TA11850 | proteasome regulatory subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA11850OTHER0.9956550.0020900.002256
No Results

  • Fasta :-

    >TA11850 MGDSTRSFQGLFNSFGGMRNMQNFGPLADTSEQVYISSLALLKMLKHGRAGVPMEVMGLM LGDFIDDYTIRVVDVFSMPQSGNSVSVEAVDPVYQTEMKDQLKRTGRPEVVVGWYHSHPG FGCWFSGTDVNTQQSFEQLNPRAVGVVIDPIQSVKGKVVIDCFRLISPHLIMLGHEPRQT TSNIGHLQKPTIIALVHGLNRNYYSIVINCKKTPLESQMLLNFNKNRWTKDLHLQDFVER QKENNDLVREIRDLCEKYNQSIKQEMTCKPEELVVANVGKLDAKKHIENSVNTLLSNNTL NVFSTMLAIEML
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA11850.fa Sequence name : TA11850 Sequence length : 312 VALUES OF COMPUTED PARAMETERS Coef20 : 3.798 CoefTot : -1.462 ChDiff : -1 ZoneTo : 28 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.559 0.055 0.504 MesoH : -0.467 0.352 -0.372 0.222 MuHd_075 : 23.677 13.935 6.962 6.145 MuHd_095 : 27.113 18.496 6.086 5.879 MuHd_100 : 37.416 23.622 7.980 7.317 MuHd_105 : 45.284 27.636 11.226 8.809 Hmax_075 : 12.700 5.700 1.944 4.500 Hmax_095 : 18.900 12.900 2.081 5.640 Hmax_100 : 21.300 15.200 1.256 5.800 Hmax_105 : 19.100 12.367 1.511 5.238 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8492 0.1508 DFMC : 0.8779 0.1221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 312 TA11850 MGDSTRSFQGLFNSFGGMRNMQNFGPLADTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGDFIDDYTIRVVDVFSMPQ 80 SGNSVSVEAVDPVYQTEMKDQLKRTGRPEVVVGWYHSHPGFGCWFSGTDVNTQQSFEQLNPRAVGVVIDPIQSVKGKVVI 160 DCFRLISPHLIMLGHEPRQTTSNIGHLQKPTIIALVHGLNRNYYSIVINCKKTPLESQMLLNFNKNRWTKDLHLQDFVER 240 QKENNDLVREIRDLCEKYNQSIKQEMTCKPEELVVANVGKLDAKKHIENSVNTLLSNNTLNVFSTMLAIEML 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA11850 6 -MGDSTR|SF 0.143 . TA11850 19 NSFGGMR|NM 0.078 . TA11850 43 SSLALLK|ML 0.068 . TA11850 46 ALLKMLK|HG 0.067 . TA11850 49 KMLKHGR|AG 0.102 . TA11850 71 IDDYTIR|VV 0.091 . TA11850 99 VYQTEMK|DQ 0.060 . TA11850 103 EMKDQLK|RT 0.068 . TA11850 104 MKDQLKR|TG 0.152 . TA11850 107 QLKRTGR|PE 0.218 . TA11850 142 FEQLNPR|AV 0.164 . TA11850 155 DPIQSVK|GK 0.062 . TA11850 157 IQSVKGK|VV 0.119 . TA11850 164 VVIDCFR|LI 0.101 . TA11850 178 MLGHEPR|QT 0.118 . TA11850 189 NIGHLQK|PT 0.077 . TA11850 201 LVHGLNR|NY 0.082 . TA11850 211 SIVINCK|KT 0.059 . TA11850 212 IVINCKK|TP 0.079 . TA11850 225 MLLNFNK|NR 0.061 . TA11850 227 LNFNKNR|WT 0.116 . TA11850 230 NKNRWTK|DL 0.256 . TA11850 240 LQDFVER|QK 0.082 . TA11850 242 DFVERQK|EN 0.058 . TA11850 249 ENNDLVR|EI 0.098 . TA11850 252 DLVREIR|DL 0.355 . TA11850 257 IRDLCEK|YN 0.064 . TA11850 263 KYNQSIK|QE 0.066 . TA11850 269 KQEMTCK|PE 0.066 . TA11850 280 VVANVGK|LD 0.063 . TA11850 284 VGKLDAK|KH 0.058 . TA11850 285 GKLDAKK|HI 0.136 . ____________________________^_________________

  • Fasta :-

    >TA11850 ATGGGAGATTCCACTAGATCGTTCCAGGGCCTTTTCAATTCCTTTGGAGGAATGCGAAAT ATGCAAAATTTTGGTCCTTTGGCTGACACTTCCGAGCAAGTTTACATTTCTTCTCTTGCT TTACTTAAAATGTTGAAACACGGAAGGGCTGGAGTTCCTATGGAAGTAATGGGTTTGATG CTTGGTGATTTTATAGATGATTATACGATCAGAGTAGTTGACGTTTTTTCAATGCCACAA TCAGGCAACAGTGTCAGCGTTGAGGCTGTTGACCCAGTCTACCAAACAGAAATGAAGGAC CAACTTAAAAGAACAGGACGTCCAGAAGTGGTTGTTGGATGGTACCACTCACATCCAGGC TTTGGATGTTGGTTTTCAGGAACTGATGTGAATACTCAGCAGAGTTTTGAGCAGCTAAAT CCACGAGCGGTGGGAGTTGTTATTGATCCCATCCAATCTGTTAAAGGCAAAGTGGTTATT GATTGTTTCAGACTCATTTCTCCACATCTGATTATGCTAGGGCACGAACCAAGGCAGACT ACCAGTAATATTGGTCATTTACAGAAGCCGACGATTATCGCCCTGGTCCACGGCTTGAAC CGCAACTACTACAGCATCGTAATAAACTGTAAAAAGACTCCACTCGAAAGCCAAATGCTC TTAAACTTTAACAAGAACAGATGGACCAAAGATTTACATTTACAGGACTTTGTGGAGAGG CAAAAGGAGAACAATGATTTAGTGCGCGAAATAAGAGATTTGTGTGAAAAATATAACCAG AGCATAAAGCAGGAGATGACATGTAAGCCCGAGGAACTGGTCGTCGCAAATGTAGGAAAA CTAGACGCCAAAAAACATATCGAAAACAGTGTCAACACTCTGCTCTCAAATAACACACTA AACGTTTTCAGCACAATGCTCGCAATTGAAATGTTGTAA
  • Download Fasta

  • Fasta :-

    MGDSTRSFQGLFNSFGGMRNMQNFGPLADTSEQVYISSLALLKMLKHGRAGVPMEVMGLM LGDFIDDYTIRVVDVFSMPQSGNSVSVEAVDPVYQTEMKDQLKRTGRPEVVVGWYHSHPG FGCWFSGTDVNTQQSFEQLNPRAVGVVIDPIQSVKGKVVIDCFRLISPHLIMLGHEPRQT TSNIGHLQKPTIIALVHGLNRNYYSIVINCKKTPLESQMLLNFNKNRWTKDLHLQDFVER QKENNDLVREIRDLCEKYNQSIKQEMTCKPEELVVANVGKLDAKKHIENSVNTLLSNNTL NVFSTMLAIEML

  • title: MPN+ (JAMM) motif
  • coordinates: E55,H116,H118,S126,D129
No Results
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TA11850      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India