TA06755 | ubiquitin conjugating enzyme, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA06755OTHER0.9998470.0000760.000078
No Results

  • Fasta :-

    >TA06755 MYMESREHLRLKRELKDIENENDSTVEAYVVDDNIFKWKGHILGPPGTPYEGGHFTLDIS IPEDYPYSPPAIKFETKIWHPNISSETGAICLDILKSEWSPALTIRTALISIQALLSAPE PDDPQDAQVANMYKRNYQEFENTAKLWTSTFARSRDESREGKISLLLEIGIDRESAVRAL EENGWDTTVAINRLMDG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA06755.fa Sequence name : TA06755 Sequence length : 197 VALUES OF COMPUTED PARAMETERS Coef20 : 3.649 CoefTot : -0.157 ChDiff : -13 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.465 0.089 0.428 MesoH : -0.455 0.125 -0.366 0.233 MuHd_075 : 15.735 10.606 6.072 2.474 MuHd_095 : 25.080 12.838 4.281 6.103 MuHd_100 : 35.646 16.552 5.860 8.180 MuHd_105 : 42.775 19.323 8.140 9.481 Hmax_075 : -12.717 0.817 -4.583 -0.677 Hmax_095 : -7.300 3.800 -4.720 2.360 Hmax_100 : -7.300 3.800 -4.720 2.360 Hmax_105 : -2.900 0.300 -4.308 1.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9471 0.0529 DFMC : 0.9687 0.0313
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 197 TA06755 MYMESREHLRLKRELKDIENENDSTVEAYVVDDNIFKWKGHILGPPGTPYEGGHFTLDISIPEDYPYSPPAIKFETKIWH 80 PNISSETGAICLDILKSEWSPALTIRTALISIQALLSAPEPDDPQDAQVANMYKRNYQEFENTAKLWTSTFARSRDESRE 160 GKISLLLEIGIDRESAVRALEENGWDTTVAINRLMDG 240 ............P................................................................... 80 ................................................................................ 160 ..................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TA06755 6 -MYMESR|EH 0.068 . TA06755 10 ESREHLR|LK 0.084 . TA06755 12 REHLRLK|RE 0.061 . TA06755 13 EHLRLKR|EL 0.528 *ProP* TA06755 16 RLKRELK|DI 0.247 . TA06755 37 VDDNIFK|WK 0.069 . TA06755 39 DNIFKWK|GH 0.076 . TA06755 73 YSPPAIK|FE 0.061 . TA06755 77 AIKFETK|IW 0.079 . TA06755 96 ICLDILK|SE 0.057 . TA06755 106 SPALTIR|TA 0.141 . TA06755 134 QVANMYK|RN 0.068 . TA06755 135 VANMYKR|NY 0.235 . TA06755 145 EFENTAK|LW 0.059 . TA06755 153 WTSTFAR|SR 0.260 . TA06755 155 STFARSR|DE 0.114 . TA06755 159 RSRDESR|EG 0.089 . TA06755 162 DESREGK|IS 0.115 . TA06755 173 LEIGIDR|ES 0.064 . TA06755 178 DRESAVR|AL 0.097 . TA06755 193 TTVAINR|LM 0.091 . ____________________________^_________________

  • Fasta :-

    >TA06755 ATGTATATGGAATCCCGGGAACATTTACGTCTAAAAAGAGAACTCAAAGATATAGAAAAC GAAAATGACTCAACAGTTGAGGCATATGTAGTAGATGATAACATTTTCAAGTGGAAAGGG CACATACTCGGACCTCCTGGAACGCCTTATGAAGGAGGTCATTTTACTTTGGATATATCT ATTCCAGAAGATTACCCATACAGTCCGCCCGCGATAAAATTCGAGACTAAAATATGGCAC CCTAACATATCAAGTGAAACTGGAGCTATATGTCTAGATATTCTAAAGAGTGAATGGAGC CCAGCACTGACAATTAGGACCGCTCTAATATCAATCCAAGCACTACTTTCAGCACCTGAA CCAGATGACCCTCAAGACGCACAAGTTGCTAACATGTATAAAAGAAACTACCAAGAGTTC GAAAATACAGCAAAGCTGTGGACGAGTACCTTTGCAAGAAGTCGAGATGAAAGTCGAGAG GGGAAGATTAGTTTACTTTTGGAAATTGGAATTGATCGAGAATCGGCAGTGAGAGCGCTG GAAGAGAACGGATGGGATACGACAGTGGCAATTAATAGACTTATGGATGGATAA
  • Download Fasta

  • Fasta :-

    MYMESREHLRLKRELKDIENENDSTVEAYVVDDNIFKWKGHILGPPGTPYEGGHFTLDIS IPEDYPYSPPAIKFETKIWHPNISSETGAICLDILKSEWSPALTIRTALISIQALLSAPE PDDPQDAQVANMYKRNYQEFENTAKLWTSTFARSRDESREGKISLLLEIGIDRESAVRAL EENGWDTTVAINRLMDG

  • title: active site cysteine
  • coordinates: C91
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA06755T560.5740.078TA06755T760.5150.046
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA06755T560.5740.078TA06755T760.5150.046
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA06755158 SSRDESREGK0.997unspTA06755158 SSRDESREGK0.997unspTA06755158 SSRDESREGK0.997unspTA0675524 SNENDSTVEA0.991unspTA06755154 STFARSRDES0.996unsp

TA06755      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India