TA11460 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
TA11460OTHER0.9991970.0007540.000049
No Results

  • Fasta :-

    >TA11460 MDSIIGPIPFMTRIYLSTSVFLMILCSLDIISPLNLYMSWTLVFQGEVWRLITCFVYFGS FGMIFFWNIYVLIHYCSSLESVTMHNKPADFLWMLICNGAMLLALAQIFGHSMFYGGTMI NILTYIWGRKNPYSRVGIIFLSVPAPYLPWILAILSYMADYLLNENLLGIFVGHIYYFFT DVFPKMPISGGRQIFATPEFLKILLNQYG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA11460.fa Sequence name : TA11460 Sequence length : 209 VALUES OF COMPUTED PARAMETERS Coef20 : 4.192 CoefTot : -1.417 ChDiff : 0 ZoneTo : 79 KR : 2 DE : 3 CleavSite : 60 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.382 1.982 0.366 0.808 MesoH : 1.082 1.230 0.066 0.537 MuHd_075 : 20.350 21.043 7.267 6.824 MuHd_095 : 23.537 19.922 5.948 6.291 MuHd_100 : 27.113 18.645 6.453 6.192 MuHd_105 : 27.720 19.533 6.975 7.341 Hmax_075 : 18.500 19.600 3.333 6.043 Hmax_095 : 13.700 18.462 4.608 6.878 Hmax_100 : 16.600 20.500 5.581 6.960 Hmax_105 : 20.417 20.650 4.085 7.560 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8312 0.1688 DFMC : 0.8403 0.1597
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 209 TA11460 MDSIIGPIPFMTRIYLSTSVFLMILCSLDIISPLNLYMSWTLVFQGEVWRLITCFVYFGSFGMIFFWNIYVLIHYCSSLE 80 SVTMHNKPADFLWMLICNGAMLLALAQIFGHSMFYGGTMINILTYIWGRKNPYSRVGIIFLSVPAPYLPWILAILSYMAD 160 YLLNENLLGIFVGHIYYFFTDVFPKMPISGGRQIFATPEFLKILLNQYG 240 ................................................................................ 80 ................................................................................ 160 ................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA11460 13 PIPFMTR|IY 0.062 . TA11460 50 FQGEVWR|LI 0.078 . TA11460 87 SVTMHNK|PA 0.063 . TA11460 129 LTYIWGR|KN 0.080 . TA11460 130 TYIWGRK|NP 0.068 . TA11460 135 RKNPYSR|VG 0.088 . TA11460 185 FTDVFPK|MP 0.069 . TA11460 192 MPISGGR|QI 0.113 . TA11460 202 ATPEFLK|IL 0.058 . ____________________________^_________________

  • Fasta :-

    >TA11460 ATGGATTCCATAATAGGACCTATACCATTCATGACCCGAATTTACCTCTCGACGTCAGTC TTTCTGATGATATTATGTTCCTTGGATATTATTAGCCCATTAAACCTATATATGAGCTGG ACGTTGGTATTTCAGGGCGAAGTTTGGCGATTAATTACATGTTTTGTGTATTTCGGGTCG TTCGGGATGATATTTTTCTGGAATATATACGTTTTGATCCACTACTGCAGCTCATTGGAA AGCGTAACAATGCATAACAAACCAGCAGATTTTCTGTGGATGCTAATTTGTAATGGAGCA ATGTTATTAGCGTTGGCTCAAATATTTGGACATAGTATGTTCTATGGTGGAACCATGATT AATATTTTAACATATATTTGGGGAAGGAAAAACCCATATAGTAGAGTGGGTATCATATTT CTATCGGTTCCAGCCCCTTATCTACCATGGATTTTGGCTATATTGTCCTATATGGCAGAT TATTTGCTTAACGAAAATCTATTGGGGATCTTCGTTGGACATATTTACTACTTCTTTACA GACGTTTTCCCCAAAATGCCAATCTCCGGTGGACGTCAAATATTTGCAACGCCAGAGTTC TTGAAAATTCTTTTAAATCAATACGGTTAA
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  • Fasta :-

    MDSIIGPIPFMTRIYLSTSVFLMILCSLDIISPLNLYMSWTLVFQGEVWRLITCFVYFGS FGMIFFWNIYVLIHYCSSLESVTMHNKPADFLWMLICNGAMLLALAQIFGHSMFYGGTMI NILTYIWGRKNPYSRVGIIFLSVPAPYLPWILAILSYMADYLLNENLLGIFVGHIYYFFT DVFPKMPISGGRQIFATPEFLKILLNQYG

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TA11460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India