TA07050 | methionine aminopeptidase 1, putative

_IDPredictionOTHERSPmTPCS_Position
TA07050OTHER0.9998740.0000520.000074
No Results

  • Fasta :-

    >TA07050 MEIMNIDSKGSPESDFYLKKFRNFKFTGDLRPWPITDIKRVPKHIPKPDYADDGVPYSEI DQKFSSAIKVHDPQTIKKIRRACLLGRKALDLANTLIKPGITTDEIDTKVHEFIVSHNGY PSPLNYYNFPKSICTSVNEVVCHGIPDLRPLEEGDIVNVDISVYLNGVHGDLNETFYVGE VDDDSMRLTEGTYASLMEAIKQCKPGMYYREIGNIINDVADKFGYFFNLILPRLSVIRSY CGHGIGTEFHCCPNIPHYRKNKAIGILRPNQVWSLNMSLGTFRDVKWPDKWTVVTTDGKR SAQFEHTLLVTNTGVEVLTKRLESSPPLGFDTTKF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA07050.fa Sequence name : TA07050 Sequence length : 335 VALUES OF COMPUTED PARAMETERS Coef20 : 3.152 CoefTot : 0.000 ChDiff : -1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.047 0.935 -0.067 0.447 MesoH : -0.841 0.054 -0.410 0.176 MuHd_075 : 2.284 2.128 0.958 2.080 MuHd_095 : 12.420 9.771 5.291 2.255 MuHd_100 : 16.153 10.357 5.997 2.844 MuHd_105 : 18.201 9.113 5.784 3.116 Hmax_075 : 0.800 3.000 -1.668 2.600 Hmax_095 : 2.300 3.325 -1.854 2.607 Hmax_100 : 2.300 6.800 -0.083 3.560 Hmax_105 : 2.333 7.700 -0.349 4.667 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9926 0.0074 DFMC : 0.9958 0.0042
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 335 TA07050 MEIMNIDSKGSPESDFYLKKFRNFKFTGDLRPWPITDIKRVPKHIPKPDYADDGVPYSEIDQKFSSAIKVHDPQTIKKIR 80 RACLLGRKALDLANTLIKPGITTDEIDTKVHEFIVSHNGYPSPLNYYNFPKSICTSVNEVVCHGIPDLRPLEEGDIVNVD 160 ISVYLNGVHGDLNETFYVGEVDDDSMRLTEGTYASLMEAIKQCKPGMYYREIGNIINDVADKFGYFFNLILPRLSVIRSY 240 CGHGIGTEFHCCPNIPHYRKNKAIGILRPNQVWSLNMSLGTFRDVKWPDKWTVVTTDGKRSAQFEHTLLVTNTGVEVLTK 320 RLESSPPLGFDTTKF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA07050 9 IMNIDSK|GS 0.065 . TA07050 19 ESDFYLK|KF 0.058 . TA07050 20 SDFYLKK|FR 0.106 . TA07050 22 FYLKKFR|NF 0.075 . TA07050 25 KKFRNFK|FT 0.264 . TA07050 31 KFTGDLR|PW 0.064 . TA07050 39 WPITDIK|RV 0.071 . TA07050 40 PITDIKR|VP 0.103 . TA07050 43 DIKRVPK|HI 0.133 . TA07050 47 VPKHIPK|PD 0.066 . TA07050 63 YSEIDQK|FS 0.082 . TA07050 69 KFSSAIK|VH 0.063 . TA07050 77 HDPQTIK|KI 0.058 . TA07050 78 DPQTIKK|IR 0.104 . TA07050 80 QTIKKIR|RA 0.096 . TA07050 81 TIKKIRR|AC 0.158 . TA07050 87 RACLLGR|KA 0.095 . TA07050 88 ACLLGRK|AL 0.067 . TA07050 98 LANTLIK|PG 0.061 . TA07050 109 TDEIDTK|VH 0.066 . TA07050 131 NYYNFPK|SI 0.112 . TA07050 149 HGIPDLR|PL 0.087 . TA07050 187 VDDDSMR|LT 0.082 . TA07050 201 SLMEAIK|QC 0.065 . TA07050 204 EAIKQCK|PG 0.061 . TA07050 210 KPGMYYR|EI 0.168 . TA07050 222 INDVADK|FG 0.058 . TA07050 233 FNLILPR|LS 0.063 . TA07050 238 PRLSVIR|SY 0.154 . TA07050 259 PNIPHYR|KN 0.095 . TA07050 260 NIPHYRK|NK 0.076 . TA07050 262 PHYRKNK|AI 0.233 . TA07050 268 KAIGILR|PN 0.071 . TA07050 283 MSLGTFR|DV 0.124 . TA07050 286 GTFRDVK|WP 0.115 . TA07050 290 DVKWPDK|WT 0.061 . TA07050 299 VVTTDGK|RS 0.060 . TA07050 300 VTTDGKR|SA 0.187 . TA07050 320 GVEVLTK|RL 0.065 . TA07050 321 VEVLTKR|LE 0.111 . TA07050 334 LGFDTTK|F- 0.072 . ____________________________^_________________

