TA03720 | cysteine proteinase precursor, tacP, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA03720OTHER0.9999900.0000080.000002
No Results

  • Fasta :-

    >TA03720 MAETSFIDPSQRLIDNRFDDVEMSRQFEEDSTLFGSFRRLMTKRRVAIICSIVFSLLVVI GVTVTAVLVTRSKDVFSFKNSLENHAKSDFKSIDLKLIKSYVNELTDLYKDRYISGNHVL EFEVMLSFDKFNKDYNRVHASHNERRDRFLTFRNKFLKVKNHEGHETYSREINSFADMTD EEFNKLFPPIKVPTQRSSPSHVSRLMARMVSDKKYLANLALAKSFVEPINDPTNVTGEGL DWRKANGVTKVKDQGLCGSCWAFATIGSVESLYKIYRDVTLDLSEQELVDCETKSKGCEG GFGDTALQYIQNKGISHSSDMPYHAQNQKCVVKSTDKVFISNSTVTEGLDILNKSLVISP TIVYIAASNDLTMYKSGIYNGECGQGLNHAVLLVGEGYDEVLNKRYWIIKNSWGPHWGEE GYMRLERTNVGTDMCGVLTTGISPVL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA03720.fa Sequence name : TA03720 Sequence length : 446 VALUES OF COMPUTED PARAMETERS Coef20 : 3.732 CoefTot : 0.141 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.382 3.041 0.656 0.914 MesoH : -0.483 0.569 -0.341 0.238 MuHd_075 : 31.653 8.401 7.147 4.868 MuHd_095 : 27.577 19.626 7.218 6.623 MuHd_100 : 16.363 14.289 4.887 4.458 MuHd_105 : 12.073 10.816 3.723 2.878 Hmax_075 : 13.067 9.333 1.596 4.188 Hmax_095 : 3.063 7.700 -0.528 3.544 Hmax_100 : -0.600 6.800 -2.089 2.180 Hmax_105 : 1.200 6.800 -1.695 2.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9729 0.0271 DFMC : 0.9864 0.0136
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 446 TA03720 MAETSFIDPSQRLIDNRFDDVEMSRQFEEDSTLFGSFRRLMTKRRVAIICSIVFSLLVVIGVTVTAVLVTRSKDVFSFKN 80 SLENHAKSDFKSIDLKLIKSYVNELTDLYKDRYISGNHVLEFEVMLSFDKFNKDYNRVHASHNERRDRFLTFRNKFLKVK 160 NHEGHETYSREINSFADMTDEEFNKLFPPIKVPTQRSSPSHVSRLMARMVSDKKYLANLALAKSFVEPINDPTNVTGEGL 240 DWRKANGVTKVKDQGLCGSCWAFATIGSVESLYKIYRDVTLDLSEQELVDCETKSKGCEGGFGDTALQYIQNKGISHSSD 320 MPYHAQNQKCVVKSTDKVFISNSTVTEGLDILNKSLVISPTIVYIAASNDLTMYKSGIYNGECGQGLNHAVLLVGEGYDE 400 VLNKRYWIIKNSWGPHWGEEGYMRLERTNVGTDMCGVLTTGISPVL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA03720 12 FIDPSQR|LI 0.094 . TA03720 17 QRLIDNR|FD 0.107 . TA03720 25 DDVEMSR|QF 0.077 . TA03720 38 TLFGSFR|RL 0.110 . TA03720 39 LFGSFRR|LM 0.116 . TA03720 43 FRRLMTK|RR 0.065 . TA03720 44 RRLMTKR|RV 0.263 . TA03720 45 RLMTKRR|VA 0.160 . TA03720 71 TAVLVTR|SK 0.108 . TA03720 73 VLVTRSK|DV 0.077 . TA03720 79 KDVFSFK|NS 0.060 . TA03720 87 SLENHAK|SD 0.106 . TA03720 91 HAKSDFK|SI 0.090 . TA03720 96 FKSIDLK|LI 0.069 . TA03720 99 IDLKLIK|SY 0.074 . TA03720 110 ELTDLYK|DR 0.071 . TA03720 112 TDLYKDR|YI 0.148 . TA03720 130 VMLSFDK|FN 0.060 . TA03720 133 SFDKFNK|DY 0.078 . TA03720 137 FNKDYNR|VH 0.067 . TA03720 145 HASHNER|RD 0.078 . TA03720 146 ASHNERR|DR 0.175 . TA03720 148 HNERRDR|FL 0.255 . TA03720 153 DRFLTFR|NK 0.085 . TA03720 155 FLTFRNK|FL 0.065 . TA03720 158 FRNKFLK|VK 0.078 . TA03720 160 NKFLKVK|NH 0.072 . TA03720 170 GHETYSR|EI 0.090 . TA03720 185 TDEEFNK|LF 0.060 . TA03720 191 KLFPPIK|VP 0.056 . TA03720 196 IKVPTQR|SS 0.122 . TA03720 204 SPSHVSR|LM 0.124 . TA03720 208 VSRLMAR|MV 0.187 . TA03720 213 ARMVSDK|KY 0.072 . TA03720 214 RMVSDKK|YL 0.079 . TA03720 223 ANLALAK|SF 0.070 . TA03720 243 GEGLDWR|KA 0.104 . TA03720 244 EGLDWRK|AN 0.074 . TA03720 250 KANGVTK|VK 0.090 . TA03720 252 NGVTKVK|DQ 0.073 . TA03720 274 SVESLYK|IY 0.064 . TA03720 277 SLYKIYR|DV 0.152 . TA03720 294 LVDCETK|SK 0.079 . TA03720 296 DCETKSK|GC 0.076 . TA03720 313 LQYIQNK|GI 0.085 . TA03720 329 YHAQNQK|CV 0.078 . TA03720 333 NQKCVVK|ST 0.116 . TA03720 337 VVKSTDK|VF 0.053 . TA03720 354 GLDILNK|SL 0.073 . TA03720 375 NDLTMYK|SG 0.072 . TA03720 404 YDEVLNK|RY 0.068 . TA03720 405 DEVLNKR|YW 0.163 . TA03720 410 KRYWIIK|NS 0.065 . TA03720 424 GEEGYMR|LE 0.087 . TA03720 427 GYMRLER|TN 0.197 . ____________________________^_________________

