TA06255 | 26S proteasome subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA06255OTHER0.9999250.0000160.000059
No Results

  • Fasta :-

    >TA06255 MKDAEEDSEEKKKTVPLSETEVKILKSYGVGPYAAPIRAADNDIKEVINRINKLSGVKES DTGLNPPHMWDLVLDQRSLQEGAPLQVARCTNIINPGTPQAKYIINVKQIAKFVVGLGEK AAATDIEEGIRVGVDRNKYKIQITLPPKIDPSVTMMTVEEKPNITYNDIGGCKDQLEKLR EVVEMPLLQPERFVQLGIDPPNGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQN IIIILNDEIRYVGEGARLVRELFQMARSKKACILFIDEVDAIGGSRGEDASNGDHEVQRT MLEIVNQLDGFDARGNIKVLMATNRPDTLDSALLRPGRIDRRIEFGLPDLEGRKHIFKIH SRTMSVDKNIRYELLARLCPNSTGADLRSVCTEAGMFAIRARRKSISEKDLIDAISKVIK GYKKFSATGRYMVYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA06255.fa Sequence name : TA06255 Sequence length : 435 VALUES OF COMPUTED PARAMETERS Coef20 : 2.881 CoefTot : -0.113 ChDiff : 3 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 2.153 0.337 0.719 MesoH : -0.648 0.504 -0.300 0.232 MuHd_075 : 18.879 7.668 5.859 3.381 MuHd_095 : 22.679 10.506 6.567 2.840 MuHd_100 : 29.149 13.692 8.099 3.502 MuHd_105 : 32.520 15.759 8.520 4.077 Hmax_075 : -15.167 -5.950 -6.407 -0.618 Hmax_095 : -9.000 -1.900 -4.884 0.060 Hmax_100 : -8.800 -1.100 -4.413 0.060 Hmax_105 : -7.000 -1.400 -3.934 -0.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9931 0.0069 DFMC : 0.9941 0.0059
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 435 TA06255 MKDAEEDSEEKKKTVPLSETEVKILKSYGVGPYAAPIRAADNDIKEVINRINKLSGVKESDTGLNPPHMWDLVLDQRSLQ 80 EGAPLQVARCTNIINPGTPQAKYIINVKQIAKFVVGLGEKAAATDIEEGIRVGVDRNKYKIQITLPPKIDPSVTMMTVEE 160 KPNITYNDIGGCKDQLEKLREVVEMPLLQPERFVQLGIDPPNGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQN 240 IIIILNDEIRYVGEGARLVRELFQMARSKKACILFIDEVDAIGGSRGEDASNGDHEVQRTMLEIVNQLDGFDARGNIKVL 320 MATNRPDTLDSALLRPGRIDRRIEFGLPDLEGRKHIFKIHSRTMSVDKNIRYELLARLCPNSTGADLRSVCTEAGMFAIR 400 ARRKSISEKDLIDAISKVIKGYKKFSATGRYMVYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA06255 2 -----MK|DA 0.081 . TA06255 11 EEDSEEK|KK 0.053 . TA06255 12 EDSEEKK|KT 0.106 . TA06255 13 DSEEKKK|TV 0.150 . TA06255 23 LSETEVK|IL 0.067 . TA06255 26 TEVKILK|SY 0.092 . TA06255 38 PYAAPIR|AA 0.111 . TA06255 45 AADNDIK|EV 0.068 . TA06255 50 IKEVINR|IN 0.085 . TA06255 53 VINRINK|LS 0.148 . TA06255 58 NKLSGVK|ES 0.062 . TA06255 77 DLVLDQR|SL 0.105 . TA06255 89 APLQVAR|CT 0.140 . TA06255 102 PGTPQAK|YI 0.074 . TA06255 108 KYIINVK|QI 0.063 . TA06255 112 NVKQIAK|FV 0.076 . TA06255 120 VVGLGEK|AA 0.059 . TA06255 131 DIEEGIR|VG 0.062 . TA06255 136 IRVGVDR|NK 0.145 . TA06255 138 VGVDRNK|YK 0.066 . TA06255 140 VDRNKYK|IQ 0.072 . TA06255 148 QITLPPK|ID 0.060 . TA06255 161 MMTVEEK|PN 0.064 . TA06255 173 NDIGGCK|DQ 0.064 . TA06255 178 CKDQLEK|LR 0.061 . TA06255 180 DQLEKLR|EV 0.092 . TA06255 192 PLLQPER|FV 0.117 . TA06255 214 GPPGTGK|TL 0.062 . TA06255 219 GKTLTAR|AV 0.113 . TA06255 224 ARAVANR|TD 0.087 . TA06255 250 ILNDEIR|YV 0.211 . TA06255 257 YVGEGAR|LV 0.107 . TA06255 260 EGARLVR|EL 0.257 . TA06255 267 ELFQMAR|SK 0.116 . TA06255 269 FQMARSK|KA 0.073 . TA06255 270 QMARSKK|AC 0.315 . TA06255 286 DAIGGSR|GE 0.087 . TA06255 299 GDHEVQR|TM 0.108 . TA06255 314 LDGFDAR|GN 0.144 . TA06255 318 DARGNIK|VL 0.059 . TA06255 325 VLMATNR|PD 0.072 . TA06255 335 LDSALLR|PG 0.090 . TA06255 338 ALLRPGR|ID 0.229 . TA06255 341 RPGRIDR|RI 0.423 . TA06255 342 PGRIDRR|IE 0.104 . TA06255 353 LPDLEGR|KH 0.084 . TA06255 354 PDLEGRK|HI 0.075 . TA06255 358 GRKHIFK|IH 0.068 . TA06255 362 IFKIHSR|TM 0.081 . TA06255 368 RTMSVDK|NI 0.070 . TA06255 371 SVDKNIR|YE 0.072 . TA06255 377 RYELLAR|LC 0.070 . TA06255 388 STGADLR|SV 0.270 . TA06255 400 AGMFAIR|AR 0.088 . TA06255 402 MFAIRAR|RK 0.147 . TA06255 403 FAIRARR|KS 0.311 . TA06255 404 AIRARRK|SI 0.157 . TA06255 409 RKSISEK|DL 0.117 . TA06255 417 LIDAISK|VI 0.056 . TA06255 420 AISKVIK|GY 0.077 . TA06255 423 KVIKGYK|KF 0.069 . TA06255 424 VIKGYKK|FS 0.123 . TA06255 430 KFSATGR|YM 0.106 . ____________________________^_________________

