TA05950 | 26S proteasome subunit 4, putative

_IDPredictionOTHERSPmTPCS_Position
TA05950OTHER0.9999830.0000030.000014
No Results

  • Fasta :-

    >TA05950 MGNTQGTGNSPDDKKDKNDGRQSRSDQPVTFGKRKRKMLRQLAPVRIPTVTPNSKCRLRL LKLERIKDYLLLEEEYITNKSLHKPLKTKNQDDLIKLDDIRGSPMSVGTLEEIIDENHAI VTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVDPLVSVMKVEKAPLE SYDDIGGLEEQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPPGTGKTLLAKAVANE TSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAPSIIFIDEIDAIGTKRYDATSGGE KEIQRTMLELLNQLDGFDSQSDVKVIMATNKIESLDPALIRPGRIDRKIQLPNPDSKTKR KIFEIHTSKMTMSKDVDLDEFVVNKDDLSGADIKAMCTEAGLLALRERRMQITQADLMKA KEKVLFQKKGNVPDVLYC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA05950.fa Sequence name : TA05950 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 2.126 CoefTot : -1.314 ChDiff : -5 ZoneTo : 11 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.612 1.471 -0.031 0.511 MesoH : -0.699 0.412 -0.389 0.255 MuHd_075 : 16.492 8.292 4.516 2.922 MuHd_095 : 11.179 3.975 2.756 1.174 MuHd_100 : 12.926 4.143 2.098 1.494 MuHd_105 : 14.048 3.638 1.444 1.104 Hmax_075 : -9.450 -9.683 -5.931 -1.426 Hmax_095 : -12.950 -11.700 -6.392 -1.934 Hmax_100 : -7.000 -8.900 -5.305 -1.140 Hmax_105 : -7.000 -8.900 -5.305 -1.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9981 0.0019 DFMC : 0.9946 0.0054
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 TA05950 MGNTQGTGNSPDDKKDKNDGRQSRSDQPVTFGKRKRKMLRQLAPVRIPTVTPNSKCRLRLLKLERIKDYLLLEEEYITNK 80 SLHKPLKTKNQDDLIKLDDIRGSPMSVGTLEEIIDENHAIVTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGI 160 LLDDVDPLVSVMKVEKAPLESYDDIGGLEEQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPPGTGKTLLAKAVANE 240 TSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAPSIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGFDSQ 320 SDVKVIMATNKIESLDPALIRPGRIDRKIQLPNPDSKTKRKIFEIHTSKMTMSKDVDLDEFVVNKDDLSGADIKAMCTEA 400 GLLALRERRMQITQADLMKAKEKVLFQKKGNVPDVLYC 480 .......................P........................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TA05950 14 GNSPDDK|KD 0.068 . TA05950 15 NSPDDKK|DK 0.147 . TA05950 17 PDDKKDK|ND 0.071 . TA05950 21 KDKNDGR|QS 0.092 . TA05950 24 NDGRQSR|SD 0.529 *ProP* TA05950 33 QPVTFGK|RK 0.074 . TA05950 34 PVTFGKR|KR 0.088 . TA05950 35 VTFGKRK|RK 0.069 . TA05950 36 TFGKRKR|KM 0.207 . TA05950 37 FGKRKRK|ML 0.321 . TA05950 40 RKRKMLR|QL 0.118 . TA05950 46 RQLAPVR|IP 0.075 . TA05950 55 TVTPNSK|CR 0.056 . TA05950 57 TPNSKCR|LR 0.097 . TA05950 59 NSKCRLR|LL 0.073 . TA05950 62 CRLRLLK|LE 0.092 . TA05950 65 RLLKLER|IK 0.080 . TA05950 67 LKLERIK|DY 0.063 . TA05950 80 EEYITNK|SL 0.083 . TA05950 84 TNKSLHK|PL 0.066 . TA05950 87 SLHKPLK|TK 0.069 . TA05950 89 HKPLKTK|NQ 0.068 . TA05950 96 NQDDLIK|LD 0.060 . TA05950 101 IKLDDIR|GS 0.085 . TA05950 139 ILSFVDK|EL 0.076 . TA05950 153 SVLLHNK|TN 0.063 . TA05950 173 PLVSVMK|VE 0.059 . TA05950 176 SVMKVEK|AP 0.061 . TA05950 196 EQIQEIK|EA 0.059 . TA05950 205 VELPLTR|PE 0.064 . TA05950 215 YDDIGIK|PP 0.058 . TA05950 218 IGIKPPK|GV 0.088 . TA05950 230 GPPGTGK|TL 0.061 . TA05950 235 GKTLLAK|AV 0.077 . TA05950 247 TSATFLR|VV 0.199 . TA05950 256 GSELIQK|YL 0.081 . TA05950 263 YLGEGPK|LV 0.072 . TA05950 266 EGPKLVR|EM 0.076 . TA05950 270 LVREMFK|VA 0.087 . TA05950 291 IDAIGTK|RY 0.059 . TA05950 292 DAIGTKR|YD 0.183 . TA05950 301 ATSGGEK|EI 0.062 . TA05950 305 GEKEIQR|TM 0.080 . TA05950 324 DSQSDVK|VI 0.061 . TA05950 331 VIMATNK|IE 0.059 . TA05950 341 LDPALIR|PG 0.079 . TA05950 344 ALIRPGR|ID 0.232 . TA05950 347 RPGRIDR|KI 0.195 . TA05950 348 PGRIDRK|IQ 0.075 . TA05950 357 LPNPDSK|TK 0.076 . TA05950 359 NPDSKTK|RK 0.069 . TA05950 360 PDSKTKR|KI 0.344 . TA05950 361 DSKTKRK|IF 0.105 . TA05950 369 FEIHTSK|MT 0.064 . TA05950 374 SKMTMSK|DV 0.116 . TA05950 385 DEFVVNK|DD 0.064 . TA05950 394 LSGADIK|AM 0.065 . TA05950 406 AGLLALR|ER 0.068 . TA05950 408 LLALRER|RM 0.082 . TA05950 409 LALRERR|MQ 0.397 . TA05950 419 TQADLMK|AK 0.102 . TA05950 421 ADLMKAK|EK 0.059 . TA05950 423 LMKAKEK|VL 0.075 . TA05950 428 EKVLFQK|KG 0.059 . TA05950 429 KVLFQKK|GN 0.080 . ____________________________^_________________

