TA13475 | hypothetical protein, conserved

_IDPredictionOTHERSPmTPCS_Position
TA13475OTHER0.9996970.0000940.000209
No Results

  • Fasta :-

    >TA13475 MNSSSGCLFKIKWTNFLGHKVPYLLQNNDGECPLICFVNVLLLRRRLELSKDLNVISFKS LCSYISSLLPHASPEWVASVLDTLRGGLLFNCKFDSTRAFIDSDPEQLFLSFDIPIKHGW IPDPIVYGPITNLNYDQLLEMLAVFQSEQECSSFGESKLESSLEDSKLDDKTEKNLEDDD KVGNNLENEHEEDSKLDEETKLEQDLKNLKLTNTDEEGKTEPVVEEQLNNVKSEVDEEKV NNTTEEKKEDKGGNKSELDDYVANLAMEFLETYATQITEYGMRVLKEEIPEGSLVALYRN NHFLVATCNKGQLFTLVTDSAFYEHRCVWESLENCEYFDENFQHYVQTSREVKPKKVKFI DKVKRVFRRKQRN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA13475.fa Sequence name : TA13475 Sequence length : 373 VALUES OF COMPUTED PARAMETERS Coef20 : 3.881 CoefTot : -1.355 ChDiff : -24 ZoneTo : 28 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.847 1.235 0.084 0.459 MesoH : -0.465 0.516 -0.301 0.242 MuHd_075 : 22.331 20.111 8.409 5.283 MuHd_095 : 27.924 20.297 9.811 5.488 MuHd_100 : 25.593 21.521 9.541 5.573 MuHd_105 : 21.621 21.838 9.298 4.934 Hmax_075 : 8.200 16.217 1.811 5.612 Hmax_095 : 12.100 10.500 0.718 4.660 Hmax_100 : 9.300 11.700 1.027 4.380 Hmax_105 : 16.300 19.000 3.638 6.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8313 0.1687 DFMC : 0.7915 0.2085
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 373 TA13475 MNSSSGCLFKIKWTNFLGHKVPYLLQNNDGECPLICFVNVLLLRRRLELSKDLNVISFKSLCSYISSLLPHASPEWVASV 80 LDTLRGGLLFNCKFDSTRAFIDSDPEQLFLSFDIPIKHGWIPDPIVYGPITNLNYDQLLEMLAVFQSEQECSSFGESKLE 160 SSLEDSKLDDKTEKNLEDDDKVGNNLENEHEEDSKLDEETKLEQDLKNLKLTNTDEEGKTEPVVEEQLNNVKSEVDEEKV 240 NNTTEEKKEDKGGNKSELDDYVANLAMEFLETYATQITEYGMRVLKEEIPEGSLVALYRNNHFLVATCNKGQLFTLVTDS 320 AFYEHRCVWESLENCEYFDENFQHYVQTSREVKPKKVKFIDKVKRVFRRKQRN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA13475 10 SSGCLFK|IK 0.075 . TA13475 12 GCLFKIK|WT 0.070 . TA13475 20 TNFLGHK|VP 0.054 . TA13475 44 VNVLLLR|RR 0.059 . TA13475 45 NVLLLRR|RL 0.083 . TA13475 46 VLLLRRR|LE 0.076 . TA13475 51 RRLELSK|DL 0.068 . TA13475 59 LNVISFK|SL 0.092 . TA13475 85 SVLDTLR|GG 0.062 . TA13475 93 GLLFNCK|FD 0.062 . TA13475 98 CKFDSTR|AF 0.101 . TA13475 117 SFDIPIK|HG 0.058 . TA13475 158 SSFGESK|LE 0.071 . TA13475 167 SSLEDSK|LD 0.059 . TA13475 171 DSKLDDK|TE 0.054 . TA13475 174 LDDKTEK|NL 0.068 . TA13475 181 NLEDDDK|VG 0.062 . TA13475 195 EHEEDSK|LD 0.059 . TA13475 201 KLDEETK|LE 0.057 . TA13475 207 KLEQDLK|NL 0.059 . TA13475 210 QDLKNLK|LT 0.060 . TA13475 219 NTDEEGK|TE 0.059 . TA13475 232 EQLNNVK|SE 0.067 . TA13475 239 SEVDEEK|VN 0.064 . TA13475 247 NNTTEEK|KE 0.062 . TA13475 248 NTTEEKK|ED 0.089 . TA13475 251 EEKKEDK|GG 0.069 . TA13475 255 EDKGGNK|SE 0.064 . TA13475 283 ITEYGMR|VL 0.082 . TA13475 286 YGMRVLK|EE 0.111 . TA13475 299 SLVALYR|NN 0.103 . TA13475 310 LVATCNK|GQ 0.060 . TA13475 326 SAFYEHR|CV 0.154 . TA13475 350 HYVQTSR|EV 0.098 . TA13475 353 QTSREVK|PK 0.140 . TA13475 355 SREVKPK|KV 0.106 . TA13475 356 REVKPKK|VK 0.084 . TA13475 358 VKPKKVK|FI 0.091 . TA13475 362 KVKFIDK|VK 0.059 . TA13475 364 KFIDKVK|RV 0.065 . TA13475 365 FIDKVKR|VF 0.179 . TA13475 368 KVKRVFR|RK 0.213 . TA13475 369 VKRVFRR|KQ 0.176 . TA13475 370 KRVFRRK|QR 0.089 . TA13475 372 VFRRKQR|N- 0.275 . ____________________________^_________________

