SPCC757.05c | peptidase family M20 protein

_IDPredictionOTHERSPmTPCS_Position
SPCC757.05cSP0.0133030.9863400.000357CS pos: 25-26. VLA-GP. Pr: 0.9788
No Results

  • Fasta :-

    >SPCC757.05c MTMKISVWSLLIVIGYHLWMSPVLAGPLNFGYLSWGQHSILEQDSVQLISHQSLLPAGDN LISLHKSLVEIESLGGNEVNVSDFLKSYLESKGLTVELQRVSSNPTVRDNVYAYLGSQRN TKVVLTSHIDTVNPFLPYYIEGDKIHGRGSCDAKSSVAAQIFAMLELMSEGKVQEGDLSL LFVVGEEIDGIGMKTVANKLNADWEVAIFGEPTENKLGVGHKGNFRFDVYAHGKACHSGY PQEGFSAIEFLLRQCVKLMDTDLPKSKLLGPSTINIGTIEGGAAANILAAEAKAEVFIRV AEDIETIRDIAEDLFDTEHSEIKVIQYSPPQYLDYDIPGMDTVVLAYATDIPYLSDRKMK IYLFGPGSIREAHGPNEYVTFSQLFEGLNGYKRMVMYNLR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/593 Sequence name : 593 Sequence length : 400 VALUES OF COMPUTED PARAMETERS Coef20 : 4.468 CoefTot : -1.145 ChDiff : -17 ZoneTo : 41 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.718 1.629 0.152 0.719 MesoH : 0.162 0.508 -0.285 0.360 MuHd_075 : 12.475 17.758 3.824 4.180 MuHd_095 : 13.034 12.325 3.994 4.031 MuHd_100 : 11.696 9.887 2.476 2.600 MuHd_105 : 10.145 13.036 3.621 2.422 Hmax_075 : 14.500 17.413 1.656 6.064 Hmax_095 : 14.300 18.200 3.271 6.309 Hmax_100 : 13.900 14.200 1.497 6.120 Hmax_105 : 15.200 19.200 1.560 6.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6740 0.3260 DFMC : 0.6869 0.3131
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 400 SPCC757.05c MTMKISVWSLLIVIGYHLWMSPVLAGPLNFGYLSWGQHSILEQDSVQLISHQSLLPAGDNLISLHKSLVEIESLGGNEVN 80 VSDFLKSYLESKGLTVELQRVSSNPTVRDNVYAYLGSQRNTKVVLTSHIDTVNPFLPYYIEGDKIHGRGSCDAKSSVAAQ 160 IFAMLELMSEGKVQEGDLSLLFVVGEEIDGIGMKTVANKLNADWEVAIFGEPTENKLGVGHKGNFRFDVYAHGKACHSGY 240 PQEGFSAIEFLLRQCVKLMDTDLPKSKLLGPSTINIGTIEGGAAANILAAEAKAEVFIRVAEDIETIRDIAEDLFDTEHS 320 EIKVIQYSPPQYLDYDIPGMDTVVLAYATDIPYLSDRKMKIYLFGPGSIREAHGPNEYVTFSQLFEGLNGYKRMVMYNLR 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPCC757.05c 4 ---MTMK|IS 0.063 . SPCC757.05c 66 NLISLHK|SL 0.078 . SPCC757.05c 86 NVSDFLK|SY 0.082 . SPCC757.05c 92 KSYLESK|GL 0.071 . SPCC757.05c 100 LTVELQR|VS 0.066 . SPCC757.05c 108 SSNPTVR|DN 0.120 . SPCC757.05c 119 AYLGSQR|NT 0.091 . SPCC757.05c 122 GSQRNTK|VV 0.175 . SPCC757.05c 144 YYIEGDK|IH 0.057 . SPCC757.05c 148 GDKIHGR|GS 0.139 . SPCC757.05c 154 RGSCDAK|SS 0.110 . SPCC757.05c 172 ELMSEGK|VQ 0.061 . SPCC757.05c 194 IDGIGMK|TV 0.078 . SPCC757.05c 199 MKTVANK|LN 0.070 . SPCC757.05c 216 GEPTENK|LG 0.056 . SPCC757.05c 222 KLGVGHK|GN 0.068 . SPCC757.05c 226 GHKGNFR|FD 0.079 . SPCC757.05c 234 DVYAHGK|AC 0.074 . SPCC757.05c 253 AIEFLLR|QC 0.081 . SPCC757.05c 257 LLRQCVK|LM 0.070 . SPCC757.05c 265 MDTDLPK|SK 0.073 . SPCC757.05c 267 TDLPKSK|LL 0.074 . SPCC757.05c 293 ILAAEAK|AE 0.069 . SPCC757.05c 299 KAEVFIR|VA 0.188 . SPCC757.05c 308 EDIETIR|DI 0.099 . SPCC757.05c 323 TEHSEIK|VI 0.073 . SPCC757.05c 357 IPYLSDR|KM 0.100 . SPCC757.05c 358 PYLSDRK|MK 0.061 . SPCC757.05c 360 LSDRKMK|IY 0.180 . SPCC757.05c 370 FGPGSIR|EA 0.083 . SPCC757.05c 392 EGLNGYK|RM 0.051 . SPCC757.05c 393 GLNGYKR|MV 0.352 . SPCC757.05c 400 MVMYNLR|-- 0.083 . ____________________________^_________________

