TA10110 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA10110OTHER0.9999460.0000280.000027
No Results

  • Fasta :-

    >TA10110 MIDQHGPEAWYMGLPRCTRTFITVLLGLTLLSFFKVLDPYKLSLNWELVLQKFQIWRLVT SFLYVGPFSLRWIFFILLFSQFSSSLENNSVFLHSPGAYLYFLFVQSISLACISAAFFWP IGYPYLADSLLFAIIYYWSKRDMWTIVSIYFFNVKAYQLPFALLFLHLVMGSSLWVDIMG MISGHLFYLVREVLPSKEDPLTREGLDSGTIQDHLNPEDEFLLAEELDWVTHNYFKCNI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA10110.fa Sequence name : TA10110 Sequence length : 239 VALUES OF COMPUTED PARAMETERS Coef20 : 3.431 CoefTot : 0.000 ChDiff : -6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.982 2.212 0.356 0.735 MesoH : 1.079 1.119 0.021 0.537 MuHd_075 : 11.760 2.094 1.590 1.587 MuHd_095 : 25.177 17.486 8.271 5.999 MuHd_100 : 11.184 11.428 6.064 3.274 MuHd_105 : 5.272 3.278 2.886 0.690 Hmax_075 : 7.583 2.625 -0.330 3.372 Hmax_095 : 12.775 8.925 2.650 4.489 Hmax_100 : 2.600 5.600 0.542 3.660 Hmax_105 : 4.400 3.383 -0.169 2.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9650 0.0350 DFMC : 0.9747 0.0253
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 239 TA10110 MIDQHGPEAWYMGLPRCTRTFITVLLGLTLLSFFKVLDPYKLSLNWELVLQKFQIWRLVTSFLYVGPFSLRWIFFILLFS 80 QFSSSLENNSVFLHSPGAYLYFLFVQSISLACISAAFFWPIGYPYLADSLLFAIIYYWSKRDMWTIVSIYFFNVKAYQLP 160 FALLFLHLVMGSSLWVDIMGMISGHLFYLVREVLPSKEDPLTREGLDSGTIQDHLNPEDEFLLAEELDWVTHNYFKCNI 240 ................................................................................ 80 ................................................................................ 160 ............................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >TA10110 ATGATTGATCAACATGGGCCTGAAGCCTGGTATATGGGTCTTCCCAGATGTACTCGCACA TTTATCACAGTTCTTCTTGGTCTTACTTTACTTTCATTCTTTAAGGTCCTAGACCCATAC AAACTTTCACTAAACTGGGAACTGGTGTTACAAAAATTCCAAATTTGGCGCCTTGTTACT TCATTTCTATATGTCGGACCCTTTTCACTCAGGTGGATATTTTTTATCCTCTTATTTTCA CAGTTTTCATCCTCACTCGAGAATAACTCAGTGTTTTTGCACTCTCCTGGAGCATACCTC TACTTTCTATTCGTTCAGTCGATTTCGCTCGCCTGCATTAGCGCTGCCTTTTTCTGGCCA ATCGGATACCCTTACTTGGCCGATTCTCTACTGTTCGCAATAATTTATTACTGGTCAAAG AGGGATATGTGGACGATCGTTTCGATATACTTCTTTAACGTTAAGGCCTATCAACTTCCA TTTGCACTACTTTTCTTGCACCTAGTTATGGGCTCATCCCTGTGGGTTGACATTATGGGC ATGATATCAGGCCACCTGTTCTACTTAGTTCGAGAAGTTTTGCCAAGCAAAGAAGATCCG CTCACCAGGGAGGGTCTAGATTCCGGTACGATCCAAGACCACCTGAACCCAGAGGACGAA TTTTTATTGGCAGAGGAATTAGATTGGGTGACTCATAATTATTTTAAATGTAACATATAA
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  • Fasta :-

    MIDQHGPEAWYMGLPRCTRTFITVLLGLTLLSFFKVLDPYKLSLNWELVLQKFQIWRLVT SFLYVGPFSLRWIFFILLFSQFSSSLENNSVFLHSPGAYLYFLFVQSISLACISAAFFWP IGYPYLADSLLFAIIYYWSKRDMWTIVSIYFFNVKAYQLPFALLFLHLVMGSSLWVDIMG MISGHLFYLVREVLPSKEDPLTREGLDSGTIQDHLNPEDEFLLAEELDWVTHNYFKCNI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA1011085 SQFSSSLENN0.991unspTA10110196 SEVLPSKEDP0.997unsp

TA10110      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India