SPCC1840.04 | metacaspase Pca1

UniProt_ID: O74477

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs: GO:0005737 GO:0005829 GO:0005634
Curated_GO_Components: cytoplasm cytosol nucleus
Curated_GO_Function_IDs: GO:0004197
Curated_GO_Functions: cysteine-type endopeptidase activity
Curated_GO_Processes: apoptotic process proteolysis involved in cellular protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	SPCC1840.04	OTHER	0.999993	0.000007	0.000000

No Results

Fasta :-
>SPCC1840.04 MSYNSNPYNGGQYPPYNTYTRPNYSPNNGSQSNNTVHQYQPPRMPPPSTRPQTDGNSNQI PMENVGHISLSSANSHAYAPPSGPPPNTGANSYGNPNYSGPQLPNTQTQSYNLAGGGNFQ YQYSTCQGKRKALLIGINYLNTQNELQGCINDVMSMSQLLIQRYGYKQEDMVIMTDTASN QRAIPTRQNMLDAMRWLVSDAQPNDALFFHYSGHGGQTKDLDGDEVDGYDETIYPLDHQY AGQIIDDEMHEIMVKPLPAGCRLTALFDSCHSGGALDLPFTYSTKGVLKEPNMLKESGMD VLHAGLSYASGDIMGAINNVKNIFTSATNGFNNNALQYSRQVKFSPADVISLSGCKDNQT SADTSVNGFATGALSYAFREVVTQNPQLSYLQLLRGIRQVLSNKYSQLPQLSCSHPLDMN LAMVL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/363 Sequence name : 363 Sequence length : 425 VALUES OF COMPUTED PARAMETERS Coef20 : 2.492 CoefTot : -5.775 ChDiff : -8 ZoneTo : 53 KR : 3 DE : 0 CleavSite : 52 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.818 1.018 0.012 0.508 MesoH : -0.407 0.204 -0.343 0.205 MuHd_075 : 23.174 13.676 8.097 5.020 MuHd_095 : 21.141 14.789 6.826 4.707 MuHd_100 : 21.361 15.311 8.085 4.567 MuHd_105 : 26.737 16.464 8.855 5.705 Hmax_075 : 4.783 -3.733 -2.176 1.062 Hmax_095 : 1.488 -3.900 -2.117 1.444 Hmax_100 : 0.500 -3.300 -1.814 0.820 Hmax_105 : 4.550 -0.117 0.127 1.703 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8501 0.1499 DFMC : 0.8752 0.1248

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 425 SPCC1840.04 MSYNSNPYNGGQYPPYNTYTRPNYSPNNGSQSNNTVHQYQPPRMPPPSTRPQTDGNSNQIPMENVGHISLSSANSHAYAP 80 PSGPPPNTGANSYGNPNYSGPQLPNTQTQSYNLAGGGNFQYQYSTCQGKRKALLIGINYLNTQNELQGCINDVMSMSQLL 160 IQRYGYKQEDMVIMTDTASNQRAIPTRQNMLDAMRWLVSDAQPNDALFFHYSGHGGQTKDLDGDEVDGYDETIYPLDHQY 240 AGQIIDDEMHEIMVKPLPAGCRLTALFDSCHSGGALDLPFTYSTKGVLKEPNMLKESGMDVLHAGLSYASGDIMGAINNV 320 KNIFTSATNGFNNNALQYSRQVKFSPADVISLSGCKDNQTSADTSVNGFATGALSYAFREVVTQNPQLSYLQLLRGIRQV 400 LSNKYSQLPQLSCSHPLDMNLAMVL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPCC1840.04 21 PYNTYTR|PN 0.081 . SPCC1840.04 43 HQYQPPR|MP 0.087 . SPCC1840.04 50 MPPPSTR|PQ 0.118 . SPCC1840.04 129 YSTCQGK|RK 0.055 . SPCC1840.04 130 STCQGKR|KA 0.149 . SPCC1840.04 131 TCQGKRK|AL 0.121 . SPCC1840.04 163 SQLLIQR|YG 0.105 . SPCC1840.04 167 IQRYGYK|QE 0.073 . SPCC1840.04 182 DTASNQR|AI 0.088 . SPCC1840.04 187 QRAIPTR|QN 0.098 . SPCC1840.04 195 NMLDAMR|WL 0.067 . SPCC1840.04 219 GHGGQTK|DL 0.093 . SPCC1840.04 255 MHEIMVK|PL 0.062 . SPCC1840.04 262 PLPAGCR|LT 0.071 . SPCC1840.04 285 PFTYSTK|GV 0.078 . SPCC1840.04 289 STKGVLK|EP 0.060 . SPCC1840.04 295 KEPNMLK|ES 0.062 . SPCC1840.04 321 GAINNVK|NI 0.068 . SPCC1840.04 340 NALQYSR|QV 0.093 . SPCC1840.04 343 QYSRQVK|FS 0.166 . SPCC1840.04 356 ISLSGCK|DN 0.066 . SPCC1840.04 379 ALSYAFR|EV 0.190 . SPCC1840.04 395 SYLQLLR|GI 0.107 . SPCC1840.04 398 QLLRGIR|QV 0.180 . SPCC1840.04 404 RQVLSNK|YS 0.059 . ____________________________^_________________

