TA08080 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA08080OTHER0.9999490.0000470.000004
No Results

  • Fasta :-

    >TA08080 MTIEAALICIDNSEYSRNGDFVPTRLGAQIDAIGLIASAKLSEQFENSVGIVCLARKGSQ LLTAPSNDLGTFLTDLQTVVPHSQSDFIRGIQTAQLALKHRLNKSQQQRIICFVASPIVE PVKHFVKLGKLLKKNNVILDIIDISNNSETEEKLKTLHSAVNNNDTSHYLCCKPCSGTLL SDMIFNSAVLYGQSGGVGGGSQISQNLTDFGVDPEMDPQLYMALRLSLEQEEERLRKEAT KMQNKTESTLTDIENELKGMEGLQVVPLDKCVEILSTSEGNPELLESLVYSFPDVDSEEP RIQVKFDFNENIVGIGCKVEGTTTKVTVIPNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA08080.fa Sequence name : TA08080 Sequence length : 332 VALUES OF COMPUTED PARAMETERS Coef20 : 3.726 CoefTot : 0.000 ChDiff : -13 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.965 1.506 0.148 0.549 MesoH : -0.446 0.305 -0.328 0.187 MuHd_075 : 13.059 4.546 3.035 2.801 MuHd_095 : 11.893 2.563 3.831 1.663 MuHd_100 : 23.519 7.284 7.171 0.797 MuHd_105 : 30.358 11.423 9.338 2.201 Hmax_075 : 1.400 6.883 0.411 3.267 Hmax_095 : 1.050 5.688 0.434 2.065 Hmax_100 : 7.100 7.300 1.064 2.250 Hmax_105 : 12.200 11.000 3.694 3.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9900 0.0100 DFMC : 0.9829 0.0171
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 332 TA08080 MTIEAALICIDNSEYSRNGDFVPTRLGAQIDAIGLIASAKLSEQFENSVGIVCLARKGSQLLTAPSNDLGTFLTDLQTVV 80 PHSQSDFIRGIQTAQLALKHRLNKSQQQRIICFVASPIVEPVKHFVKLGKLLKKNNVILDIIDISNNSETEEKLKTLHSA 160 VNNNDTSHYLCCKPCSGTLLSDMIFNSAVLYGQSGGVGGGSQISQNLTDFGVDPEMDPQLYMALRLSLEQEEERLRKEAT 240 KMQNKTESTLTDIENELKGMEGLQVVPLDKCVEILSTSEGNPELLESLVYSFPDVDSEEPRIQVKFDFNENIVGIGCKVE 320 GTTTKVTVIPNK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA08080 17 DNSEYSR|NG 0.084 . TA08080 25 GDFVPTR|LG 0.089 . TA08080 40 GLIASAK|LS 0.086 . TA08080 56 GIVCLAR|KG 0.098 . TA08080 57 IVCLARK|GS 0.067 . TA08080 89 SQSDFIR|GI 0.189 . TA08080 99 TAQLALK|HR 0.059 . TA08080 101 QLALKHR|LN 0.097 . TA08080 104 LKHRLNK|SQ 0.226 . TA08080 109 NKSQQQR|II 0.128 . TA08080 123 PIVEPVK|HF 0.061 . TA08080 127 PVKHFVK|LG 0.053 . TA08080 130 HFVKLGK|LL 0.064 . TA08080 133 KLGKLLK|KN 0.066 . TA08080 134 LGKLLKK|NN 0.075 . TA08080 153 NSETEEK|LK 0.053 . TA08080 155 ETEEKLK|TL 0.066 . TA08080 173 SHYLCCK|PC 0.067 . TA08080 225 QLYMALR|LS 0.087 . TA08080 234 LEQEEER|LR 0.076 . TA08080 236 QEEERLR|KE 0.068 . TA08080 237 EEERLRK|EA 0.267 . TA08080 241 LRKEATK|MQ 0.083 . TA08080 245 ATKMQNK|TE 0.061 . TA08080 258 DIENELK|GM 0.062 . TA08080 270 QVVPLDK|CV 0.069 . TA08080 301 VDSEEPR|IQ 0.097 . TA08080 305 EPRIQVK|FD 0.071 . TA08080 318 IVGIGCK|VE 0.062 . TA08080 325 VEGTTTK|VT 0.058 . TA08080 332 VTVIPNK|-- 0.066 . ____________________________^_________________

