TA05620 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA05620OTHER0.9996860.0002250.000088
No Results

  • Fasta :-

    >TA05620 MMGGIDKRFYKGDLYMLPVIRELYWEIKLYELWIGNIKLCCNNESYIIFDSGTSFNTMPH TEFLLFKQYIKPKYCNGLENIYEEYPIIKYKLEGGIEINIEPQEYIFLHKDKCRIAYMQI DVPSSYGRAFILGTQAFMTHYYTVYQRQPPMVRYGACSNSNSTKTGSLTPQRGFLTSERG LFSYTSYLPLVVIYLQYLLVSYTASGPITGRGPEHRNAVLGWIC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA05620.fa Sequence name : TA05620 Sequence length : 224 VALUES OF COMPUTED PARAMETERS Coef20 : 3.324 CoefTot : -0.500 ChDiff : 3 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.612 0.170 0.626 MesoH : -0.169 0.050 -0.267 0.181 MuHd_075 : 18.615 10.221 6.148 4.533 MuHd_095 : 21.244 18.717 5.734 5.641 MuHd_100 : 18.619 14.375 4.906 4.518 MuHd_105 : 14.256 7.573 3.797 3.111 Hmax_075 : 13.533 12.133 1.644 5.670 Hmax_095 : 10.150 11.287 0.250 4.550 Hmax_100 : 8.800 9.100 -0.337 4.100 Hmax_105 : 16.217 10.967 1.685 5.390 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9777 0.0223 DFMC : 0.9911 0.0089
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 224 TA05620 MMGGIDKRFYKGDLYMLPVIRELYWEIKLYELWIGNIKLCCNNESYIIFDSGTSFNTMPHTEFLLFKQYIKPKYCNGLEN 80 IYEEYPIIKYKLEGGIEINIEPQEYIFLHKDKCRIAYMQIDVPSSYGRAFILGTQAFMTHYYTVYQRQPPMVRYGACSNS 160 NSTKTGSLTPQRGFLTSERGLFSYTSYLPLVVIYLQYLLVSYTASGPITGRGPEHRNAVLGWIC 240 ................................................................................ 80 ................................................................................ 160 ................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA05620 7 MMGGIDK|RF 0.061 . TA05620 8 MGGIDKR|FY 0.213 . TA05620 11 IDKRFYK|GD 0.149 . TA05620 21 YMLPVIR|EL 0.081 . TA05620 28 ELYWEIK|LY 0.063 . TA05620 38 LWIGNIK|LC 0.057 . TA05620 67 TEFLLFK|QY 0.064 . TA05620 71 LFKQYIK|PK 0.056 . TA05620 73 KQYIKPK|YC 0.086 . TA05620 89 EEYPIIK|YK 0.064 . TA05620 91 YPIIKYK|LE 0.087 . TA05620 110 EYIFLHK|DK 0.071 . TA05620 112 IFLHKDK|CR 0.066 . TA05620 114 LHKDKCR|IA 0.140 . TA05620 128 VPSSYGR|AF 0.121 . TA05620 147 YYTVYQR|QP 0.074 . TA05620 153 RQPPMVR|YG 0.075 . TA05620 164 SNSNSTK|TG 0.074 . TA05620 172 GSLTPQR|GF 0.106 . TA05620 179 GFLTSER|GL 0.084 . TA05620 211 SGPITGR|GP 0.083 . TA05620 216 GRGPEHR|NA 0.122 . ____________________________^_________________

  • Fasta :-

    >TA05620 ATGATGGGTGGTATTGATAAAAGATTTTATAAAGGAGATTTATATATGTTACCAGTAATT AGAGAATTATATTGGGAAATTAAATTATATGAATTATGGATTGGTAATATTAAATTATGT TGTAATAATGAATCTTATATTATTTTCGATTCTGGTACTTCATTTAATACTATGCCACAT ACTGAATTTTTATTATTTAAACAATATATTAAACCCAAATATTGTAATGGATTAGAAAAT ATATATGAAGAATATCCAATAATAAAATATAAATTAGAAGGTGGTATTGAAATAAATATA GAACCACAAGAATATATATTTCTTCATAAAGATAAATGTCGTATTGCTTATATGCAAATT GATGTACCATCAAGTTATGGACGTGCATTTATACTTGGTACACAAGCTTTTATGACACAT TATTATACTGTTTATCAAAGACAACCACCTATGGTACGTTACGGTGCTTGCTCCAACAGC AACAGCACCAAAACGGGTTCACTAACTCCCCAAAGGGGCTTCTTAACCTCTGAGAGGGGT CTCTTTAGTTATACTAGTTATTTACCCTTAGTAGTTATATACCTACAGTATTTATTAGTT AGTTATACAGCTTCTGGGCCTATTACTGGCCGTGGACCAGAACACCGTAACGCTGTATTA GGTTGGATTTGCTAA
  • Download Fasta

  • Fasta :-

    MMGGIDKRFYKGDLYMLPVIRELYWEIKLYELWIGNIKLCCNNESYIIFDSGTSFNTMPH TEFLLFKQYIKPKYCNGLENIYEEYPIIKYKLEGGIEINIEPQEYIFLHKDKCRIAYMQI DVPSSYGRAFILGTQAFMTHYYTVYQRQPPMVRYGACSNSNSTKTGSLTPQRGFLTSERG LFSYTSYLPLVVIYLQYLLVSYTASGPITGRGPEHRNAVLGWIC

    No Results
No Results
No Results
IDSitePeptideScoreMethod
TA05620125 SDVPSSYGRA0.994unsp

TA05620      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India