  • Fasta :-

    >TA03720 ATGGCTGAGACTTCTTTTATTGATCCCAGTCAGAGGTTGATTGACAACCGTTTCGACGAT GTTGAGATGAGTAGACAGTTTGAGGAGGATTCCACTTTGTTTGGTTCTTTTAGACGCTTG ATGACTAAGAGGCGTGTTGCTATTATATGTAGTATTGTTTTTTCTTTGCTTGTTGTGATT GGTGTTACTGTAACTGCTGTATTAGTTACTAGATCGAAGGATGTATTTAGTTTCAAGAAT AGTCTTGAAAATCATGCTAAATCTGATTTTAAATCCATAGACTTAAAGCTTATAAAATCC TATGTAAATGAGTTAACTGATTTATACAAGGATCGTTACATATCTGGCAATCATGTTCTC GAGTTTGAGGTCATGTTGAGCTTCGACAAATTCAACAAGGATTACAATAGAGTTCATGCA AGTCACAATGAACGCAGAGATAGGTTCTTGACATTCAGGAACAAGTTTTTGAAGGTTAAA AATCACGAAGGTCACGAGACTTATAGCAGGGAGATAAATTCTTTTGCTGACATGACTGAT GAGGAGTTTAACAAATTGTTTCCCCCAATCAAGGTTCCAACTCAGAGATCAAGTCCTTCT CATGTTAGTCGTCTCATGGCTAGAATGGTTTCTGACAAAAAGTATCTTGCCAATCTCGCT TTGGCCAAATCGTTCGTTGAGCCAATAAATGACCCAACTAATGTAACTGGAGAAGGTCTT GATTGGAGAAAGGCCAATGGAGTTACCAAGGTTAAGGATCAAGGTCTGTGCGGATCATGC TGGGCATTTGCCACCATCGGTTCAGTCGAGAGCCTTTACAAAATTTACAGAGATGTAACT CTTGACTTGAGTGAACAAGAACTTGTTGATTGTGAAACTAAAAGCAAGGGTTGTGAAGGA GGTTTCGGTGACACTGCTCTTCAATACATACAAAATAAAGGTATAAGCCACAGCTCTGAT ATGCCATACCACGCACAAAACCAGAAGTGCGTTGTAAAATCCACCGACAAAGTGTTCATC AGCAACTCAACTGTTACTGAGGGTTTAGATATTTTAAATAAGTCTCTAGTTATTTCCCCA ACAATAGTTTATATTGCCGCATCAAATGATCTCACCATGTACAAATCGGGCATATACAAC GGAGAGTGCGGTCAAGGACTCAACCACGCGGTGCTTCTAGTGGGTGAGGGTTACGATGAA GTCTTAAATAAAAGATACTGGATAATTAAGAACTCCTGGGGACCACACTGGGGAGAAGAA GGATACATGAGGCTTGAAAGAACCAACGTCGGCACCGATATGTGTGGAGTACTTACCACT GGTATATCTCCAGTACTATAA
  • Download Fasta

  • Fasta :-

    MAETSFIDPSQRLIDNRFDDVEMSRQFEEDSTLFGSFRRLMTKRRVAIICSIVFSLLVVI GVTVTAVLVTRSKDVFSFKNSLENHAKSDFKSIDLKLIKSYVNELTDLYKDRYISGNHVL EFEVMLSFDKFNKDYNRVHASHNERRDRFLTFRNKFLKVKNHEGHETYSREINSFADMTD EEFNKLFPPIKVPTQRSSPSHVSRLMARMVSDKKYLANLALAKSFVEPINDPTNVTGEGL DWRKANGVTKVKDQGLCGSCWAFATIGSVESLYKIYRDVTLDLSEQELVDCETKSKGCEG GFGDTALQYIQNKGISHSSDMPYHAQNQKCVVKSTDKVFISNSTVTEGLDILNKSLVISP TIVYIAASNDLTMYKSGIYNGECGQGLNHAVLLVGEGYDEVLNKRYWIIKNSWGPHWGEE GYMRLERTNVGTDMCGVLTTGISPVL

  • title: active site
  • coordinates: Q254,C260,H389,N411
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA0372042 TRRLMTKRRV0.991unspTA0372077 SKDVFSFKNS0.99unsp

TA03720      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India