SPCC757.03c | glyoxylase III Hsp3101

_IDPredictionOTHERSPmTPCS_Position
SPCC757.03cOTHER0.9994800.0004600.000060
No Results

  • Fasta :-

    >SPCC757.03c MASEGKVLLVASSYYGPFYPDGMNTGVHFAELLIPYQVFREAGYEVQLTSETGKCKFDDH SIKKSALGEVERDAFDNKDNEFWYALKDIKPADKINYKEFCIMFIAGGHAAMFDLPHATN LQTLAQQIYASNGVLAAVCHGPVMLPFVDDTKSPEGRSVVYGKKVTAFNSTGELVMGVSS ALRERNMQDLNSLFREAGAEFVDPPTPMSDFTQVDGRIVTGVNPMSAKSTAEAAIKVSQS LRKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/508 Sequence name : 508 Sequence length : 244 VALUES OF COMPUTED PARAMETERS Coef20 : 3.404 CoefTot : -0.961 ChDiff : -6 ZoneTo : 20 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.371 1.441 0.134 0.630 MesoH : -0.105 0.403 -0.289 0.279 MuHd_075 : 9.481 5.616 2.172 1.646 MuHd_095 : 2.925 6.076 0.696 1.433 MuHd_100 : 5.774 6.977 1.434 2.243 MuHd_105 : 9.341 7.237 2.088 3.259 Hmax_075 : 10.763 5.133 0.951 3.660 Hmax_095 : 10.500 7.263 1.245 4.043 Hmax_100 : 13.200 9.300 1.850 4.220 Hmax_105 : 11.500 9.100 0.675 4.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9939 0.0061 DFMC : 0.9903 0.0097
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 244 SPCC757.03c MASEGKVLLVASSYYGPFYPDGMNTGVHFAELLIPYQVFREAGYEVQLTSETGKCKFDDHSIKKSALGEVERDAFDNKDN 80 EFWYALKDIKPADKINYKEFCIMFIAGGHAAMFDLPHATNLQTLAQQIYASNGVLAAVCHGPVMLPFVDDTKSPEGRSVV 160 YGKKVTAFNSTGELVMGVSSALRERNMQDLNSLFREAGAEFVDPPTPMSDFTQVDGRIVTGVNPMSAKSTAEAAIKVSQS 240 LRKT 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPCC757.03c 6 -MASEGK|VL 0.056 . SPCC757.03c 40 IPYQVFR|EA 0.162 . SPCC757.03c 54 LTSETGK|CK 0.071 . SPCC757.03c 56 SETGKCK|FD 0.075 . SPCC757.03c 63 FDDHSIK|KS 0.063 . SPCC757.03c 64 DDHSIKK|SA 0.165 . SPCC757.03c 72 ALGEVER|DA 0.142 . SPCC757.03c 78 RDAFDNK|DN 0.072 . SPCC757.03c 87 EFWYALK|DI 0.069 . SPCC757.03c 90 YALKDIK|PA 0.067 . SPCC757.03c 94 DIKPADK|IN 0.064 . SPCC757.03c 98 ADKINYK|EF 0.063 . SPCC757.03c 152 PFVDDTK|SP 0.062 . SPCC757.03c 157 TKSPEGR|SV 0.366 . SPCC757.03c 163 RSVVYGK|KV 0.093 . SPCC757.03c 164 SVVYGKK|VT 0.074 . SPCC757.03c 183 GVSSALR|ER 0.075 . SPCC757.03c 185 SSALRER|NM 0.089 . SPCC757.03c 195 DLNSLFR|EA 0.139 . SPCC757.03c 217 FTQVDGR|IV 0.155 . SPCC757.03c 228 VNPMSAK|ST 0.086 . SPCC757.03c 236 TAEAAIK|VS 0.061 . SPCC757.03c 242 KVSQSLR|KT 0.108 . SPCC757.03c 243 VSQSLRK|T- 0.086 . ____________________________^_________________

