SPCC1442.06 | 20S proteasome complex subunit alpha 2, Pre8 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPCC1442.06OTHER0.9992790.0004850.000235
No Results

  • Fasta :-

    >SPCC1442.06 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGAS LEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQE STQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND ELELDDAVHTAILALKETFEGELTEDNIEIAVVSTKPTDSGIVGVPGGHFCRLSQSEIRD YLDQV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/467 Sequence name : 467 Sequence length : 245 VALUES OF COMPUTED PARAMETERS Coef20 : 3.814 CoefTot : -1.277 ChDiff : -7 ZoneTo : 40 KR : 3 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.959 1.159 0.142 0.471 MesoH : -0.248 0.479 -0.274 0.268 MuHd_075 : 16.131 10.563 4.446 2.999 MuHd_095 : 24.904 21.499 8.453 5.916 MuHd_100 : 18.502 20.399 6.359 4.988 MuHd_105 : 21.471 24.059 7.179 6.071 Hmax_075 : 6.125 19.717 1.180 4.573 Hmax_095 : 16.300 22.300 4.184 6.900 Hmax_100 : 16.300 26.500 4.184 7.520 Hmax_105 : 12.833 22.838 4.206 7.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9550 0.0450 DFMC : 0.9652 0.0348
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 245 SPCC1442.06 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGP 80 DFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKA 160 TAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEGELTEDNIEIAVVSTKPTDSGIVGVPGGHFCRLSQSEIRD 240 YLDQV 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPCC1442.06 4 ---MTDK|YA 0.070 . SPCC1442.06 17 TFSPNGK|LV 0.076 . SPCC1442.06 38 VTSVGIK|AT 0.079 . SPCC1442.06 49 VVLATEK|KP 0.055 . SPCC1442.06 50 VLATEKK|PT 0.097 . SPCC1442.06 63 IGASLEK|VC 0.054 . SPCC1442.06 83 GMGPDFR|VL 0.080 . SPCC1442.06 88 FRVLVDK|SR 0.097 . SPCC1442.06 90 VLVDKSR|KV 0.101 . SPCC1442.06 91 LVDKSRK|VA 0.082 . SPCC1442.06 98 VAQTTYK|KI 0.068 . SPCC1442.06 99 AQTTYKK|IY 0.086 . SPCC1442.06 108 NEYPPTK|IL 0.072 . SPCC1442.06 128 TQSGGVR|PF 0.141 . SPCC1442.06 142 VAGMDEK|GP 0.062 . SPCC1442.06 159 GTYFAWK|AT 0.077 . SPCC1442.06 165 KATAIGK|SS 0.081 . SPCC1442.06 171 KSSTAAK|TF 0.074 . SPCC1442.06 176 AKTFLEK|RY 0.061 . SPCC1442.06 177 KTFLEKR|YN 0.219 . SPCC1442.06 196 TAILALK|ET 0.080 . SPCC1442.06 216 IAVVSTK|PT 0.083 . SPCC1442.06 232 PGGHFCR|LS 0.087 . SPCC1442.06 239 LSQSEIR|DY 0.115 . ____________________________^_________________

