TA07380 | 26S proteasome (regulatory) subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA07380OTHER0.9881710.0091020.002727
No Results

  • Fasta :-

    >TA07380 MELVNKTSPLGMGTKVVVHPIVLLSVVDHYNRCAQGTSRRVVGTILGETISGELHITNSY AIPFEEDTKNPLVWYFDHNYHENMFKMFKKINAKERVLGWYSTGPKCKLADLEIHEIYRK YCPHPIYIIVDITQKDELPIEAYLSVEEPTSDSRFRRTFVHVPFSVGSFDAEEVGLEHLL RDLTNSTTSTLSKKVESKISALRSLVSKLTEMVDYLGGVISGTYTLNPSIVYMLQDIFNM FPAMDDEELIEAFAINMNDTTMTSYLGTIIRTMIALHNLINNMAENKRRSQLKLSSTT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA07380.fa Sequence name : TA07380 Sequence length : 298 VALUES OF COMPUTED PARAMETERS Coef20 : 3.389 CoefTot : -2.019 ChDiff : -6 ZoneTo : 47 KR : 5 DE : 2 CleavSite : 42 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.159 1.659 0.088 0.576 MesoH : -0.126 0.478 -0.287 0.305 MuHd_075 : 28.698 29.569 10.820 7.280 MuHd_095 : 48.333 27.338 11.986 10.366 MuHd_100 : 43.929 24.970 11.756 9.320 MuHd_105 : 40.163 23.735 11.387 8.782 Hmax_075 : 15.867 27.067 4.656 7.513 Hmax_095 : 11.463 13.825 3.411 4.419 Hmax_100 : 12.100 14.500 3.669 4.420 Hmax_105 : 12.250 14.817 3.969 4.818 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5908 0.4092 DFMC : 0.7561 0.2439
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 298 TA07380 MELVNKTSPLGMGTKVVVHPIVLLSVVDHYNRCAQGTSRRVVGTILGETISGELHITNSYAIPFEEDTKNPLVWYFDHNY 80 HENMFKMFKKINAKERVLGWYSTGPKCKLADLEIHEIYRKYCPHPIYIIVDITQKDELPIEAYLSVEEPTSDSRFRRTFV 160 HVPFSVGSFDAEEVGLEHLLRDLTNSTTSTLSKKVESKISALRSLVSKLTEMVDYLGGVISGTYTLNPSIVYMLQDIFNM 240 FPAMDDEELIEAFAINMNDTTMTSYLGTIIRTMIALHNLINNMAENKRRSQLKLSSTT 320 ................................................................................ 80 ............................................................................P... 160 ................................................................................ 240 .......................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TA07380 6 -MELVNK|TS 0.058 . TA07380 15 PLGMGTK|VV 0.062 . TA07380 32 VVDHYNR|CA 0.075 . TA07380 39 CAQGTSR|RV 0.099 . TA07380 40 AQGTSRR|VV 0.357 . TA07380 69 PFEEDTK|NP 0.053 . TA07380 86 YHENMFK|MF 0.070 . TA07380 89 NMFKMFK|KI 0.074 . TA07380 90 MFKMFKK|IN 0.118 . TA07380 94 FKKINAK|ER 0.057 . TA07380 96 KINAKER|VL 0.141 . TA07380 106 WYSTGPK|CK 0.063 . TA07380 108 STGPKCK|LA 0.088 . TA07380 119 EIHEIYR|KY 0.089 . TA07380 120 IHEIYRK|YC 0.069 . TA07380 135 IVDITQK|DE 0.061 . TA07380 154 EPTSDSR|FR 0.077 . TA07380 156 TSDSRFR|RT 0.111 . TA07380 157 SDSRFRR|TF 0.716 *ProP* TA07380 181 GLEHLLR|DL 0.134 . TA07380 193 TTSTLSK|KV 0.103 . TA07380 194 TSTLSKK|VE 0.092 . TA07380 198 SKKVESK|IS 0.058 . TA07380 203 SKISALR|SL 0.128 . TA07380 208 LRSLVSK|LT 0.081 . TA07380 271 YLGTIIR|TM 0.077 . TA07380 287 NNMAENK|RR 0.060 . TA07380 288 NMAENKR|RS 0.131 . TA07380 289 MAENKRR|SQ 0.207 . TA07380 293 KRRSQLK|LS 0.086 . ____________________________^_________________

  • Fasta :-

    >TA07380 ATGGAGTTAGTGAATAAAACCTCCCCTCTGGGTATGGGCACTAAGGTCGTGGTTCATCCC ATTGTTCTTCTCTCCGTTGTGGACCATTACAACAGGTGTGCCCAGGGCACTTCCCGGAGA GTTGTTGGCACGATTTTGGGCGAGACAATCAGTGGAGAACTCCACATCACAAATTCTTAC GCTATCCCTTTCGAGGAAGACACGAAAAACCCTCTCGTTTGGTACTTTGATCACAATTAT CATGAGAATATGTTCAAAATGTTCAAAAAGATTAATGCTAAAGAGCGTGTTCTTGGTTGG TATAGTACTGGTCCGAAGTGCAAATTGGCTGACTTAGAAATTCACGAAATTTATCGCAAA TACTGTCCACATCCAATCTACATTATTGTAGATATCACTCAAAAGGATGAATTGCCCATT GAGGCTTACTTATCTGTTGAGGAACCTACTAGTGACTCTCGCTTCCGCAGAACTTTTGTT CACGTTCCATTTTCTGTTGGTTCTTTTGATGCTGAGGAGGTTGGTTTGGAGCATCTTCTC AGAGATTTAACCAATTCCACTACTTCTACACTCTCCAAAAAGGTCGAGAGTAAGATTAGT GCTTTGAGATCTCTGGTTTCTAAGCTTACTGAAATGGTTGACTATCTCGGCGGTGTTATT TCAGGAACTTACACCCTAAATCCATCAATAGTATATATGTTACAGGACATATTTAACATG TTTCCAGCCATGGACGATGAAGAACTAATTGAGGCGTTTGCGATTAATATGAACGACACG ACGATGACTTCGTACCTCGGAACCATCATCAGAACAATGATTGCACTCCACAATCTTATA AATAACATGGCCGAAAATAAGAGAAGATCCCAACTTAAATTGTCATCCACAACTTAA
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  • Fasta :-

    MELVNKTSPLGMGTKVVVHPIVLLSVVDHYNRCAQGTSRRVVGTILGETISGELHITNSY AIPFEEDTKNPLVWYFDHNYHENMFKMFKKINAKERVLGWYSTGPKCKLADLEIHEIYRK YCPHPIYIIVDITQKDELPIEAYLSVEEPTSDSRFRRTFVHVPFSVGSFDAEEVGLEHLL RDLTNSTTSTLSKKVESKISALRSLVSKLTEMVDYLGGVISGTYTLNPSIVYMLQDIFNM FPAMDDEELIEAFAINMNDTTMTSYLGTIIRTMIALHNLINNMAENKRRSQLKLSSTT

    No Results
    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA07380T2980.5370.019TA07380T2970.5060.029
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA07380T2980.5370.019TA07380T2970.5060.029
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA07380145 SEAYLSVEEP0.997unspTA07380192 STSTLSKKVE0.993unsp

TA07380      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India