TA04475 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA04475OTHER0.9996010.0002660.000133
No Results

  • Fasta :-

    >TA04475 MKVECETDTSNLTPPSKIKKSYNNGIAEQKLKKNGIDDDVVPKLSYKFKDKNIKLTLDRL SATGYKGWSSVFCTHCACSGKWYYEVKINQDYKNLKFVGHDNSFKHHIKGHVRVGYACRY QRYDTPVGINSYGFSISDIDGQAYYNSKKFPYAISFSNFLDYLNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA04475.fa Sequence name : TA04475 Sequence length : 165 VALUES OF COMPUTED PARAMETERS Coef20 : 3.431 CoefTot : -0.113 ChDiff : 9 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.618 0.347 0.034 0.308 MesoH : -1.376 -0.474 -0.623 0.018 MuHd_075 : 15.444 7.389 6.200 2.708 MuHd_095 : 5.386 3.937 2.420 2.552 MuHd_100 : 6.038 5.411 2.865 2.823 MuHd_105 : 5.234 6.058 2.980 1.853 Hmax_075 : 7.933 3.700 0.978 1.132 Hmax_095 : 2.300 0.500 -1.400 1.730 Hmax_100 : 2.400 2.100 -0.391 1.170 Hmax_105 : -2.800 -0.817 -1.423 -0.166 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9411 0.0589 DFMC : 0.8640 0.1360
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 165 TA04475 MKVECETDTSNLTPPSKIKKSYNNGIAEQKLKKNGIDDDVVPKLSYKFKDKNIKLTLDRLSATGYKGWSSVFCTHCACSG 80 KWYYEVKINQDYKNLKFVGHDNSFKHHIKGHVRVGYACRYQRYDTPVGINSYGFSISDIDGQAYYNSKKFPYAISFSNFL 160 DYLNL 240 ................................................................................ 80 ................................................................................ 160 ..... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA04475 2 -----MK|VE 0.058 . TA04475 17 NLTPPSK|IK 0.059 . TA04475 19 TPPSKIK|KS 0.069 . TA04475 20 PPSKIKK|SY 0.266 . TA04475 30 NGIAEQK|LK 0.061 . TA04475 32 IAEQKLK|KN 0.071 . TA04475 33 AEQKLKK|NG 0.082 . TA04475 43 DDDVVPK|LS 0.059 . TA04475 47 VPKLSYK|FK 0.081 . TA04475 49 KLSYKFK|DK 0.115 . TA04475 51 SYKFKDK|NI 0.066 . TA04475 54 FKDKNIK|LT 0.063 . TA04475 59 IKLTLDR|LS 0.093 . TA04475 66 LSATGYK|GW 0.082 . TA04475 81 HCACSGK|WY 0.073 . TA04475 87 KWYYEVK|IN 0.067 . TA04475 93 KINQDYK|NL 0.073 . TA04475 96 QDYKNLK|FV 0.091 . TA04475 105 GHDNSFK|HH 0.067 . TA04475 109 SFKHHIK|GH 0.070 . TA04475 113 HIKGHVR|VG 0.085 . TA04475 119 RVGYACR|YQ 0.087 . TA04475 122 YACRYQR|YD 0.288 . TA04475 148 QAYYNSK|KF 0.060 . TA04475 149 AYYNSKK|FP 0.101 . ____________________________^_________________

  • Fasta :-

    >TA04475 ATGAAAGTCGAATGCGAAACTGATACTTCTAATTTAACGCCGCCTTCCAAGATAAAAAAA AGTTACAATAATGGGATTGCCGAACAAAAACTTAAAAAAAATGGAATCGATGACGATGTT GTCCCTAAACTATCTTATAAATTCAAAGATAAAAATATTAAATTAACTCTCGATCGGCTT TCCGCTACTGGTTACAAAGGCTGGTCTTCTGTCTTTTGTACACATTGTGCTTGTTCTGGG AAATGGTATTACGAAGTTAAAATAAATCAAGATTATAAAAATCTTAAATTTGTCGGTCAC GATAATTCCTTTAAACATCACATTAAAGGACATGTTAGAGTGGGATATGCCTGTAGATAT CAGAGATACGACACACCAGTTGGAATCAACAGTTATGGATTTTCAATTTCTGACATTGAT GGGCAGGCTTATTACAATTCAAAAAAGTTCCCCTACGCCATCTCATTCAGTAACTTTTTA GACTATTTAAACTTATAA
  • Download Fasta

  • Fasta :-

    MKVECETDTSNLTPPSKIKKSYNNGIAEQKLKKNGIDDDVVPKLSYKFKDKNIKLTLDRL SATGYKGWSSVFCTHCACSGKWYYEVKINQDYKNLKFVGHDNSFKHHIKGHVRVGYACRY QRYDTPVGINSYGFSISDIDGQAYYNSKKFPYAISFSNFLDYLNL

    No Results
IDSitePositionGscoreIscore
TA04475T70.5520.060
IDSitePositionGscoreIscore
TA04475T70.5520.060
IDSitePeptideScoreMethod
TA0447561 SLDRLSATGY0.993unsp

TA04475      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India