  • Fasta :-

    >SPCC1442.06 CAGTCAACAGTCTTCTTGAACGATTGATCCTTTACCAAGCACCACTTAGCAAATAACGGC TTTTTCCGTTCTTTTTAGTGAATTCATATGACTGATAAATACGCGTTCTCCCTTACTACA TTTTCACCTAACGGTAAACTCGTTCAAATCGAGTATGCTTTGAATGCAGTCAATGCTGGT GTTACGTCTGTTGGAATTAAAGCTACCGACGGTGTAGTTTTGGCGACAGAAAAAAAACCC ACTAGTGAGTTAGCGATCGGTGCTTCATTGGAAAAAGTTTGTGCTATTACTCCAGACATT GGCATGGTTTATAGTGGTATGGGCCCCGATTTTCGAGTGCTCGTGGATAAATCGCGGAAA GTCGCACAAACCACATATAAAAAAATATATAACGAGTATCCCCCTACTAAAATACTCGTC CAGGAAATTGCTTCAGTTATGCAAGAGTCTACACAATCTGGTGGTGTTCGTCCGTTTGGT GTTAGTCTCTTGGTTGCAGGAATGGATGAAAAAGGTCCTTCTCTCTATCAAGTTGATCCT TCGGGCACCTATTTTGCTTGGAAAGCCACAGCTATCGGCAAATCATCTACAGCTGCTAAA ACATTTTTAGAAAAGCGTTACAATGATGAACTTGAGTTGGATGATGCCGTGCATACAGCT ATTTTAGCTTTAAAAGAAACTTTTGAGGGTGAATTAACTGAAGATAACATCGAGATCGCA GTAGTCTCTACGAAACCTACGGATAGTGGAATCGTTGGCGTACCAGGCGGACATTTTTGT CGATTGTCCCAGTCGGAGATTCGTGATTATCTCGACCAAGTATAAAGTTGAAAGTGTTAG GTTTATTTTTTCTTTATATTTCCTATACAAAAAAAGCACTAGCAATGTTTTGTTGCAAAA GTTGCTTTTTAAGTCCATTTTCACTTTCTTATTCAGTAACAACTTACATGAAAAAGACAC GAGTTCGTCCACCCTTTGTCCATGAGATTCCAAGGTATTAGTTGTTTTTTTAAACTTACG TATGGTATTACACAGCCTGAAATTAGAAAGACTCATACTAGTGATAGCTGCTATATTCTA TGACATGAATTAGATTTACGATTCCCAAACAATACGGTTCCTTTATTCTGTATAGTACAA ATCACTCCAAATGTTTAACAACAAGACAGCATTCATTAGAAGAAACTATAAACATAGACA ATAAATAGGGGAATTTGAAAATATAAGTAGTAAAGAATCCATTACTCCTTTTGGACTTTA CTACCTGATTGCTTCCGCCTCTCCGCAGCGGCCAGCAGTAAGTCTCGTCTGTGGTTCTTT TGATCTTCATCGTCATTATCCTGTTGAGGAGTATAACTAGCTCGGTCACTAACATAACTA CCAGGTTTGCCAAGCAAATCTGCTGCATCTGCTTCCTTTGTTAGTTGACGAAACAGCTCC CAAAAGGAGGAGTCGTGTTCTCCATGAACATTATGCGTCAATTCGTGAATTAATGTACTT TTCACAGTTTTGTAATCTCGAAAACCATCGTAACGGTCTGTACGTAAACGTAATTCAATA TGTGCACCTTGATTATGATTGAGTCCCAGAGTTTTAGAGTCATGTCGAGTATGTTCAGCA GGGTCCATTTCACTAAGTAACGGGACAGTCCAGCGATGAGAATCCATAATTTTTTTAATG CCTGTATCGTCTCGCAGCCTTTCTAAATATCTCAAGGCACGATCCTTGTGAGGATAATCT AAAACCACAAGTTCATTAAATGTGTATATACTTGCAGGCTTTGGTGTAGTATGAGGCTTC TTCGGTTTCAAGCTGTATGTATTCGTGCTATAATCAGGGACCTTCAATTGAGAAATGGCT TGATTGACAATGTCTTTATCTTGTCTAATTAGACACATAATCTTCGATTCGTTTTTGACT ACATCTTGTAAATGTGAGTCATCTGAAAGATTCCCTTTGTAGAGCAGCTTAATCAAACTT GGAGACACATCTATTTCTTGGCCAAGTTTCTCTTTAGCATCCAGCACAGTATCATTCTCA TTAAATGAAAGAGCAATTACATTTCCTCTGCA
  • Download Fasta

  • Fasta :-

    MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGAS LEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQE STQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND ELELDDAVHTAILALKETFEGELTEDNIEIAVVSTKPTDSGIVGVPGGHFCRLSQSEIRD YLDQV

  • title: active site
  • coordinates: V32,E48,K50,K63,K165
IDSitePositionGscoreIscore
SPCC1442.06T20.5050.154
IDSitePositionGscoreIscore
SPCC1442.06T20.5050.154
No Results

SPCC1442.06      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India