGAATTTCAGTGTTGTCATTATGTTGTATTTAA TTCAAATGGAAAGTCC
  • Download Fasta

  • Fasta :-

    MECPIIALSVGFSNNSQPYVEAIIKAGGCPIVIYPGLQRNSIPPNIDGIILAGGESVHPN RYGEDFDPNAPKSVDVIRDSTEWGMIDFALKKKIPILGICRGCQVLNVYFGGSLYQNVSS CGFRDIHRPSKPRHYLAHKVMAKPGKLKNILGSNVIDVNSIHDQGIKTLGMGLQSTVISD DGLCEGIESKDGLIIGVQWHPEAIIDKQPHSLKLFQYFINRSKWHMKQSNIFSNVPHESS FYRNSIISIPIAP

  • title: catalytic triad
  • coordinates: C100,H200,E202
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBPB2B2.0580 SVIRDSTEWG0.997unspSPBPB2B2.05130 SIHRPSKPRH0.991unsp

SPBPB2B2.05      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India