  • Fasta :-

    >TA06255 ATGAAGGACGCTGAGGAGGATTCTGAGGAAAAGAAGAAAACCGTACCACTTTCTGAAACA GAAGTTAAAATTTTAAAATCATACGGAGTTGGACCTTATGCAGCTCCAATTCGTGCAGCT GATAATGATATAAAAGAAGTTATTAACAGAATTAATAAATTATCAGGAGTTAAGGAAAGT GATACTGGATTAAATCCTCCTCATATGTGGGACTTAGTGCTTGATCAACGTTCCTTACAG GAAGGAGCGCCACTTCAAGTAGCAAGATGTACTAATATTATTAACCCTGGAACTCCACAA GCTAAATACATCATCAACGTTAAACAAATCGCCAAATTCGTTGTGGGATTGGGAGAGAAG GCCGCCGCTACGGATATAGAGGAGGGTATAAGAGTTGGAGTTGACCGTAACAAGTACAAG ATCCAGATAACCTTGCCGCCTAAAATTGACCCGTCTGTAACCATGATGACAGTTGAGGAG AAGCCAAACATCACATACAACGATATAGGTGGATGTAAGGATCAACTAGAGAAGTTAAGG GAGGTGGTTGAGATGCCTCTTTTACAGCCTGAACGTTTTGTACAGCTAGGAATTGACCCA CCAAACGGAGTTTTACTTTACGGACCACCAGGAACTGGTAAAACCTTAACAGCTAGAGCT GTTGCAAATCGAACTGACGCTTGTTTTATATGCGTCATAGGCTCAGAACTTGTTCAAAAT ATAATAATAATACTGAATGATGAAATTAGATATGTTGGAGAAGGAGCCAGACTTGTTAGA GAACTGTTCCAGATGGCAAGGAGTAAGAAGGCATGTATATTATTTATTGATGAAGTTGAT GCCATTGGAGGTTCCAGAGGTGAGGACGCGTCAAATGGTGATCACGAGGTTCAGCGAACA ATGCTCGAGATTGTGAATCAGCTAGATGGGTTTGATGCCAGGGGTAATATTAAAGTACTA ATGGCCACGAACAGGCCTGATACACTAGACTCAGCACTACTAAGACCAGGACGTATAGAT AGACGTATAGAATTTGGATTACCAGATCTAGAGGGTAGAAAACATATATTTAAGATCCAT TCAAGGACGATGAGCGTGGATAAGAACATAAGATACGAGTTGTTGGCCAGACTCTGTCCA AACAGCACAGGAGCAGACCTAAGAAGCGTGTGTACAGAGGCCGGAATGTTCGCAATCAGA GCCAGACGTAAGAGTATCTCAGAGAAGGACCTGATTGACGCCATTTCTAAAGTCATTAAA GGTTATAAGAAGTTCTCAGCAACTGGAAGATACATGGTCTACAACTGA
  • Download Fasta

  • Fasta :-

    MKDAEEDSEEKKKTVPLSETEVKILKSYGVGPYAAPIRAADNDIKEVINRINKLSGVKES DTGLNPPHMWDLVLDQRSLQEGAPLQVARCTNIINPGTPQAKYIINVKQIAKFVVGLGEK AAATDIEEGIRVGVDRNKYKIQITLPPKIDPSVTMMTVEEKPNITYNDIGGCKDQLEKLR EVVEMPLLQPERFVQLGIDPPNGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQN IIIILNDEIRYVGEGARLVRELFQMARSKKACILFIDEVDAIGGSRGEDASNGDHEVQRT MLEIVNQLDGFDARGNIKVLMATNRPDTLDSALLRPGRIDRRIEFGLPDLEGRKHIFKIH SRTMSVDKNIRYELLARLCPNSTGADLRSVCTEAGMFAIRARRKSISEKDLIDAISKVIK GYKKFSATGRYMVYN

  • title: ATP binding site
  • coordinates: P209,P210,G211,T212,G213,K214,T215,L216,D277,N324
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA06255405 SARRKSISEK0.998unspTA06255405 SARRKSISEK0.998unspTA06255405 SARRKSISEK0.998unspTA06255407 SRKSISEKDL0.998unspTA0625518 STVPLSETEV0.992unspTA06255291 SGEDASNGDH0.995unsp

TA06255      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India