TA04310 | 4-methyl-5(b-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA04310OTHER0.9257460.0295730.044682
No Results

  • Fasta :-

    >TA04310 MKLIILIRSSMSAKMDHRVFCVGLSWSFINSLGNSLIVIWKGDGTEDIELITLVDVLRRA GVSVVLASVGDSVNLVLAHGTKLTADDKVVNLTQKTFDLIAVPGGLVGATNCANNVTLIR MLKEQKSNGRLYAAICASPALVFGDCGLLDDKTSAVAFPGFENKLPLVGTGRVHVSNNCG IFRYVTSQGPGTALEFALKLVELLCGVEAKNKLTKSMLLHPSININSLYDLLICMSSNNN RLKMAIKVTEKGTK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA04310.fa Sequence name : TA04310 Sequence length : 254 VALUES OF COMPUTED PARAMETERS Coef20 : 4.756 CoefTot : -0.029 ChDiff : 7 ZoneTo : 42 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.271 1.788 0.360 0.592 MesoH : -0.185 0.830 -0.203 0.318 MuHd_075 : 32.283 18.925 7.484 7.597 MuHd_095 : 26.044 22.789 8.281 6.206 MuHd_100 : 26.410 20.968 8.839 6.378 MuHd_105 : 24.549 19.554 8.012 6.604 Hmax_075 : 9.200 22.633 1.796 4.370 Hmax_095 : 18.200 20.300 2.839 6.939 Hmax_100 : 18.000 17.800 3.377 6.830 Hmax_105 : 16.600 14.500 2.354 7.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5443 0.4557 DFMC : 0.5770 0.4230
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 254 TA04310 MKLIILIRSSMSAKMDHRVFCVGLSWSFINSLGNSLIVIWKGDGTEDIELITLVDVLRRAGVSVVLASVGDSVNLVLAHG 80 TKLTADDKVVNLTQKTFDLIAVPGGLVGATNCANNVTLIRMLKEQKSNGRLYAAICASPALVFGDCGLLDDKTSAVAFPG 160 FENKLPLVGTGRVHVSNNCGIFRYVTSQGPGTALEFALKLVELLCGVEAKNKLTKSMLLHPSININSLYDLLICMSSNNN 240 RLKMAIKVTEKGTK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA04310 2 -----MK|LI 0.068 . TA04310 8 KLIILIR|SS 0.128 . TA04310 14 RSSMSAK|MD 0.103 . TA04310 18 SAKMDHR|VF 0.103 . TA04310 41 SLIVIWK|GD 0.076 . TA04310 58 TLVDVLR|RA 0.104 . TA04310 59 LVDVLRR|AG 0.097 . TA04310 82 VLAHGTK|LT 0.061 . TA04310 88 KLTADDK|VV 0.066 . TA04310 95 VVNLTQK|TF 0.060 . TA04310 120 NNVTLIR|ML 0.087 . TA04310 123 TLIRMLK|EQ 0.099 . TA04310 126 RMLKEQK|SN 0.080 . TA04310 130 EQKSNGR|LY 0.082 . TA04310 152 CGLLDDK|TS 0.057 . TA04310 164 FPGFENK|LP 0.059 . TA04310 172 PLVGTGR|VH 0.067 . TA04310 183 NNCGIFR|YV 0.181 . TA04310 199 ALEFALK|LV 0.064 . TA04310 210 LCGVEAK|NK 0.065 . TA04310 212 GVEAKNK|LT 0.064 . TA04310 215 AKNKLTK|SM 0.075 . TA04310 241 MSSNNNR|LK 0.122 . TA04310 243 SNNNRLK|MA 0.094 . TA04310 247 RLKMAIK|VT 0.077 . TA04310 251 AIKVTEK|GT 0.065 . TA04310 254 VTEKGTK|-- 0.064 . ____________________________^_________________

  • Fasta :-

    >TA04310 ATGAAGTTGATAATATTGATTAGATCAAGTATGAGTGCAAAAATGGATCATAGAGTATTT TGTGTAGGATTATCATGGTCATTTATAAATAGTTTGGGTAATTCATTAATAGTAATATGG AAAGGAGATGGTACAGAAGATATTGAATTAATAACATTAGTTGATGTATTAAGAAGAGCC GGAGTTTCAGTAGTATTAGCATCAGTTGGTGATTCTGTTAATTTAGTACTTGCACATGGT ACTAAATTAACAGCAGATGATAAAGTTGTTAATCTAACACAAAAAACTTTTGATCTTATT GCTGTACCTGGTGGTCTTGTTGGTGCTACAAATTGTGCAAATAATGTAACATTAATACGT ATGTTAAAAGAACAAAAGAGTAATGGTAGATTATATGCAGCGATTTGTGCTAGTCCAGCA TTAGTATTTGGTGATTGTGGATTACTCGATGATAAAACTTCTGCTGTAGCTTTTCCTGGA TTTGAAAATAAATTACCACTTGTTGGTACTGGACGTGTACATGTTTCTAATAATTGTGGT ATCTTCCGTTACGTAACATCACAAGGACCAGGAACAGCATTAGAATTTGCATTGAAGTTG GTAGAATTATTATGTGGAGTTGAAGCTAAAAATAAATTAACCAAATCAATGCTATTACAT CCATCCATCAATATTAATTCATTATATGATTTGTTGATATGTATGAGTAGTAATAATAAT CGACTGAAGATGGCCATTAAAGTGACTGAAAAGGGTACAAAGTAA
  • Download Fasta

  • Fasta :-

    MKLIILIRSSMSAKMDHRVFCVGLSWSFINSLGNSLIVIWKGDGTEDIELITLVDVLRRA GVSVVLASVGDSVNLVLAHGTKLTADDKVVNLTQKTFDLIAVPGGLVGATNCANNVTLIR MLKEQKSNGRLYAAICASPALVFGDCGLLDDKTSAVAFPGFENKLPLVGTGRVHVSNNCG IFRYVTSQGPGTALEFALKLVELLCGVEAKNKLTKSMLLHPSININSLYDLLICMSSNNN RLKMAIKVTEKGTK

  • title: conserved cys residue
  • coordinates: C136
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA0431012 SRSSMSAKMD0.995unspTA0431068 SVVLASVGDS0.994unsp

TA04310      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India