TA03785 | proteasome subnit, putative

UniProt_ID: Q4UCE5

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TA03785	OTHER	0.997629	0.002306	0.000065

No Results

Fasta :-
>TA03785 MVGIGAGYDLSVSTFSPDGRVFQVEYATKAVDSAPTAIAVVFSDGIVFAADSLACGTQDD SPYANVLQAKPAWRVFAIDEQIGAVVAGLLPDAKCVIKRAQEECKSFFKEYGTKPPVRII AERIALFVHAYTLYWHVRPFGVSILLAGINNNTLNWIDVDELYCIESNGACYKYGGMAIG KGKHIAKTEIEKLNLKEKKCKESLKDICYIISQCRDESSLKTSDIQMAWICTDSNYTYQI IPQDLINLAKNQSTQN
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA03785.fa Sequence name : TA03785 Sequence length : 256 VALUES OF COMPUTED PARAMETERS Coef20 : 3.457 CoefTot : -0.766 ChDiff : -3 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.341 1.718 0.206 0.651 MesoH : -0.363 0.599 -0.255 0.292 MuHd_075 : 23.885 12.972 4.934 3.068 MuHd_095 : 8.534 4.397 2.247 1.591 MuHd_100 : 4.009 5.378 0.683 1.450 MuHd_105 : 4.151 4.135 0.930 1.055 Hmax_075 : 15.983 10.733 1.785 4.655 Hmax_095 : 13.700 10.900 1.934 4.900 Hmax_100 : 13.700 10.900 1.910 4.900 Hmax_105 : 10.383 7.900 1.610 4.118 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9808 0.0192 DFMC : 0.9767 0.0233

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 256 TA03785 MVGIGAGYDLSVSTFSPDGRVFQVEYATKAVDSAPTAIAVVFSDGIVFAADSLACGTQDDSPYANVLQAKPAWRVFAIDE 80 QIGAVVAGLLPDAKCVIKRAQEECKSFFKEYGTKPPVRIIAERIALFVHAYTLYWHVRPFGVSILLAGINNNTLNWIDVD 160 ELYCIESNGACYKYGGMAIGKGKHIAKTEIEKLNLKEKKCKESLKDICYIISQCRDESSLKTSDIQMAWICTDSNYTYQI 240 IPQDLINLAKNQSTQN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA03785 20 TFSPDGR|VF 0.100 . TA03785 29 QVEYATK|AV 0.082 . TA03785 70 ANVLQAK|PA 0.088 . TA03785 74 QAKPAWR|VF 0.084 . TA03785 94 GLLPDAK|CV 0.071 . TA03785 98 DAKCVIK|RA 0.068 . TA03785 99 AKCVIKR|AQ 0.212 . TA03785 105 RAQEECK|SF 0.107 . TA03785 109 ECKSFFK|EY 0.073 . TA03785 114 FKEYGTK|PP 0.060 . TA03785 118 GTKPPVR|II 0.104 . TA03785 123 VRIIAER|IA 0.098 . TA03785 138 TLYWHVR|PF 0.133 . TA03785 173 SNGACYK|YG 0.087 . TA03785 181 GGMAIGK|GK 0.072 . TA03785 183 MAIGKGK|HI 0.081 . TA03785 187 KGKHIAK|TE 0.068 . TA03785 192 AKTEIEK|LN 0.057 . TA03785 196 IEKLNLK|EK 0.054 . TA03785 198 KLNLKEK|KC 0.074 . TA03785 199 LNLKEKK|CK 0.106 . TA03785 201 LKEKKCK|ES 0.070 . TA03785 205 KCKESLK|DI 0.093 . TA03785 215 YIISQCR|DE 0.088 . TA03785 221 RDESSLK|TS 0.068 . TA03785 250 DLINLAK|NQ 0.069 . ____________________________^_________________

Fasta :-
>TA03785 ATGGTTGGAATTGGTGCTGGTTATGATTTATCTGTATCAACATTTTCACCAGATGGTAGA GTATTTCAAGTAGAATATGCTACAAAAGCTGTAGATTCCGCACCTACAGCTATTGCTGTA GTATTTTCTGATGGTATTGTATTTGCAGCAGATTCTTTAGCTTGTGGTACACAAGATGAT TCACCATATGCTAATGTATTACAAGCAAAACCAGCTTGGCGTGTATTTGCAATTGATGAA CAAATAGGAGCTGTAGTTGCAGGTCTATTACCTGATGCCAAATGTGTAATAAAAAGAGCA CAAGAAGAATGTAAATCATTCTTTAAAGAATATGGTACTAAACCACCAGTAAGAATCATT GCTGAACGTATAGCTTTATTTGTACACGCATATACTTTATATTGGCATGTCAGACCATTT GGTGTTTCTATATTATTAGCTGGAATTAATAATAATACACTTAATTGGATTGATGTAGAT GAATTATATTGTATTGAAAGTAATGGAGCATGTTATAAATATGGTGGAATGGCAATAGGA AAAGGAAAACATATAGCAAAAACAGAAATAGAGAAATTAAATTTAAAAGAAAAAAAGTGT AAAGAATCATTAAAAGATATTTGTTATATAATATCACAATGTAGAGATGAAAGTTCACTT AAAACTAGTGATATACAAATGGCATGGATTTGTACTGATTCTAATTATACATATCAAATC ATACCACAAGATTTAATTAATCTTGCTAAAAATCAATCTACACAAAATTAA
Download Fasta

Fasta :-

MVGIGAGYDLSVSTFSPDGRVFQVEYATKAVDSAPTAIAVVFSDGIVFAADSLACGTQDD SPYANVLQAKPAWRVFAIDEQIGAVVAGLLPDAKCVIKRAQEECKSFFKEYGTKPPVRII AERIALFVHAYTLYWHVRPFGVSILLAGINNNTLNWIDVDELYCIESNGACYKYGGMAIG KGKHIAKTEIEKLNLKEKKCKESLKDICYIISQCRDESSLKTSDIQMAWICTDSNYTYQI IPQDLINLAKNQSTQN

Proteasome subunits

title: active site
coordinates: P35,D51,L53,R74

	ID	Site	Position	Gscore	Iscore
	TA03785	T	28	0.510	0.083

	ID	Site	Position	Gscore	Iscore
	TA03785	T	28	0.510	0.083

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	TA03785	61 S	TQDDSPYAN	0.991	unsp	TA03785	203 S	KCKESLKDI	0.997	unsp

TA03785 | proteasome subnit, putative

ID's

UniProt_ID: Q4UCE5

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TA03785

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India