TA06335 | proteasome subunit beta 7, putative

_IDPredictionOTHERSPmTPCS_Position
TA06335OTHER0.9998280.0000570.000115
No Results

  • Fasta :-

    >TA06335 MNYDYLNTYMSQKGGWDFSNYSRNSRIQNSISGHNYLKTGTTICGVMGRDSVVLAADTRA TQGIIVADKNCSKLHKISDNIYCAGAGVAADLEHTTLWLANNIELHRLNTKKAPRVQMCI SMLVHELFKYQGYKQCALILGGFDYTGPHLFSVSPHGSSDSLPFCTMGSGSLNAMTVLEQ NYFDGMSVEEATELAVKAISAGITNDLGSGGNVDVVVMDKNGSKHSRTFKKVCSRTYAAP DNKLTAGTTEYLREHIEHIKKHIIVDQIDVD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA06335.fa Sequence name : TA06335 Sequence length : 271 VALUES OF COMPUTED PARAMETERS Coef20 : 3.110 CoefTot : -0.291 ChDiff : -1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.512 1.088 0.167 0.536 MesoH : 0.075 0.292 -0.229 0.277 MuHd_075 : 31.096 16.654 8.829 5.435 MuHd_095 : 12.024 8.388 4.452 2.124 MuHd_100 : 10.894 4.852 3.732 1.083 MuHd_105 : 13.645 2.791 3.450 1.428 Hmax_075 : 12.717 6.417 0.967 4.200 Hmax_095 : 6.125 1.837 -0.864 2.800 Hmax_100 : 2.000 -0.200 -3.248 2.000 Hmax_105 : -2.712 -4.025 -3.159 0.933 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9334 0.0666 DFMC : 0.8670 0.1330
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 271 TA06335 MNYDYLNTYMSQKGGWDFSNYSRNSRIQNSISGHNYLKTGTTICGVMGRDSVVLAADTRATQGIIVADKNCSKLHKISDN 80 IYCAGAGVAADLEHTTLWLANNIELHRLNTKKAPRVQMCISMLVHELFKYQGYKQCALILGGFDYTGPHLFSVSPHGSSD 160 SLPFCTMGSGSLNAMTVLEQNYFDGMSVEEATELAVKAISAGITNDLGSGGNVDVVVMDKNGSKHSRTFKKVCSRTYAAP 240 DNKLTAGTTEYLREHIEHIKKHIIVDQIDVD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA06335 13 NTYMSQK|GG 0.063 . TA06335 23 DFSNYSR|NS 0.088 . TA06335 26 NYSRNSR|IQ 0.184 . TA06335 38 SGHNYLK|TG 0.062 . TA06335 49 ICGVMGR|DS 0.099 . TA06335 59 VLAADTR|AT 0.092 . TA06335 69 GIIVADK|NC 0.065 . TA06335 73 ADKNCSK|LH 0.057 . TA06335 76 NCSKLHK|IS 0.079 . TA06335 107 NNIELHR|LN 0.075 . TA06335 111 LHRLNTK|KA 0.071 . TA06335 112 HRLNTKK|AP 0.120 . TA06335 115 NTKKAPR|VQ 0.076 . TA06335 129 LVHELFK|YQ 0.074 . TA06335 134 FKYQGYK|QC 0.072 . TA06335 197 ATELAVK|AI 0.077 . TA06335 220 DVVVMDK|NG 0.061 . TA06335 224 MDKNGSK|HS 0.061 . TA06335 227 NGSKHSR|TF 0.124 . TA06335 230 KHSRTFK|KV 0.240 . TA06335 231 HSRTFKK|VC 0.136 . TA06335 235 FKKVCSR|TY 0.079 . TA06335 243 YAAPDNK|LT 0.058 . TA06335 253 GTTEYLR|EH 0.067 . TA06335 260 EHIEHIK|KH 0.060 . TA06335 261 HIEHIKK|HI 0.100 . ____________________________^_________________

  • Fasta :-

    >TA06335 ATGAATTATGATTATTTGAACACATACATGTCCCAAAAGGGTGGATGGGACTTTTCTAAC TATTCCAGAAATTCAAGAATTCAAAACTCTATCAGTGGTCATAATTATTTGAAAACTGGA ACAACTATTTGTGGAGTAATGGGAAGAGATTCCGTGGTTTTGGCTGCTGATACTAGGGCC ACTCAAGGGATTATAGTAGCAGACAAGAACTGCTCAAAGCTTCACAAGATATCGGATAAC ATCTATTGTGCAGGTGCAGGCGTTGCCGCTGACCTTGAACATACAACTCTATGGCTTGCA AATAATATTGAGCTTCATAGACTAAATACCAAGAAAGCTCCTAGGGTTCAAATGTGCATA TCAATGCTAGTACATGAACTCTTTAAATATCAGGGATACAAACAATGTGCTCTAATTCTC GGAGGTTTTGATTACACTGGTCCTCACCTCTTCTCTGTTTCTCCTCATGGATCTTCTGAC TCACTACCTTTCTGCACTATGGGATCTGGATCTCTCAATGCTATGACTGTTCTCGAACAA AATTATTTCGATGGAATGAGTGTTGAGGAGGCTACGGAATTGGCCGTAAAGGCAATTAGC GCAGGAATCACAAACGATTTGGGTTCAGGAGGGAATGTAGACGTTGTTGTAATGGACAAA AACGGCTCAAAACACTCAAGGACTTTTAAGAAGGTGTGTTCGAGAACCTACGCAGCACCT GATAATAAACTCACAGCGGGAACTACAGAATACCTCAGAGAACATATTGAACACATTAAA AAACACATAATAGTTGATCAAATCGATGTTGACTAA
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  • Fasta :-

    MNYDYLNTYMSQKGGWDFSNYSRNSRIQNSISGHNYLKTGTTICGVMGRDSVVLAADTRA TQGIIVADKNCSKLHKISDNIYCAGAGVAADLEHTTLWLANNIELHRLNTKKAPRVQMCI SMLVHELFKYQGYKQCALILGGFDYTGPHLFSVSPHGSSDSLPFCTMGSGSLNAMTVLEQ NYFDGMSVEEATELAVKAISAGITNDLGSGGNVDVVVMDKNGSKHSRTFKKVCSRTYAAP DNKLTAGTTEYLREHIEHIKKHIIVDQIDVD

  • title: active site
  • coordinates: T41,D57,R59,K73,S169,D206,S209,G210
No Results
No Results
IDSitePeptideScoreMethod
TA06335187 SFDGMSVEEA0.993unsp

TA06335      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India