TA04595 | proteasome subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA04595OTHER0.9973590.0002930.002348
No Results

  • Fasta :-

    >TA04595 MAGYVTGASIIAMKYNDGVLMMTDTKWSLGRMARYMNVKRLEGVSSNTLFATSGDAADHQ YLTRILKHAVHTDLLEHNNDPSEALLNAEMLLNYTSRFLYHRRTKLDPVLVSAVVGGFAN GKSFLGYTDYYGTKYTDDFVVTGLGKYFAIGPLREEHRNDFTLSEAKELALKCMRVLYLR DCQASLRVQVGYVNKDGVFIEEPFLLDTKWDFKKFAAPTSALPIAGNQF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA04595.fa Sequence name : TA04595 Sequence length : 229 VALUES OF COMPUTED PARAMETERS Coef20 : 3.678 CoefTot : -0.526 ChDiff : 1 ZoneTo : 16 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.012 1.376 0.046 0.532 MesoH : -0.806 0.078 -0.439 0.159 MuHd_075 : 7.041 8.013 1.776 1.771 MuHd_095 : 7.657 3.587 2.334 1.660 MuHd_100 : 13.639 7.605 3.100 2.523 MuHd_105 : 15.751 9.427 3.824 2.858 Hmax_075 : 14.817 15.283 2.718 5.542 Hmax_095 : 6.900 8.137 1.053 4.120 Hmax_100 : 10.900 11.600 1.590 4.900 Hmax_105 : 10.700 9.400 1.153 3.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9881 0.0119 DFMC : 0.9789 0.0211
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 229 TA04595 MAGYVTGASIIAMKYNDGVLMMTDTKWSLGRMARYMNVKRLEGVSSNTLFATSGDAADHQYLTRILKHAVHTDLLEHNND 80 PSEALLNAEMLLNYTSRFLYHRRTKLDPVLVSAVVGGFANGKSFLGYTDYYGTKYTDDFVVTGLGKYFAIGPLREEHRND 160 FTLSEAKELALKCMRVLYLRDCQASLRVQVGYVNKDGVFIEEPFLLDTKWDFKKFAAPTSALPIAGNQF 240 ................................................................................ 80 ................................................................................ 160 ..................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA04595 14 ASIIAMK|YN 0.101 . TA04595 26 LMMTDTK|WS 0.055 . TA04595 31 TKWSLGR|MA 0.106 . TA04595 34 SLGRMAR|YM 0.357 . TA04595 39 ARYMNVK|RL 0.071 . TA04595 40 RYMNVKR|LE 0.173 . TA04595 64 DHQYLTR|IL 0.101 . TA04595 67 YLTRILK|HA 0.100 . TA04595 97 LLNYTSR|FL 0.121 . TA04595 102 SRFLYHR|RT 0.075 . TA04595 103 RFLYHRR|TK 0.099 . TA04595 105 LYHRRTK|LD 0.100 . TA04595 122 GGFANGK|SF 0.074 . TA04595 134 TDYYGTK|YT 0.081 . TA04595 146 VVTGLGK|YF 0.060 . TA04595 154 FAIGPLR|EE 0.077 . TA04595 158 PLREEHR|ND 0.081 . TA04595 167 FTLSEAK|EL 0.054 . TA04595 172 AKELALK|CM 0.053 . TA04595 175 LALKCMR|VL 0.068 . TA04595 180 MRVLYLR|DC 0.114 . TA04595 187 DCQASLR|VQ 0.068 . TA04595 195 QVGYVNK|DG 0.067 . TA04595 209 PFLLDTK|WD 0.057 . TA04595 213 DTKWDFK|KF 0.057 . TA04595 214 TKWDFKK|FA 0.138 . ____________________________^_________________

  • Fasta :-

    >TA04595 ATGGCAGGCTATGTCACTGGAGCCTCGATAATCGCCATGAAATACAATGATGGAGTTTTA ATGATGACCGATACCAAATGGAGTCTCGGAAGGATGGCTCGGTACATGAATGTAAAAAGG CTTGAAGGAGTCTCCTCAAACACCCTTTTCGCAACTTCAGGAGACGCTGCTGATCACCAG TACCTGACCAGAATACTCAAGCACGCAGTACACACTGACCTTTTGGAACACAACAATGAC CCCTCAGAGGCTCTTCTCAACGCCGAAATGCTCCTAAACTACACCTCCAGATTCCTATAT CACAGAAGAACAAAGCTTGATCCAGTCCTAGTTTCAGCCGTCGTAGGAGGATTCGCTAAT GGCAAATCCTTTCTTGGTTATACTGATTATTATGGAACTAAATATACTGATGACTTTGTC GTGACAGGATTGGGGAAATATTTTGCAATTGGTCCTCTGAGAGAAGAACATAGAAATGAT TTTACTTTGTCTGAAGCAAAGGAGCTCGCACTGAAGTGTATGAGAGTTTTGTACTTGAGA GACTGCCAAGCCTCACTTAGGGTCCAGGTCGGCTACGTTAACAAGGACGGAGTTTTCATA GAAGAACCATTTCTTCTCGATACTAAATGGGATTTTAAAAAATTCGCTGCTCCAACTTCT GCTTTACCAATTGCCGGAAATCAGTTTTAA
  • Download Fasta

  • Fasta :-

    MAGYVTGASIIAMKYNDGVLMMTDTKWSLGRMARYMNVKRLEGVSSNTLFATSGDAADHQ YLTRILKHAVHTDLLEHNNDPSEALLNAEMLLNYTSRFLYHRRTKLDPVLVSAVVGGFAN GKSFLGYTDYYGTKYTDDFVVTGLGKYFAIGPLREEHRNDFTLSEAKELALKCMRVLYLR DCQASLRVQVGYVNKDGVFIEEPFLLDTKWDFKKFAAPTSALPIAGNQF

  • title: active site
  • coordinates: A8,D24,K26,R40,L144,D181,A184,S185
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TA04595      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India