Fasta :-
>SPCC1840.04 CCTGTGAGATCTGGTATTTTATTGAAAGTAGCATAGTTAAGCACTATCCAACTTCCCATC AACATGAGCTACAACTCCAATCCTTATAACGGTGGGCAATATCCACCATATAATACATAT ACTAGACCTAATTATTCACCAAATAATGGTTCTCAAAGTAATAACACTGTACATCAATAT CAGCCTCCACGTATGCCACCCCCTTCCACAAGGCCTCAGACAGACGGCAATTCTAATCAA ATCCCTATGGAGAATGTTGGTCATATAAGTTTGAGCTCTGCAAACTCCCATGCTTATGCC CCACCCTCAGGTCCGCCTCCGAATACTGGTGCTAATTCTTATGGCAACCCAAATTATAGT GGGCCTCAGCTGCCAAACACTCAGACTCAATCTTATAACTTAGCAGGAGGAGGAAACTTT CAGTATCAGTATTCAACTTGCCAAGGGAAGCGAAAGGCTTTGCTGATCGGAATTAACTAT CTCAATACCCAAAATGAGTTGCAAGGTTGCATTAATGATGTCATGTCTATGTCCCAACTG CTGATACAGCGCTACGGTTACAAGCAAGAAGATATGGTTATTATGACAGACACGGCAAGC AACCAAAGGGCAATTCCCACTCGTCAAAATATGTTAGATGCGATGAGATGGTTAGTAAGT GATGCCCAACCTAATGATGCATTATTTTTTCACTATAGTGGCCACGGAGGGCAAACAAAA GACCTTGATGGAGACGAAGTTGATGGTTATGATGAAACGATATATCCACTGGACCATCAA TATGCCGGGCAAATTATAGATGATGAAATGCACGAAATAATGGTTAAGCCTTTACCAGCA GGATGTCGTTTAACAGCTCTCTTTGACTCTTGTCATTCAGGTGGAGCTCTCGATCTTCCT TTCACGTACTCTACCAAGGGCGTTCTAAAGGAGCCAAATATGTTAAAAGAATCTGGTATG GATGTACTTCATGCTGGCCTTTCTTATGCCTCTGGCGACATTATGGGAGCTATCAACAAC GTGAAAAATATATTTACCAGTGCTACCAATGGATTTAATAACAACGCTCTACAGTACTCT AGACAAGTTAAGTTTTCTCCTGCTGATGTTATTTCTTTATCCGGATGCAAAGATAATCAA ACAAGCGCAGATACAAGTGTTAATGGATTCGCTACTGGTGCTTTATCATACGCCTTCCGT GAAGTCGTCACTCAAAATCCCCAACTTAGCTACTTGCAGTTGCTGAGAGGTATTCGACAA GTACTTTCCAACAAATACTCACAACTGCCCCAATTAAGTTGTAGTCATCCTTTAGACATG AATCTTGCCATGGTTTTATAGTACACTAAACATTACTTGATCATTGAAGTTCTATATTTT TGTAGTTCCATCAGATATTTAAGGAATTTTCAATTAAGGATAAAATTTAAATCACAACAA CTCAGGAAATCATATCTAATACTTTATTGAAATATTTTTGTTTGCAATTTATAATTTTGC TTAAAAAACGAGCTCAAATTAAAATTATACACGCGAGAAAACTCATGGCTCTTCCAGTCC GTTCTGTTGGGGATGAAACCATTCAGATTTGATAGCCTGTTTAACTTCTGTAGCATTCTT TATGGAATCTTCAAGCGAATGTCCGCGAGCACAGATATAAAACTTAAGTTTCGGCTCTGT ACCACTTGTGCGAATAGTCATAATTACCTCTCCATTTTCAAGCTCAAACGTTACGTTATC TGAACTTTTTGAAACTGGTAAAGTAGCTTTACCATCCGTGGAGCTTGAGTCGTAACCTGT AGTAAGGTCGCGAACATTTGTAATTTTCTTACTACCAAGGGTTGCCGGATAACCCGATTT TGTGTCATAATGTCTCAAGGCATCAACCAAAGCACGAAGCTTGGGAGTGTCGCGTGAAAG GAAATATGAGTTTTGCGTAGTGTAATAACCATATTTTTTAGACATTTGCTCAAAAACCTC GGTAATTGAAAGATTCTGAAGTTGAAGGCGTTTCAAAAGATGAAGGAACGTAATCAAAGC ATTAACCCCGTCTTTGTCTCTAACTATACTACCTACCATATAACCAAGAGCTTCTTCATA TGCCAATCCAATAAATTTCCCTTGTTTTTCCAATTCTAATGCTTTATTGCCTAACCACTT AAATCCAGTAAGTGTTTCAACATGATGGAATCCTTCTACTTTGGCCATGGACTTTACCAT AGCACTAGAGACAGTAGTTGACAAAACGTAAAAATCATCAATTGGCTTTCCAACGTTTTT GTATTCTTGAAATATAAAATAGGCAAGGATACAACCAACTTCATCTCCGGTAAATCTTCT CCAAGCACCATTAATTTTTTCTGCAAAGGCGAAACGATCTGCGTCAGGATCAGTTGCAAG GACATACGAAATACCATTAGCATCAGCTTGCTCGTAAGCCAAATCCAATGCCCCCTCCTC TTCTGGATTTGGAAATTTCACAGTCGGAAAGTCAGGGTTTGGAGAATCTTGAAGAGGTAC AGAAATCATATCGCCTTGTTCGCCAAATAAGTGTAATGCTGAAGTAACAAATGGTAATCC AACGCCATGAATAGGAGTGTAAACAAATTTCAAAGATTTCATTTCCAAGGAAAAGTTGTT TTCGGAATGGAATTCGTGGAGCTGAGACCAATAGTTTTTTAAAAGACCAACTGCAAAATC CCGATCTGCTAGTTTATGATTTTCAACCAAATTTTTGTCCCAAGTAATGGGCGTTAAGTT TTTTTCTATACATGCAGCAATTCCCTTGTCATGGGGAGGAATGATAGCACAACCGTTTCC CCAATAGACCTTGTATCCGTTATAAGCTGCGGGATTATGGGAAGCAGTAATCATAACACC AGCTGCAGTCCCTAGGGTTTTAACGGCAAAAGGGACTAAAGGGGTATGGACAAGATGATC GAAGAAATACGTTTTGAATCCTTTTTGCAAGAACACTGCAGCAGTAAGTCGAGCAAAAGT ATTAGACTTATGCCTATGATCGTGTCCAATTACCACACCCAGCTTTGCAGCTGATGGTAC GGTTTGAAGCAAATACTCAGCGAAGCCTTGTGAGGCTTGAATCACGGTCAAACAGTTCAT GCGAGCGAAGCCAGCACCAATTTCAGCTCTCAAACCTTTGTAAACATTAGTAAATGAATA AACGAACTTG
Download Fasta

