TA08760 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA08760OTHER0.9407590.0327150.026526
No Results

  • Fasta :-

    >TA08760 MYDSKIFKKLLYKNAGVIMLGTFVSNNIITLRWVNEDSMAPILCPSPNFRVLVLRATKYH KNDVIMYNNPNTGKESYGRLTSFNTSQQIASMANNIPSGHCWVENDNPRSDSDDSNKFGP VSFSIHFVLNHINI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA08760.fa Sequence name : TA08760 Sequence length : 134 VALUES OF COMPUTED PARAMETERS Coef20 : 3.839 CoefTot : -1.052 ChDiff : 3 ZoneTo : 35 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.529 0.146 0.599 MesoH : -0.898 0.053 -0.506 0.106 MuHd_075 : 38.409 24.197 11.543 8.462 MuHd_095 : 31.820 19.626 9.001 6.573 MuHd_100 : 25.435 17.288 7.749 5.866 MuHd_105 : 20.827 16.819 6.404 5.034 Hmax_075 : 13.300 22.488 3.812 5.800 Hmax_095 : 12.075 12.425 1.894 4.497 Hmax_100 : 11.500 15.900 1.885 5.900 Hmax_105 : 11.400 20.000 2.122 5.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7768 0.2232 DFMC : 0.7459 0.2541
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 134 TA08760 MYDSKIFKKLLYKNAGVIMLGTFVSNNIITLRWVNEDSMAPILCPSPNFRVLVLRATKYHKNDVIMYNNPNTGKESYGRL 80 TSFNTSQQIASMANNIPSGHCWVENDNPRSDSDDSNKFGPVSFSIHFVLNHINI 160 ................................................................................ 80 ...................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA08760 5 --MYDSK|IF 0.058 . TA08760 8 YDSKIFK|KL 0.068 . TA08760 9 DSKIFKK|LL 0.104 . TA08760 13 FKKLLYK|NA 0.077 . TA08760 32 NNIITLR|WV 0.106 . TA08760 50 CPSPNFR|VL 0.078 . TA08760 55 FRVLVLR|AT 0.101 . TA08760 58 LVLRATK|YH 0.085 . TA08760 61 RATKYHK|ND 0.056 . TA08760 74 NNPNTGK|ES 0.064 . TA08760 79 GKESYGR|LT 0.102 . TA08760 109 VENDNPR|SD 0.125 . TA08760 117 DSDDSNK|FG 0.063 . ____________________________^_________________

  • Fasta :-

    >TA08760 ATGTATGATAGTAAGATATTTAAGAAACTCCTCTATAAGAACGCTGGAGTAATAATGCTT GGAACATTTGTATCAAATAATATCATCACATTGAGATGGGTGAATGAAGATTCAATGGCG CCGATACTATGCCCGTCACCTAATTTTAGAGTCTTGGTACTCAGAGCTACAAAATATCAC AAAAATGATGTTATCATGTATAATAACCCAAACACAGGGAAGGAATCTTATGGAAGATTA ACATCATTTAACACATCGCAACAAATTGCATCAATGGCAAACAATATTCCATCAGGACAC TGCTGGGTAGAAAACGATAATCCAAGGTCTGATTCAGATGATAGTAATAAGTTTGGACCT GTGAGTTTTTCTATTCATTTTGTTCTTAATCACATAAATATTTAA
  • Download Fasta

  • Fasta :-

    MYDSKIFKKLLYKNAGVIMLGTFVSNNIITLRWVNEDSMAPILCPSPNFRVLVLRATKYH KNDVIMYNNPNTGKESYGRLTSFNTSQQIASMANNIPSGHCWVENDNPRSDSDDSNKFGP VSFSIHFVLNHINI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA08760110 SDNPRSDSDD0.991unspTA08760115 SDSDDSNKFG0.995unsp

TA08760      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India