  • Fasta :-

    >TA08080 ATGACGATAGAAGCAGCTTTGATCTGTATAGATAATTCCGAATATTCCAGAAATGGAGAT TTCGTACCTACCAGGCTAGGTGCACAAATTGACGCCATAGGATTGATAGCAAGCGCTAAA CTATCTGAACAATTTGAAAATTCAGTTGGAATTGTATGCCTTGCACGTAAAGGATCTCAA CTACTAACGGCTCCATCAAATGATTTGGGAACCTTCCTAACTGATTTACAAACAGTGGTT CCACACTCTCAATCTGATTTCATAAGGGGTATACAGACAGCCCAGTTGGCCTTAAAGCAT AGGCTGAATAAGTCACAACAGCAACGTATAATATGCTTTGTAGCAAGCCCTATAGTTGAG CCCGTAAAACATTTCGTTAAACTTGGGAAACTTTTAAAGAAAAACAACGTTATTCTAGAT ATAATTGACATCTCAAACAACTCTGAAACTGAAGAGAAGCTAAAGACTCTTCACTCAGCC GTAAATAACAATGACACTAGTCACTATCTTTGCTGCAAGCCATGCTCAGGCACTCTATTA AGTGATATGATTTTCAACTCGGCAGTGTTATATGGGCAATCCGGCGGCGTTGGAGGTGGA TCCCAAATATCACAGAATCTCACAGATTTCGGAGTTGACCCTGAGATGGACCCTCAGTTG TACATGGCCTTGAGATTATCGCTAGAGCAGGAGGAAGAAAGACTGAGGAAGGAAGCTACT AAAATGCAGAATAAAACAGAATCAACATTAACTGATATAGAAAATGAATTAAAAGGAATG GAAGGACTCCAAGTTGTTCCCCTGGATAAGTGTGTAGAAATACTTTCCACCAGTGAAGGG AACCCTGAACTCCTAGAGTCACTCGTGTATTCATTCCCAGATGTAGATAGCGAGGAACCT AGAATACAGGTAAAATTCGATTTTAATGAAAACATTGTAGGAATTGGTTGCAAAGTTGAA GGAACTACAACAAAAGTTACAGTGATTCCAAATAAATAA
  • Download Fasta

  • Fasta :-

    MTIEAALICIDNSEYSRNGDFVPTRLGAQIDAIGLIASAKLSEQFENSVGIVCLARKGSQ LLTAPSNDLGTFLTDLQTVVPHSQSDFIRGIQTAQLALKHRLNKSQQQRIICFVASPIVE PVKHFVKLGKLLKKNNVILDIIDISNNSETEEKLKTLHSAVNNNDTSHYLCCKPCSGTLL SDMIFNSAVLYGQSGGVGGGSQISQNLTDFGVDPEMDPQLYMALRLSLEQEEERLRKEAT KMQNKTESTLTDIENELKGMEGLQVVPLDKCVEILSTSEGNPELLESLVYSFPDVDSEEP RIQVKFDFNENIVGIGCKVEGTTTKVTVIPNK

  • title: metal ion-dependent adhesion site (MIDAS)
  • coordinates: D11,S85,A115
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA08080227 SALRLSLEQE0.994unspTA08080227 SALRLSLEQE0.994unspTA08080227 SALRLSLEQE0.994unspTA0808083 SVVPHSQSDF0.997unspTA08080148 SISNNSETEE0.993unsp

TA08080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India