TA04130 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA04130OTHER0.9993670.0005090.000124
No Results

  • Fasta :-

    >TA04130 MGNRLDSLIFRPPNPPSYSRNDPHLHLIPTPDGNTIASYFVKHKYAKFTIIFSHANAEDI GNVFGNLIKRITKWNCNLFIYDYPGNSPFSNIVTFIELNLMLGYGLSGGVCSEQNMYNSA DLSYNYLINFLNVNSKNIIAYGRSLGCSCAIYLGVKYNLLGVILQSPFLSIYRIKLPCFL PFDRFNNYDKVKDLNCPALVIHGDSDDIIPVQHSIQLITRIPEVYYYFVKRGNHNNLDYC FTGVMDSCINEFIHYLLSKYLSETQDGIIFENEPEDKYYGDNLLKQMENTQMEQLLSHKV NVNFYTRGATDINGIEYPERDPARLKFSNCFKF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA04130.fa Sequence name : TA04130 Sequence length : 333 VALUES OF COMPUTED PARAMETERS Coef20 : 3.650 CoefTot : -1.074 ChDiff : -3 ZoneTo : 21 KR : 3 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.071 1.488 0.296 0.594 MesoH : -0.013 0.580 -0.179 0.306 MuHd_075 : 23.958 13.503 6.093 4.715 MuHd_095 : 29.835 19.186 7.629 7.258 MuHd_100 : 28.625 17.713 7.615 7.355 MuHd_105 : 27.071 15.858 7.589 6.871 Hmax_075 : 3.383 0.700 -1.053 1.447 Hmax_095 : 10.588 7.350 0.771 3.868 Hmax_100 : 12.700 10.400 1.611 4.960 Hmax_105 : 10.383 9.450 1.395 4.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6957 0.3043 DFMC : 0.8779 0.1221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 333 TA04130 MGNRLDSLIFRPPNPPSYSRNDPHLHLIPTPDGNTIASYFVKHKYAKFTIIFSHANAEDIGNVFGNLIKRITKWNCNLFI 80 YDYPGNSPFSNIVTFIELNLMLGYGLSGGVCSEQNMYNSADLSYNYLINFLNVNSKNIIAYGRSLGCSCAIYLGVKYNLL 160 GVILQSPFLSIYRIKLPCFLPFDRFNNYDKVKDLNCPALVIHGDSDDIIPVQHSIQLITRIPEVYYYFVKRGNHNNLDYC 240 FTGVMDSCINEFIHYLLSKYLSETQDGIIFENEPEDKYYGDNLLKQMENTQMEQLLSHKVNVNFYTRGATDINGIEYPER 320 DPARLKFSNCFKF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA04130 4 ---MGNR|LD 0.074 . TA04130 11 LDSLIFR|PP 0.078 . TA04130 20 NPPSYSR|ND 0.068 . TA04130 42 IASYFVK|HK 0.090 . TA04130 44 SYFVKHK|YA 0.072 . TA04130 47 VKHKYAK|FT 0.084 . TA04130 69 VFGNLIK|RI 0.059 . TA04130 70 FGNLIKR|IT 0.148 . TA04130 73 LIKRITK|WN 0.101 . TA04130 136 FLNVNSK|NI 0.078 . TA04130 143 NIIAYGR|SL 0.147 . TA04130 156 AIYLGVK|YN 0.056 . TA04130 173 PFLSIYR|IK 0.064 . TA04130 175 LSIYRIK|LP 0.060 . TA04130 184 CFLPFDR|FN 0.069 . TA04130 190 RFNNYDK|VK 0.060 . TA04130 192 NNYDKVK|DL 0.070 . TA04130 220 SIQLITR|IP 0.081 . TA04130 230 VYYYFVK|RG 0.057 . TA04130 231 YYYFVKR|GN 0.231 . TA04130 259 IHYLLSK|YL 0.088 . TA04130 277 ENEPEDK|YY 0.077 . TA04130 285 YGDNLLK|QM 0.060 . TA04130 299 EQLLSHK|VN 0.053 . TA04130 307 NVNFYTR|GA 0.129 . TA04130 320 GIEYPER|DP 0.087 . TA04130 324 PERDPAR|LK 0.090 . TA04130 326 RDPARLK|FS 0.060 . TA04130 332 KFSNCFK|F- 0.079 . ____________________________^_________________

  • Fasta :-

    >TA04130 ATGGGAAATAGATTAGATTCTTTGATTTTCAGGCCTCCCAATCCCCCGTCTTATAGCCGC AATGACCCTCATCTCCATCTAATACCAACTCCCGACGGAAATACCATCGCATCCTACTTC GTCAAACACAAGTATGCGAAGTTTACGATAATTTTCAGCCACGCTAATGCTGAGGATATT GGCAATGTTTTTGGAAACCTTATCAAAAGAATCACCAAGTGGAACTGTAATCTTTTCATT TACGATTATCCAGGTAATTCACCGTTTTCTAATATTGTTACTTTTATTGAACTAAATTTG ATGTTAGGTTATGGCCTAAGTGGTGGCGTTTGCAGTGAGCAGAACATGTACAACTCAGCA GATTTGTCCTACAATTACCTAATAAATTTTCTGAATGTGAATAGTAAGAACATAATAGCG TACGGTCGTAGTTTGGGTTGTTCTTGTGCTATATATTTGGGCGTAAAATATAACTTATTA GGCGTGATTTTACAAAGCCCATTTTTGAGCATTTATCGCATTAAACTTCCCTGCTTCTTA CCCTTTGACCGCTTTAACAATTATGACAAGGTGAAGGACCTCAACTGTCCTGCACTTGTT ATTCACGGTGACAGCGATGATATTATCCCAGTTCAGCACTCGATTCAGCTTATCACTAGA ATTCCAGAAGTTTATTACTATTTCGTGAAGAGGGGGAATCACAACAATTTAGACTACTGC TTCACTGGCGTTATGGACTCCTGCATTAATGAGTTCATCCACTATCTTTTGAGCAAGTAT TTGTCCGAGACTCAGGACGGGATCATCTTCGAGAATGAGCCTGAAGACAAGTATTACGGC GATAATCTCCTAAAGCAGATGGAAAACACCCAGATGGAACAGCTCTTATCACATAAAGTT AACGTGAACTTTTACACTCGAGGTGCCACCGACATCAATGGAATTGAGTACCCTGAACGT GACCCTGCTAGACTTAAATTCAGCAATTGCTTCAAATTTTAA
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  • Fasta :-

    MGNRLDSLIFRPPNPPSYSRNDPHLHLIPTPDGNTIASYFVKHKYAKFTIIFSHANAEDI GNVFGNLIKRITKWNCNLFIYDYPGNSPFSNIVTFIELNLMLGYGLSGGVCSEQNMYNSA DLSYNYLINFLNVNSKNIIAYGRSLGCSCAIYLGVKYNLLGVILQSPFLSIYRIKLPCFL PFDRFNNYDKVKDLNCPALVIHGDSDDIIPVQHSIQLITRIPEVYYYFVKRGNHNNLDYC FTGVMDSCINEFIHYLLSKYLSETQDGIIFENEPEDKYYGDNLLKQMENTQMEQLLSHKV NVNFYTRGATDINGIEYPERDPARLKFSNCFKF

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TA04130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India