  • Fasta :-

    >TA07050 ATGGAAATTATGAACATTGACTCCAAAGGCTCTCCTGAGTCTGACTTTTACCTCAAGAAG TTTAGAAACTTTAAGTTCACGGGAGATTTGCGCCCCTGGCCCATTACTGATATTAAAAGG GTGCCGAAACACATTCCAAAACCTGACTACGCAGATGACGGAGTTCCTTATTCAGAAATT GACCAAAAATTTTCAAGTGCAATCAAGGTTCACGACCCACAAACCATTAAAAAAATAAGA AGGGCTTGTTTACTTGGAAGAAAAGCTTTGGATTTGGCTAACACTCTTATAAAACCTGGT ATAACCACTGATGAGATTGACACTAAAGTCCATGAATTTATCGTTTCCCACAACGGTTAC CCCTCTCCACTTAACTACTACAACTTTCCCAAATCCATTTGCACATCTGTAAATGAAGTA GTTTGTCACGGAATTCCCGATCTTAGACCATTGGAAGAAGGCGATATAGTAAATGTTGAT ATTTCGGTGTATTTGAACGGGGTTCATGGTGACTTGAACGAGACGTTTTACGTTGGTGAA GTGGATGATGACTCAATGAGGTTGACTGAGGGTACCTACGCCTCACTAATGGAGGCAATT AAACAATGTAAACCAGGAATGTACTACCGCGAAATTGGTAATATTATCAACGACGTAGCT GATAAATTCGGGTATTTCTTTAATCTAATATTGCCTAGACTATCTGTAATTCGTTCTTAC TGCGGGCATGGTATTGGTACTGAATTCCATTGTTGTCCTAACATACCTCATTACAGGAAA AATAAAGCCATAGGAATTTTGAGGCCGAATCAAGTTTGGAGTTTAAATATGAGTTTAGGA ACTTTCAGAGATGTAAAATGGCCTGATAAGTGGACTGTAGTAACTACTGATGGTAAAAGG TCTGCTCAATTTGAGCATACACTTCTCGTTACTAATACAGGAGTTGAGGTTTTAACTAAG AGGTTGGAATCTTCCCCTCCTTTGGGTTTTGACACGACAAAGTTTTAG
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  • Fasta :-

    MEIMNIDSKGSPESDFYLKKFRNFKFTGDLRPWPITDIKRVPKHIPKPDYADDGVPYSEI DQKFSSAIKVHDPQTIKKIRRACLLGRKALDLANTLIKPGITTDEIDTKVHEFIVSHNGY PSPLNYYNFPKSICTSVNEVVCHGIPDLRPLEEGDIVNVDISVYLNGVHGDLNETFYVGE VDDDSMRLTEGTYASLMEAIKQCKPGMYYREIGNIINDVADKFGYFFNLILPRLSVIRSY CGHGIGTEFHCCPNIPHYRKNKAIGILRPNQVWSLNMSLGTFRDVKWPDKWTVVTTDGKR SAQFEHTLLVTNTGVEVLTKRLESSPPLGFDTTKF

  • title: active site
  • coordinates: H143,D160,D171,H243,N276,E305
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA07050T3320.5650.056TA07050T3330.5580.023
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA07050T3320.5650.056TA07050T3330.5580.023
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA0705058 SGVPYSEIDQ0.995unspTA0705058 SGVPYSEIDQ0.995unspTA0705058 SGVPYSEIDQ0.995unspTA07050235 SLPRLSVIRS0.995unspTA0705011 SDSKGSPESD0.997unspTA0705050 YPKPDYADDG0.99unsp

TA07050      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India