TA08465 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA08465OTHER0.9991980.0002200.000582
No Results

  • Fasta :-

    >TA08465 MSRSKLSDFNAGESYQHLGSKCFHSTPLTNIKWKVHPMVIFTILDSYMRREDGQYNVIGT LLGVVCEANTVEITDSFVDRHSLTDEGLLQIIKDHHENMYELKQKINPKEQVVGWFCTGS EMTELTCAVHGWFKQFNSVSKFYPNPNLYEPIHLLVDASCDSASMMIKAYVQLPLTITKD ACFQFHEVDLELLVSPSDTAGISYLLKSLDNSKSRNPHNSDTLLPNTFENSLLKLKDLID KCIKLVENAMEKGNSKIYPEVGRFLLKTVSTEKLMNLKKIEKICELSLQDNLMVTVKIHI WCRSPTWQTWQTYNSRSLST
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA08465.fa Sequence name : TA08465 Sequence length : 320 VALUES OF COMPUTED PARAMETERS Coef20 : 3.574 CoefTot : 0.480 ChDiff : -3 ZoneTo : 7 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.835 1.471 0.084 0.524 MesoH : -0.246 0.302 -0.344 0.237 MuHd_075 : 20.570 8.154 3.965 3.055 MuHd_095 : 5.566 5.564 4.559 0.171 MuHd_100 : 11.565 6.189 4.723 2.364 MuHd_105 : 16.418 9.251 4.699 3.811 Hmax_075 : 2.537 -1.050 -2.673 1.076 Hmax_095 : -4.812 -0.875 -2.602 0.980 Hmax_100 : -0.500 1.500 -1.622 2.020 Hmax_105 : 6.600 1.900 -1.520 1.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9822 0.0178 DFMC : 0.9664 0.0336
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 320 TA08465 MSRSKLSDFNAGESYQHLGSKCFHSTPLTNIKWKVHPMVIFTILDSYMRREDGQYNVIGTLLGVVCEANTVEITDSFVDR 80 HSLTDEGLLQIIKDHHENMYELKQKINPKEQVVGWFCTGSEMTELTCAVHGWFKQFNSVSKFYPNPNLYEPIHLLVDASC 160 DSASMMIKAYVQLPLTITKDACFQFHEVDLELLVSPSDTAGISYLLKSLDNSKSRNPHNSDTLLPNTFENSLLKLKDLID 240 KCIKLVENAMEKGNSKIYPEVGRFLLKTVSTEKLMNLKKIEKICELSLQDNLMVTVKIHIWCRSPTWQTWQTYNSRSLST 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA08465 3 ----MSR|SK 0.099 . TA08465 5 --MSRSK|LS 0.059 . TA08465 21 YQHLGSK|CF 0.063 . TA08465 32 TPLTNIK|WK 0.061 . TA08465 34 LTNIKWK|VH 0.075 . TA08465 49 ILDSYMR|RE 0.073 . TA08465 50 LDSYMRR|ED 0.223 . TA08465 80 TDSFVDR|HS 0.139 . TA08465 93 GLLQIIK|DH 0.060 . TA08465 103 ENMYELK|QK 0.064 . TA08465 105 MYELKQK|IN 0.069 . TA08465 109 KQKINPK|EQ 0.065 . TA08465 134 AVHGWFK|QF 0.061 . TA08465 141 QFNSVSK|FY 0.064 . TA08465 168 SASMMIK|AY 0.077 . TA08465 179 LPLTITK|DA 0.083 . TA08465 207 GISYLLK|SL 0.089 . TA08465 213 KSLDNSK|SR 0.070 . TA08465 215 LDNSKSR|NP 0.096 . TA08465 234 FENSLLK|LK 0.061 . TA08465 236 NSLLKLK|DL 0.065 . TA08465 241 LKDLIDK|CI 0.066 . TA08465 244 LIDKCIK|LV 0.070 . TA08465 252 VENAMEK|GN 0.075 . TA08465 256 MEKGNSK|IY 0.063 . TA08465 263 IYPEVGR|FL 0.098 . TA08465 267 VGRFLLK|TV 0.081 . TA08465 273 KTVSTEK|LM 0.054 . TA08465 278 EKLMNLK|KI 0.064 . TA08465 279 KLMNLKK|IE 0.098 . TA08465 282 NLKKIEK|IC 0.061 . TA08465 297 NLMVTVK|IH 0.061 . TA08465 303 KIHIWCR|SP 0.176 . TA08465 316 WQTYNSR|SL 0.131 . ____________________________^_________________

  • Fasta :-

    >TA08465 ATGAGTAGAAGTAAACTTTCAGATTTCAACGCAGGGGAATCCTACCAACACTTGGGATCC AAATGCTTCCACTCCACGCCTCTAACAAATATTAAGTGGAAGGTACATCCGATGGTGATT TTTACGATTTTGGATTCTTATATGAGGCGAGAAGATGGACAATACAATGTTATTGGTACT CTTTTAGGAGTTGTTTGCGAAGCTAACACAGTTGAAATCACAGATTCCTTCGTTGATAGA CATTCCCTAACTGACGAGGGGCTATTGCAAATTATAAAAGATCATCACGAAAATATGTAC GAACTAAAACAAAAAATTAATCCAAAGGAACAAGTAGTTGGATGGTTTTGTACTGGGTCT GAGATGACTGAACTGACCTGTGCAGTACATGGATGGTTTAAACAGTTCAACTCAGTGTCA AAGTTTTACCCAAACCCTAACCTCTATGAACCAATACACTTGCTAGTTGACGCATCCTGT GACAGTGCGTCAATGATGATCAAGGCCTACGTTCAACTACCACTGACAATCACAAAAGAT GCTTGCTTCCAGTTCCATGAAGTCGATTTAGAGCTCTTGGTCTCCCCGTCAGATACAGCA GGAATTTCATACCTGCTAAAGTCGCTAGATAACTCGAAAAGTAGGAACCCACATAACTCA GATACTCTACTCCCGAACACATTCGAAAACTCTCTGCTAAAGCTTAAGGACCTTATTGAT AAGTGTATAAAACTAGTGGAAAACGCAATGGAAAAGGGTAATTCTAAAATATACCCAGAA GTGGGAAGGTTCCTGCTAAAGACAGTGTCGACGGAGAAGCTCATGAACCTGAAAAAGATA GAGAAAATATGCGAACTTTCACTCCAGGATAACCTCATGGTAACCGTAAAAATTCATATT TGGTGCAGATCGCCTACCTGGCAAACCTGGCAAACCTACAATTCGCGCTCTCTGAGCACC TAA
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  • Fasta :-

    MSRSKLSDFNAGESYQHLGSKCFHSTPLTNIKWKVHPMVIFTILDSYMRREDGQYNVIGT LLGVVCEANTVEITDSFVDRHSLTDEGLLQIIKDHHENMYELKQKINPKEQVVGWFCTGS EMTELTCAVHGWFKQFNSVSKFYPNPNLYEPIHLLVDASCDSASMMIKAYVQLPLTITKD ACFQFHEVDLELLVSPSDTAGISYLLKSLDNSKSRNPHNSDTLLPNTFENSLLKLKDLID KCIKLVENAMEKGNSKIYPEVGRFLLKTVSTEKLMNLKKIEKICELSLQDNLMVTVKIHI WCRSPTWQTWQTYNSRSLST

    No Results
    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA08465T3200.5890.034TA08465S3190.5060.029
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA08465T3200.5890.034TA08465S3190.5060.029
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA0846582 SVDRHSLTDE0.998unspTA08465195 SELLVSPSDT0.995unsp

TA08465      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India