  • Fasta :-

    >TA05950 ATGGGAAATACTCAAGGAACGGGTAATTCACCAGATGATAAAAAGGACAAGAATGATGGT AGACAAAGTCGTTCAGACCAGCCAGTTACATTTGGTAAACGAAAAAGGAAAATGTTAAGG CAATTGGCGCCAGTAAGAATACCAACAGTCACTCCAAATTCAAAATGCCGATTAAGATTG TTAAAACTTGAAAGAATCAAGGATTATTTATTACTAGAAGAGGAGTATATAACAAATAAA TCTTTACATAAACCCTTGAAAACAAAGAACCAAGATGACTTGATAAAGCTCGATGATATC AGAGGATCCCCAATGAGCGTGGGAACCCTGGAGGAGATCATCGACGAGAACCACGCCATC GTAACATCCTCAATAGGACCTGAATATTATGTTAATATACTCTCCTTTGTGGACAAGGAG CTCCTGGAGCCAGGCTGTTCAGTGCTATTGCACAACAAAACCAATAGTATAGTGGGAATA CTCTTGGACGACGTTGACCCACTGGTGTCCGTGATGAAGGTGGAAAAGGCACCTCTTGAG TCGTATGATGATATTGGAGGGCTTGAGGAACAGATTCAAGAGATCAAAGAGGCAGTTGAG CTACCGTTAACAAGGCCTGAGCTGTACGACGATATCGGTATTAAACCTCCAAAAGGTGTA ATTCTATACGGACCACCAGGCACTGGTAAGACTTTATTAGCCAAGGCAGTTGCGAATGAG ACTTCAGCCACTTTTCTTCGTGTAGTAGGGTCTGAGCTTATCCAAAAGTACTTGGGAGAG GGACCTAAGCTTGTCAGGGAGATGTTCAAGGTGGCAGAAGATAATGCCCCCTCAATTATC TTTATTGATGAAATCGATGCGATAGGGACCAAAAGGTACGATGCGACGAGTGGAGGAGAG AAGGAAATCCAGCGTACTATGTTGGAGCTGTTAAACCAGTTGGACGGATTTGACTCTCAA TCGGATGTAAAGGTGATTATGGCGACAAACAAAATTGAATCGCTCGACCCAGCGCTTATT CGACCGGGGAGAATCGATAGGAAGATCCAGCTCCCGAACCCAGACAGCAAAACTAAGCGC AAGATATTCGAAATCCACACATCGAAGATGACCATGAGCAAGGATGTGGACCTGGACGAG TTCGTGGTCAATAAGGACGACCTCAGCGGAGCAGATATTAAGGCAATGTGTACAGAAGCA GGTTTGCTGGCGCTCAGAGAACGCAGAATGCAAATTACTCAAGCCGATTTAATGAAAGCA AAAGAAAAGGTTCTGTTTCAGAAAAAGGGCAATGTACCCGATGTCCTCTATTGCTAA
  • Download Fasta

  • Fasta :-

    MGNTQGTGNSPDDKKDKNDGRQSRSDQPVTFGKRKRKMLRQLAPVRIPTVTPNSKCRLRL LKLERIKDYLLLEEEYITNKSLHKPLKTKNQDDLIKLDDIRGSPMSVGTLEEIIDENHAI VTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVDPLVSVMKVEKAPLE SYDDIGGLEEQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPPGTGKTLLAKAVANE TSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAPSIIFIDEIDAIGTKRYDATSGGE KEIQRTMLELLNQLDGFDSQSDVKVIMATNKIESLDPALIRPGRIDRKIQLPNPDSKTKR KIFEIHTSKMTMSKDVDLDEFVVNKDDLSGADIKAMCTEAGLLALRERRMQITQADLMKA KEKVLFQKKGNVPDVLYC

    No Results
  • title: ATP binding site
  • coordinates: P225,P226,G227,T228,G229,K230,T231,L232,D283,N330
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA0595023 SDGRQSRSDQ0.998unspTA05950297 SYDATSGGEK0.997unsp

TA05950      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India