TA10875 | proteasome beta 3 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA10875SP0.3943130.6052920.000395CS pos: 20-21. ITS-YN. Pr: 0.6692
No Results

  • Fasta :-

    >TA10875 MVWRILILIYFHYNFGDITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFK VTESCFFAASGLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWF VDSVIAGLDTDSSPYITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFE TVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLKTRMD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA10875.fa Sequence name : TA10875 Sequence length : 220 VALUES OF COMPUTED PARAMETERS Coef20 : 4.168 CoefTot : -1.321 ChDiff : -5 ZoneTo : 31 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.418 1.624 0.364 0.601 MesoH : -0.053 0.506 -0.150 0.291 MuHd_075 : 22.747 11.249 5.290 4.316 MuHd_095 : 20.094 14.311 4.707 3.572 MuHd_100 : 19.312 11.836 4.063 2.637 MuHd_105 : 25.325 18.717 6.138 5.005 Hmax_075 : 18.667 16.917 2.564 6.767 Hmax_095 : 11.638 11.813 2.144 4.944 Hmax_100 : 15.700 14.200 2.144 4.950 Hmax_105 : 14.600 18.500 1.684 6.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9395 0.0605 DFMC : 0.9544 0.0456
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 220 TA10875 MVWRILILIYFHYNFGDITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLK 80 DEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYITCFDLVGAPCTPTDFVVAGTCSEQ 160 LYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLKTRMD 240 ................................................................................ 80 ................................................................................ 160 ............................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA10875 4 ---MVWR|IL 0.095 . TA10875 41 VAIACDK|RL 0.060 . TA10875 42 AIACDKR|LG 0.135 . TA10875 57 VSSNFPK|AF 0.089 . TA10875 60 NFPKAFK|VT 0.062 . TA10875 80 TDVQTLK|DE 0.063 . TA10875 86 KDEIMFK|VN 0.064 . TA10875 91 FKVNMYK|LR 0.084 . TA10875 93 VNMYKLR|GD 0.092 . TA10875 96 YKLRGDK|EM 0.098 . TA10875 101 DKEMSVK|TL 0.073 . TA10875 114 GSMLYSR|RF 0.103 . TA10875 115 SMLYSRR|FG 0.136 . TA10875 170 VCEALFK|PG 0.060 . TA10875 192 LMAGIDR|DC 0.093 . TA10875 209 HVITPDR|VI 0.119 . TA10875 213 PDRVISR|SL 0.137 . TA10875 216 VISRSLK|TR 0.138 . TA10875 218 SRSLKTR|MD 0.162 . ____________________________^_________________

  • Fasta :-

    >TA10875 ATGGTTTGGAGAATATTAATACTTATTTATTTTCACTACAATTTTGGTGATATCACATCC TATAATGGCGGCGCATTGGTTGCCATGATGGGAGAAGGATGTGTAGCTATCGCATGTGAT AAGAGACTTGGACTAAACCAACAAGTTACAGTTAGCTCAAACTTCCCAAAGGCGTTTAAA GTAACTGAATCATGTTTTTTTGCAGCCTCAGGACTGGCAACAGACGTTCAAACACTGAAG GATGAAATAATGTTCAAGGTTAACATGTATAAACTGAGAGGAGATAAGGAAATGAGTGTT AAAACTCTTTCAAACATGGTTGGATCGATGCTCTATTCAAGGCGTTTTGGGCCTTGGTTT GTGGACTCAGTGATTGCGGGATTAGATACTGATAGTTCCCCTTATATCACATGTTTTGAT CTTGTCGGAGCGCCCTGTACACCAACAGATTTTGTCGTTGCCGGTACTTGCTCAGAACAA CTTTACGGTGTTTGCGAAGCTCTATTCAAGCCAGGAATGGATCCAGAACAACTTTTTGAA ACTGTTTCACAATGTTTAATGGCTGGAATTGATCGAGATTGCCTTTCAGGTTGGGGTGCC GAAGTCCATGTTATCACTCCCGATCGAGTAATTTCAAGATCATTAAAAACCAGAATGGAC TAA
  • Download Fasta

  • Fasta :-

    MVWRILILIYFHYNFGDITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFK VTESCFFAASGLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWF VDSVIAGLDTDSSPYITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFE TVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLKTRMD

  • title: active site
  • coordinates: G24,D40,R42,K57,T156,D193,S196,G197
IDSitePositionGscoreIscore
TA10875T2170.5220.031
IDSitePositionGscoreIscore
TA10875T2170.5220.031
No Results

TA10875      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India