TA11345 | proteasome subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA11345OTHER0.9999670.0000210.000012
No Results

  • Fasta :-

    >TA11345 MSYDRAITIFSPDGHLMQVEYAMEAVKRGGCVVGVKSNDVVVIAAERKSTTKLQDPRCNK KILQLDENLALAFAGLNADARVLANKTRLECQRYKLNMDEAATVGYIAKYIARLQQKYTH KGGVRLFGVSLLVVGFDYNGKPALFQTEPSGIYSSWKAQSIGKNSKHVQEYLEKNYKEDL SSDEAVMLAVKALFEVVEVSAKSLELAVLVPGGMQILEESELEKIVEKLKAEKLES
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA11345.fa Sequence name : TA11345 Sequence length : 236 VALUES OF COMPUTED PARAMETERS Coef20 : 3.580 CoefTot : -0.045 ChDiff : 1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.506 1.694 0.042 0.521 MesoH : -0.929 0.117 -0.511 0.131 MuHd_075 : 28.305 14.192 6.061 4.118 MuHd_095 : 12.125 8.070 2.796 2.530 MuHd_100 : 14.670 12.882 4.883 4.256 MuHd_105 : 16.037 16.205 5.967 5.687 Hmax_075 : 13.387 9.363 1.308 3.640 Hmax_095 : 7.525 4.463 -0.313 3.124 Hmax_100 : 8.000 10.500 0.002 3.880 Hmax_105 : 4.700 10.000 -0.265 4.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9838 0.0162 DFMC : 0.9852 0.0148
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 236 TA11345 MSYDRAITIFSPDGHLMQVEYAMEAVKRGGCVVGVKSNDVVVIAAERKSTTKLQDPRCNKKILQLDENLALAFAGLNADA 80 RVLANKTRLECQRYKLNMDEAATVGYIAKYIARLQQKYTHKGGVRLFGVSLLVVGFDYNGKPALFQTEPSGIYSSWKAQS 160 IGKNSKHVQEYLEKNYKEDLSSDEAVMLAVKALFEVVEVSAKSLELAVLVPGGMQILEESELEKIVEKLKAEKLES 240 ................................................................................ 80 ................................................................................ 160 ............................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA11345 5 --MSYDR|AI 0.083 . TA11345 27 YAMEAVK|RG 0.063 . TA11345 28 AMEAVKR|GG 0.201 . TA11345 36 GCVVGVK|SN 0.080 . TA11345 47 VVIAAER|KS 0.076 . TA11345 48 VIAAERK|ST 0.138 . TA11345 52 ERKSTTK|LQ 0.061 . TA11345 57 TKLQDPR|CN 0.095 . TA11345 60 QDPRCNK|KI 0.101 . TA11345 61 DPRCNKK|IL 0.095 . TA11345 81 GLNADAR|VL 0.098 . TA11345 86 ARVLANK|TR 0.060 . TA11345 88 VLANKTR|LE 0.087 . TA11345 93 TRLECQR|YK 0.094 . TA11345 95 LECQRYK|LN 0.067 . TA11345 109 TVGYIAK|YI 0.073 . TA11345 113 IAKYIAR|LQ 0.087 . TA11345 117 IARLQQK|YT 0.094 . TA11345 121 QQKYTHK|GG 0.064 . TA11345 125 THKGGVR|LF 0.097 . TA11345 141 GFDYNGK|PA 0.058 . TA11345 157 GIYSSWK|AQ 0.083 . TA11345 163 KAQSIGK|NS 0.065 . TA11345 166 SIGKNSK|HV 0.086 . TA11345 174 VQEYLEK|NY 0.058 . TA11345 177 YLEKNYK|ED 0.056 . TA11345 191 AVMLAVK|AL 0.063 . TA11345 202 VVEVSAK|SL 0.083 . TA11345 224 EESELEK|IV 0.082 . TA11345 228 LEKIVEK|LK 0.064 . TA11345 230 KIVEKLK|AE 0.055 . TA11345 233 EKLKAEK|LE 0.059 . ____________________________^_________________

  • Fasta :-

    >TA11345 ATGAGTTATGATCGTGCAATAACAATTTTTAGCCCTGACGGGCATTTAATGCAAGTGGAA TATGCAATGGAAGCAGTTAAAAGAGGTGGATGTGTTGTAGGTGTTAAATCAAATGATGTC GTAGTCATTGCCGCAGAAAGGAAAAGTACTACCAAACTTCAAGATCCAAGATGTAATAAG AAAATATTACAATTGGATGAAAATTTAGCTCTAGCATTTGCTGGTCTTAATGCTGATGCT AGAGTATTAGCCAATAAAACAAGATTGGAATGTCAAAGATATAAACTTAATATGGATGAA GCTGCAACTGTTGGATACATTGCCAAATACATCGCAAGATTACAACAAAAATATACACAT AAAGGAGGTGTAAGATTATTTGGAGTTTCATTATTAGTTGTTGGATTTGATTATAATGGT AAACCAGCACTCTTTCAAACTGAACCTTCTGGTATATATTCCTCATGGAAAGCACAATCC ATAGGCAAAAATTCCAAACATGTACAAGAATATTTGGAAAAGAATTATAAAGAAGATTTG AGTAGTGATGAGGCTGTGATGTTGGCAGTTAAAGCATTATTTGAAGTAGTTGAAGTATCT GCCAAGAGTTTAGAATTGGCAGTTTTAGTACCCGGAGGTATGCAAATTTTGGAAGAATCT GAACTTGAAAAAATTGTCGAAAAATTAAAAGCAGAAAAATTGGAATCATAA
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  • Fasta :-

    MSYDRAITIFSPDGHLMQVEYAMEAVKRGGCVVGVKSNDVVVIAAERKSTTKLQDPRCNK KILQLDENLALAFAGLNADARVLANKTRLECQRYKLNMDEAATVGYIAKYIARLQQKYTH KGGVRLFGVSLLVVGFDYNGKPALFQTEPSGIYSSWKAQSIGKNSKHVQEYLEKNYKEDL SSDEAVMLAVKALFEVVEVSAKSLELAVLVPGGMQILEESELEKIVEKLKAEKLES

  • title: active site
  • coordinates: G30,E46,K48,K61,K163
No Results
No Results
IDSitePeptideScoreMethod
TA11345181 SKEDLSSDEA0.991unsp

TA11345      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India