  • Fasta :-

    >SPCC757.03c TCGTAATGGAAATTCATCCCGCTTTTGCAATTAAGTGATGTTTTTTTAAAATTTGTTATT TATTGAGGTGAAGCTGCAAAGATCACCCATTCATTATACACCATGGCATCAGAAGGAAAA GTACTTCTCGTGGCAAGCAGTTACTATGGACCATTTTATCCAGATGGAATGAATACTGGA GTTCACTTTGCGGAACTTTTGATTCCCTATCAAGTTTTCAGAGAAGCGGGTTATGAAGTT CAACTAACTTCAGAAACAGGAAAATGTAAATTCGACGACCATTCAATCAAAAAATCTGCC TTGGGTGAAGTGGAGAGGGATGCTTTTGACAACAAGGATAATGAGTTTTGGTATGCGCTG AAGGATATTAAGCCTGCCGATAAAATTAACTACAAAGAGTTCTGTATCATGTTTATTGCA GGAGGTCATGCAGCCATGTTTGATCTACCACATGCCACAAATTTGCAAACGCTTGCTCAA CAAATTTATGCAAGCAATGGTGTACTTGCTGCCGTCTGCCACGGTCCAGTTATGCTGCCT TTTGTAGATGACACCAAGTCACCAGAAGGACGTTCCGTCGTATATGGTAAGAAGGTTACC GCCTTCAATAGTACTGGAGAGCTTGTAATGGGTGTATCAAGTGCTTTGAGAGAAAGGAAC ATGCAAGATCTGAACAGCTTGTTTAGAGAAGCCGGTGCAGAGTTCGTTGACCCGCCTACC CCGATGTCCGATTTCACTCAGGTAGATGGAAGAATTGTAACAGGTGTGAATCCAATGAGT GCTAAATCTACAGCGGAGGCTGCCATAAAAGTTTCACAATCTCTTCGCAAGACATGAACC ATCCATTTTTGTAACGATTCTTTTTTTACTCTACCTGCTAAATGCCTTGATGAATTCGAC ATTGATGAAAGCGTATAATTGATGGCTTCAAAGATCGATCATTAGTTTTATTTCGATGAC TAAGAGACGGTTGTAAATAGCAACTTGAGCTTTAAAGACCAATATTAATGACACTTAAAT TTCTAGAATAGCGAGAGTTAATAGTGGAACAATTTATTGTTTTTGTTAGTAGCTGGATTT TATTGGATTTATTTATTATTTCCTTTTTATTTTAGATTGTTAGTTTTTGAACTAATTACG AACAGCTTGTGAGGTTTCAAAAATGACTTTTAACCATCCAACCAAGCAACCTTCCAAGCA ACCTTCCCATAAAGTTAACAGTTTATAGTCAGGTGTTCTAAAACAATTAGATA
  • Download Fasta

  • Fasta :-

    MASEGKVLLVASSYYGPFYPDGMNTGVHFAELLIPYQVFREAGYEVQLTSETGKCKFDDH SIKKSALGEVERDAFDNKDNEFWYALKDIKPADKINYKEFCIMFIAGGHAAMFDLPHATN LQTLAQQIYASNGVLAAVCHGPVMLPFVDDTKSPEGRSVVYGKKVTAFNSTGELVMGVSS ALRERNMQDLNSLFREAGAEFVDPPTPMSDFTQVDGRIVTGVNPMSAKSTAEAAIKVSQS LRKT

  • title: conserved cys residue
  • coordinates: C139
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPCC757.03cT2440.5880.019SPCC757.03cT2200.5440.060SPCC757.03cT2120.5390.041
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPCC757.03cT2440.5880.019SPCC757.03cT2200.5440.060SPCC757.03cT2120.5390.041
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPCC757.03c61 SFDDHSIKKS0.992unspSPCC757.03c229 SMSAKSTAEA0.99unsp

SPCC757.03c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India