TA11060 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA11060OTHER0.9998500.0001500.000000
No Results

  • Fasta :-

    >TA11060 MEGQQTENVHKKPEESANSKFECNICFDDVKDPVVTRCGHLFCWSCLLSWMNRRNYQCPI CQAGISRDNVIPLYGHGQNQSDPRDKPEEPRPKAQRSTNNQRQNSFFRGYENRISVSFGS FPFSFIFPIAFGTSNTGSFFDLFRNDESSSNMTSEIFVKICSEQRRAYAYTGFLSLIGLL MIAYLILCI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA11060.fa Sequence name : TA11060 Sequence length : 189 VALUES OF COMPUTED PARAMETERS Coef20 : 2.636 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.400 2.782 0.583 0.912 MesoH : 0.019 0.580 -0.182 0.288 MuHd_075 : 8.362 2.783 2.199 1.665 MuHd_095 : 28.384 15.294 7.566 4.629 MuHd_100 : 27.967 14.831 8.644 4.942 MuHd_105 : 30.160 14.407 9.933 5.160 Hmax_075 : -8.700 -6.500 -5.093 -0.090 Hmax_095 : -2.713 -1.925 -3.312 0.578 Hmax_100 : -5.000 -3.400 -3.921 1.130 Hmax_105 : 3.800 -0.700 -1.694 1.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9956 0.0044 DFMC : 0.9967 0.0033
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 189 TA11060 MEGQQTENVHKKPEESANSKFECNICFDDVKDPVVTRCGHLFCWSCLLSWMNRRNYQCPICQAGISRDNVIPLYGHGQNQ 80 SDPRDKPEEPRPKAQRSTNNQRQNSFFRGYENRISVSFGSFPFSFIFPIAFGTSNTGSFFDLFRNDESSSNMTSEIFVKI 160 CSEQRRAYAYTGFLSLIGLLMIAYLILCI 240 ................................................................................ 80 ................................................................................ 160 ............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA11060 11 QTENVHK|KP 0.065 . TA11060 12 TENVHKK|PE 0.155 . TA11060 20 EESANSK|FE 0.068 . TA11060 31 ICFDDVK|DP 0.061 . TA11060 37 KDPVVTR|CG 0.076 . TA11060 53 LLSWMNR|RN 0.095 . TA11060 54 LSWMNRR|NY 0.120 . TA11060 67 CQAGISR|DN 0.097 . TA11060 84 QNQSDPR|DK 0.111 . TA11060 86 QSDPRDK|PE 0.067 . TA11060 91 DKPEEPR|PK 0.076 . TA11060 93 PEEPRPK|AQ 0.063 . TA11060 96 PRPKAQR|ST 0.188 . TA11060 102 RSTNNQR|QN 0.096 . TA11060 108 RQNSFFR|GY 0.129 . TA11060 113 FRGYENR|IS 0.087 . TA11060 144 SFFDLFR|ND 0.085 . TA11060 159 TSEIFVK|IC 0.079 . TA11060 165 KICSEQR|RA 0.085 . TA11060 166 ICSEQRR|AY 0.181 . ____________________________^_________________

  • Fasta :-

    >TA11060 ATGGAAGGGCAACAAACTGAAAATGTACACAAAAAGCCTGAAGAATCTGCCAACTCAAAG TTCGAATGTAACATATGTTTCGATGATGTTAAAGATCCAGTCGTTACCAGGTGTGGACAC CTGTTCTGTTGGTCGTGCCTACTCTCCTGGATGAACCGCAGAAATTATCAGTGTCCAATA TGCCAAGCAGGAATTTCAAGAGATAACGTTATACCATTATACGGACATGGCCAAAACCAA AGTGATCCAAGGGATAAACCTGAAGAACCAAGACCCAAAGCACAAAGATCAACAAATAAT CAAAGACAAAATTCGTTTTTTCGAGGATATGAAAATAGAATATCAGTATCATTTGGATCG TTTCCGTTTTCCTTCATTTTCCCGATCGCATTTGGAACGAGCAATACAGGATCATTTTTT GACCTTTTCAGAAATGACGAATCCTCATCAAATATGACCTCAGAAATATTTGTGAAAATT TGTTCAGAGCAAAGAAGAGCTTATGCTTATACCGGATTTCTCTCCCTTATAGGACTACTC ATGATCGCATATCTAATTCTTTGTATTTAA
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  • Fasta :-

    MEGQQTENVHKKPEESANSKFECNICFDDVKDPVVTRCGHLFCWSCLLSWMNRRNYQCPI CQAGISRDNVIPLYGHGQNQSDPRDKPEEPRPKAQRSTNNQRQNSFFRGYENRISVSFGS FPFSFIFPIAFGTSNTGSFFDLFRNDESSSNMTSEIFVKICSEQRRAYAYTGFLSLIGLL MIAYLILCI

  • title: Zn binding site
  • coordinates: C23,C26,C38,H40,C43,C46,C58,C61
IDSitePositionGscoreIscore
TA11060T60.5380.081
IDSitePositionGscoreIscore
TA11060T60.5380.081
No Results

TA11060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India