TA08700 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA08700OTHER0.9999440.0000510.000005
No Results

  • Fasta :-

    >TA08700 MADDVVELDSSESECSFAEFDLNEWFKYYNDLCFNGTIPHVELSWSKRMTRCAGICQVKP EGICRIRLSEALLKYRTIKDCKETLLHEMIHAYLILNRLDRMFAHGPKFIWQMKRINEMT GLNVTVFHDFNDEVNYYLKHIWRCDGICRFKEPFFGYVKRAVNRSPGPNDLWWDKHEKEC GGKFIKISNDLNVSTKNRVNKNKKIHNNTIEKYFNNGMDDTDDMGSVSAPIIID
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA08700.fa Sequence name : TA08700 Sequence length : 234 VALUES OF COMPUTED PARAMETERS Coef20 : 3.581 CoefTot : 0.141 ChDiff : -1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.465 0.500 -0.173 0.259 MesoH : -1.452 -0.002 -0.547 0.068 MuHd_075 : 27.704 11.945 7.667 2.653 MuHd_095 : 19.025 10.704 3.062 3.467 MuHd_100 : 16.581 10.329 4.309 2.490 MuHd_105 : 15.216 13.166 5.520 2.825 Hmax_075 : 13.767 13.067 3.670 3.232 Hmax_095 : 5.163 8.575 -0.235 2.975 Hmax_100 : 2.500 7.900 -0.405 2.760 Hmax_105 : -1.283 7.200 -1.192 2.110 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8797 0.1203 DFMC : 0.8906 0.1094
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 234 TA08700 MADDVVELDSSESECSFAEFDLNEWFKYYNDLCFNGTIPHVELSWSKRMTRCAGICQVKPEGICRIRLSEALLKYRTIKD 80 CKETLLHEMIHAYLILNRLDRMFAHGPKFIWQMKRINEMTGLNVTVFHDFNDEVNYYLKHIWRCDGICRFKEPFFGYVKR 160 AVNRSPGPNDLWWDKHEKECGGKFIKISNDLNVSTKNRVNKNKKIHNNTIEKYFNNGMDDTDDMGSVSAPIIID 240 ................................................................................ 80 ................................................................................ 160 .......................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA08700 27 DLNEWFK|YY 0.074 . TA08700 47 VELSWSK|RM 0.052 . TA08700 48 ELSWSKR|MT 0.353 . TA08700 51 WSKRMTR|CA 0.417 . TA08700 59 AGICQVK|PE 0.064 . TA08700 65 KPEGICR|IR 0.068 . TA08700 67 EGICRIR|LS 0.084 . TA08700 74 LSEALLK|YR 0.062 . TA08700 76 EALLKYR|TI 0.091 . TA08700 79 LKYRTIK|DC 0.191 . TA08700 82 RTIKDCK|ET 0.062 . TA08700 98 AYLILNR|LD 0.070 . TA08700 101 ILNRLDR|MF 0.328 . TA08700 108 MFAHGPK|FI 0.077 . TA08700 114 KFIWQMK|RI 0.065 . TA08700 115 FIWQMKR|IN 0.175 . TA08700 139 EVNYYLK|HI 0.065 . TA08700 143 YLKHIWR|CD 0.104 . TA08700 149 RCDGICR|FK 0.099 . TA08700 151 DGICRFK|EP 0.057 . TA08700 159 PFFGYVK|RA 0.052 . TA08700 160 FFGYVKR|AV 0.312 . TA08700 164 VKRAVNR|SP 0.177 . TA08700 175 NDLWWDK|HE 0.060 . TA08700 178 WWDKHEK|EC 0.069 . TA08700 183 EKECGGK|FI 0.066 . TA08700 186 CGGKFIK|IS 0.062 . TA08700 196 DLNVSTK|NR 0.061 . TA08700 198 NVSTKNR|VN 0.091 . TA08700 201 TKNRVNK|NK 0.220 . TA08700 203 NRVNKNK|KI 0.083 . TA08700 204 RVNKNKK|IH 0.090 . TA08700 212 HNNTIEK|YF 0.075 . ____________________________^_________________

  • Fasta :-

    >TA08700 ATGGCAGATGATGTTGTTGAGCTGGATTCCAGCGAATCGGAGTGCTCTTTCGCGGAGTTT GATTTAAACGAATGGTTTAAGTATTATAATGACCTTTGTTTCAACGGAACCATCCCTCAC GTGGAGTTGTCCTGGAGTAAAAGGATGACCAGATGTGCAGGAATATGCCAAGTCAAGCCT GAAGGAATATGCCGTATAAGGCTTAGCGAGGCTCTACTCAAGTACAGAACAATTAAAGAT TGCAAGGAGACTCTGTTACATGAAATGATCCATGCGTATCTCATCTTAAACAGATTAGAC CGTATGTTCGCACACGGGCCGAAATTTATTTGGCAAATGAAGAGAATTAACGAGATGACA GGGCTCAATGTAACTGTGTTCCACGATTTTAATGATGAAGTTAATTACTACCTTAAACAC ATTTGGAGATGTGACGGTATTTGCAGGTTCAAAGAGCCTTTTTTCGGATACGTTAAACGT GCCGTGAACCGGAGTCCAGGCCCAAATGACCTATGGTGGGATAAACACGAAAAGGAGTGC GGTGGTAAATTCATTAAGATCTCAAATGATTTAAATGTGTCGACTAAGAATCGAGTCAAC AAAAATAAAAAAATCCATAACAACACAATTGAAAAGTACTTTAACAACGGTATGGATGAT ACTGACGATATGGGCTCAGTCAGCGCGCCAATCATCATTGACTGA
  • Download Fasta

  • Fasta :-

    MADDVVELDSSESECSFAEFDLNEWFKYYNDLCFNGTIPHVELSWSKRMTRCAGICQVKP EGICRIRLSEALLKYRTIKDCKETLLHEMIHAYLILNRLDRMFAHGPKFIWQMKRINEMT GLNVTVFHDFNDEVNYYLKHIWRCDGICRFKEPFFGYVKRAVNRSPGPNDLWWDKHEKEC GGKFIKISNDLNVSTKNRVNKNKKIHNNTIEKYFNNGMDDTDDMGSVSAPIIID

    No Results
    No Results
No Results
No Results
No Results

TA08700      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India