Fasta :-

MSYNSNPYNGGQYPPYNTYTRPNYSPNNGSQSNNTVHQYQPPRMPPPSTRPQTDGNSNQI PMENVGHISLSSANSHAYAPPSGPPPNTGANSYGNPNYSGPQLPNTQTQSYNLAGGGNFQ YQYSTCQGKRKALLIGINYLNTQNELQGCINDVMSMSQLLIQRYGYKQEDMVIMTDTASN QRAIPTRQNMLDAMRWLVSDAQPNDALFFHYSGHGGQTKDLDGDEVDGYDETIYPLDHQY AGQIIDDEMHEIMVKPLPAGCRLTALFDSCHSGGALDLPFTYSTKGVLKEPNMLKESGMD VLHAGLSYASGDIMGAINNVKNIFTSATNGFNNNALQYSRQVKFSPADVISLSGCKDNQT SADTSVNGFATGALSYAFREVVTQNPQLSYLQLLRGIRQVLSNKYSQLPQLSCSHPLDMN LAMVL

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	SPCC1840.04	T	88	0.581	0.092	SPCC1840.04	T	35	0.567	0.016	SPCC1840.04	T	49	0.565	0.334	SPCC1840.04	T	53	0.555	0.062

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	SPCC1840.04	T	88	0.581	0.092	SPCC1840.04	T	35	0.567	0.016	SPCC1840.04	T	49	0.565	0.334	SPCC1840.04	T	53	0.555	0.062

	ID	Site	Peptide	Score	Method
	SPCC1840.04	345 S	QVKFSPADV	0.995	unsp

SPCC1840.04 | metacaspase Pca1

ID's

UniProt_ID: O74477

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs: GO:0005737 GO:0005829 GO:0005634

Curated_GO_Components: cytoplasm cytosol nucleus

Curated_GO_Function_IDs: GO:0004197

Curated_GO_Functions: cysteine-type endopeptidase activity

Curated_GO_Processes: apoptotic process proteolysis involved in cellular protein catabolic process

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

SPCC1840.04

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India