SPCC320.12 | mitochondrial inner membrane peptidase Atp23 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPCC320.12OTHER0.9994310.0004000.000169
No Results

  • Fasta :-

    >SPCC320.12 MSEDPQSWSKERKNCERVKRALMSQSPVIIFLKTALDRLNCNIEAKDISCQPCDAQSTGG YIPGKGIVLCENRLYTKKMAENTIAHEMIHMFDDHRFEVDWNNLRHQACSEIRASSMSGE CRWTKELRFGNIKTFRKHHQECVKRRATISVQGNPNCKSKEQAEAIVEEVFNSCFNDFRP FEKIY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/749 Sequence name : 749 Sequence length : 185 VALUES OF COMPUTED PARAMETERS Coef20 : 3.757 CoefTot : 0.112 ChDiff : 4 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.447 1.065 -0.073 0.396 MesoH : -1.187 -0.031 -0.496 0.070 MuHd_075 : 23.073 8.892 6.033 4.249 MuHd_095 : 8.533 8.192 4.428 3.819 MuHd_100 : 24.678 14.943 7.885 6.049 MuHd_105 : 34.399 18.343 10.225 6.966 Hmax_075 : -9.100 -6.300 -4.214 -1.645 Hmax_095 : -18.500 -5.500 -5.654 -0.360 Hmax_100 : -6.900 -0.100 -3.076 1.020 Hmax_105 : -4.000 -3.150 -2.371 0.210 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9670 0.0330 DFMC : 0.9445 0.0555
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 185 SPCC320.12 MSEDPQSWSKERKNCERVKRALMSQSPVIIFLKTALDRLNCNIEAKDISCQPCDAQSTGGYIPGKGIVLCENRLYTKKMA 80 ENTIAHEMIHMFDDHRFEVDWNNLRHQACSEIRASSMSGECRWTKELRFGNIKTFRKHHQECVKRRATISVQGNPNCKSK 160 EQAEAIVEEVFNSCFNDFRPFEKIY 240 ...................P............................................................ 80 ................................................................................ 160 ......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPCC320.12 10 DPQSWSK|ER 0.061 . SPCC320.12 12 QSWSKER|KN 0.089 . SPCC320.12 13 SWSKERK|NC 0.151 . SPCC320.12 17 ERKNCER|VK 0.103 . SPCC320.12 19 KNCERVK|RA 0.067 . SPCC320.12 20 NCERVKR|AL 0.633 *ProP* SPCC320.12 33 PVIIFLK|TA 0.064 . SPCC320.12 38 LKTALDR|LN 0.083 . SPCC320.12 46 NCNIEAK|DI 0.103 . SPCC320.12 65 GGYIPGK|GI 0.073 . SPCC320.12 73 IVLCENR|LY 0.074 . SPCC320.12 77 ENRLYTK|KM 0.057 . SPCC320.12 78 NRLYTKK|MA 0.140 . SPCC320.12 96 HMFDDHR|FE 0.074 . SPCC320.12 105 VDWNNLR|HQ 0.071 . SPCC320.12 113 QACSEIR|AS 0.104 . SPCC320.12 122 SMSGECR|WT 0.125 . SPCC320.12 125 GECRWTK|EL 0.117 . SPCC320.12 128 RWTKELR|FG 0.090 . SPCC320.12 133 LRFGNIK|TF 0.061 . SPCC320.12 136 GNIKTFR|KH 0.107 . SPCC320.12 137 NIKTFRK|HH 0.077 . SPCC320.12 144 HHQECVK|RR 0.061 . SPCC320.12 145 HQECVKR|RA 0.209 . SPCC320.12 146 QECVKRR|AT 0.248 . SPCC320.12 158 QGNPNCK|SK 0.113 . SPCC320.12 160 NPNCKSK|EQ 0.080 . SPCC320.12 179 SCFNDFR|PF 0.098 . SPCC320.12 183 DFRPFEK|IY 0.067 . ____________________________^_________________

  • Fasta :-

    >SPCC320.12 TTTTATGTGAAAGAGCTTGCAATCTGATACACATAGCAGGGTTCAGCAGACTGTGAATAG GAAAAAAAGTCGATACTCCCTCACTTTGCAGTCCATGGGCTCGGAAAGGGTGTAATCTTT CTTATATATTTACGAAGAACTTCACTAGTGTTTTCCCTCTGTCGATCACTATTTTCGGGG TTTCGCCTGTTCATGCGAATTGCTACTCAACCACCTAATGTTGTACAGGTAAAATTTATT AATTGACATTTATTAGAGATATCGTTTGTTGTCTCCATAAACTCCTTTGAAGGCCTTTTT ATAAGAATTAAGGAAACGTGCATTTAGATATGAGCGAAGATCCACAAAGTTGGTCGAAAG AGAGGAAAAATTGTGAGCGCGTAAAGCGCGCTTTAATGTCCCAATCTCCAGTAATTATTT TTTTAAAAACTGCCTTGGATCGTTTGAATTGCAACATTGAAGCTAAAGACATTTCTTGCC AGCCTTGTGATGCACAAAGTACTGGAGGTTACATTCCCGGTAAAGGGATAGTTCTGTGTG AAAACAGACTTTATACTAAAAAAATGGCAGAGAATACAATTGCCCATGAAATGATACACA TGTTTGACGACCACAGGTTTGAAGTCGATTGGAACAATTTGAGACATCAGGCTTGTTCAG AAATTCGTGCTAGTAGTATGAGTGGTGAGTGTCGCTGGACCAAAGAACTTCGTTTTGGTA ACATTAAAACTTTTCGGAAGCATCATCAAGAATGCGTCAAACGACGAGCTACTATCTCCG TACAAGGTAACCCGAATTGTAAAAGCAAAGAGCAAGCAGAAGCAATCGTTGAAGAAGTGT TCAATTCCTGTTTCAACGATTTCAGGCCTTTTGAAAAAATCTATTGAAATACCAGTTTAC AAAAGTCAGATAGTTATTATGTCAACTCCCTTCCCCTCCCATTTTATAATATCCCGTACA GCATTTACGTTGGCTTTTAAAAAATATCGAAGCATACTTCTCACTTGTTATGCAACTTAT TATGTGCTTGGCGTACTTTATCTTTATACATATTGTAACAGTTTTTTTGGAAGTTATTAT TAGCTTGGCTAAAGTGATGATAAATTTTTAAATAGTTTTTATTAGGAAAATGAATGTCTT CTAAGTGATTTCGAAAAGAAAATCTGGA
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  • Fasta :-

    MSEDPQSWSKERKNCERVKRALMSQSPVIIFLKTALDRLNCNIEAKDISCQPCDAQSTGG YIPGKGIVLCENRLYTKKMAENTIAHEMIHMFDDHRFEVDWNNLRHQACSEIRASSMSGE CRWTKELRFGNIKTFRKHHQECVKRRATISVQGNPNCKSKEQAEAIVEEVFNSCFNDFRP FEKIY

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPCC320.127 SEDPQSWSKE0.991unspSPCC320.12116 SIRASSMSGE0.992unsp

SPCC330.17c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India