  • Fasta :-

    >SPCC757.05c AGCGTCTTAAGCACTGGTATCTGCACTTAGTACTAATTTCAGCGTTTATATTTTAATACA ACCATAAAACAATCCTTCTTTATATTAGTTATCCTAATCAAATTGTTACCGCCTACCAAG GGTTGTCGCTTAAAATTTGGAAGTTAGATAATAGATAGGCTACTACTACACCATAAAATC ATGAACACTCCCATTACTGCTCGAGTTCAATAACCGTCTGCCTATTGTACATAAATTCAA AAATAACGTTTATTGTATGACAATGAAAATTTCTGTTTGGAGCCTTTTAATAGTTATCGG CTACCACCTTTGGATGTCACCCGTACTGGCGGGTCCCCTAAATTTTGGTTATTTGTCTTG GGGGCAACACTCCATACTTGAACAAGACTCTGTACAGCTTATTTCACATCAATCATTATT GCCAGCTGGCGACAACTTGATTTCTCTTCATAAATCTTTGGTTGAAATAGAATCTCTTGG TGGGAATGAAGTAAATGTGTCAGATTTCTTAAAATCCTACTTGGAGTCCAAGGGTTTAAC CGTCGAATTGCAGCGTGTCTCCTCTAACCCGACTGTGCGAGACAACGTCTATGCATATCT AGGTAGTCAGAGAAACACCAAGGTTGTACTGACAAGCCATATCGACACTGTCAACCCTTT CTTACCCTACTACATTGAAGGCGATAAAATTCATGGTAGAGGTTCCTGTGACGCAAAAAG TTCAGTTGCTGCACAAATCTTTGCAATGTTGGAACTAATGTCAGAAGGAAAAGTTCAAGA AGGTGATCTTTCGCTGCTGTTTGTCGTAGGCGAAGAAATTGATGGTATCGGGATGAAAAC CGTTGCTAATAAACTTAATGCTGATTGGGAGGTAGCTATATTTGGAGAGCCCACTGAAAA CAAGTTGGGTGTAGGACACAAGGGTAACTTTAGGTTTGACGTTTATGCTCACGGCAAAGC TTGTCATTCTGGATATCCCCAAGAAGGATTTAGTGCCATTGAGTTTTTACTTCGACAATG TGTAAAGTTAATGGACACTGACTTACCAAAGTCTAAGTTGCTGGGGCCTAGCACTATTAA CATTGGTACTATAGAAGGTGGCGCTGCCGCGAATATTCTTGCAGCTGAAGCAAAGGCTGA GGTATTTATTAGAGTTGCAGAAGATATAGAAACAATCCGTGATATAGCCGAGGATTTGTT CGACACCGAGCATTCTGAGATAAAAGTCATCCAATATTCACCTCCTCAATACCTCGATTA TGATATACCCGGAATGGATACGGTTGTTTTAGCCTATGCTACTGATATACCATATTTAAG TGACAGGAAAATGAAGATATATTTATTTGGACCTGGTTCCATCCGCGAAGCTCATGGCCC AAACGAGTATGTTACATTTTCTCAACTCTTTGAGGGTCTGAATGGTTACAAACGCATGGT TATGTATAATTTACGTTAATGTGTTTCAATTACATAACATCATTCTTTGTATGTGTACAA TACCTTGGTGATGCCCGATGTACTATATTGACCTCTAATCATATTAATTATTTTCATAGA TATCAAAATTAATCATCAGCTCATTAAGTTAGTCTTTTACTTTAAAAATTGATACATGAT TATTAATTGTGTGTCACTGAATTGCCGAATCCGTAACAAACATATAGCGGCAATATCGTT TAGCCCATCTCTCCATGTGGAAATAAAATAGGATTAAATAATGCAGCAGCATGCATCGTC CAAAACTGTATAAAATTTAAGTAATCTGTCC
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  • Fasta :-

    MTMKISVWSLLIVIGYHLWMSPVLAGPLNFGYLSWGQHSILEQDSVQLISHQSLLPAGDN LISLHKSLVEIESLGGNEVNVSDFLKSYLESKGLTVELQRVSSNPTVRDNVYAYLGSQRN TKVVLTSHIDTVNPFLPYYIEGDKIHGRGSCDAKSSVAAQIFAMLELMSEGKVQEGDLSL LFVVGEEIDGIGMKTVANKLNADWEVAIFGEPTENKLGVGHKGNFRFDVYAHGKACHSGY PQEGFSAIEFLLRQCVKLMDTDLPKSKLLGPSTINIGTIEGGAAANILAAEAKAEVFIRV AEDIETIRDIAEDLFDTEHSEIKVIQYSPPQYLDYDIPGMDTVVLAYATDIPYLSDRKMK IYLFGPGSIREAHGPNEYVTFSQLFEGLNGYKRMVMYNLR

    No Results
  • title: metal binding site
  • coordinates: H128,D152,E186,E187,E211,H373
No Results
No Results
IDSitePeptideScoreMethod
SPCC757.05c127 SVVLTSHIDT0.996unsp

SPCC757.05c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India