  • Fasta :-

    >TA13475 ATGAACAGTTCTTCTGGATGTCTTTTTAAAATAAAGTGGACGAACTTCCTGGGCCATAAA GTGCCGTATCTTCTGCAGAACAATGACGGAGAGTGCCCACTAATCTGTTTCGTCAATGTG TTGCTGTTGAGGCGAAGGTTGGAACTGTCTAAAGACCTTAACGTTATTTCATTTAAGAGC CTTTGCTCCTACATTTCATCACTACTTCCACACGCTAGTCCCGAATGGGTAGCATCAGTA TTAGATACCCTAAGGGGTGGGCTTTTGTTTAACTGCAAGTTTGATTCTACCAGGGCGTTT ATAGATTCCGATCCAGAGCAGTTATTTCTATCTTTCGACATTCCAATTAAGCACGGATGG ATTCCAGACCCTATAGTTTACGGACCTATAACTAACTTGAATTATGACCAACTCCTAGAA ATGCTCGCAGTTTTTCAAAGCGAGCAGGAATGTTCCAGTTTTGGGGAATCTAAACTTGAA TCTAGTCTTGAAGATTCTAAACTTGATGATAAAACAGAGAAGAATCTAGAAGATGATGAT AAAGTAGGGAATAATCTAGAAAATGAACATGAAGAAGATTCCAAGTTAGATGAAGAAACT AAATTAGAGCAAGATTTAAAAAATTTGAAACTCACAAATACAGATGAGGAAGGTAAAACG GAACCAGTTGTAGAGGAACAGTTGAATAATGTAAAATCTGAAGTAGATGAAGAAAAGGTA AATAATACGACAGAGGAGAAAAAAGAAGATAAGGGTGGGAATAAATCAGAGTTAGATGAT TATGTAGCTAATTTAGCCATGGAATTCTTGGAAACATACGCTACCCAGATCACAGAGTAT GGAATGAGAGTGTTAAAAGAGGAAATTCCAGAGGGTTCGCTGGTGGCGCTCTATCGCAAC AACCATTTTCTAGTAGCAACATGTAATAAAGGACAATTATTCACACTGGTAACAGACTCG GCGTTCTATGAGCATCGATGCGTCTGGGAATCACTGGAGAACTGTGAGTATTTCGACGAA AATTTTCAACATTACGTCCAAACTTCAAGAGAAGTGAAACCCAAAAAGGTCAAATTCATT GATAAAGTTAAAAGAGTATTCAGAAGAAAACAAAGGAATTAA
  • Download Fasta

  • Fasta :-

    MNSSSGCLFKIKWTNFLGHKVPYLLQNNDGECPLICFVNVLLLRRRLELSKDLNVISFKS LCSYISSLLPHASPEWVASVLDTLRGGLLFNCKFDSTRAFIDSDPEQLFLSFDIPIKHGW IPDPIVYGPITNLNYDQLLEMLAVFQSEQECSSFGESKLESSLEDSKLDDKTEKNLEDDD KVGNNLENEHEEDSKLDEETKLEQDLKNLKLTNTDEEGKTEPVVEEQLNNVKSEVDEEKV NNTTEEKKEDKGGNKSELDDYVANLAMEFLETYATQITEYGMRVLKEEIPEGSLVALYRN NHFLVATCNKGQLFTLVTDSAFYEHRCVWESLENCEYFDENFQHYVQTSREVKPKKVKFI DKVKRVFRRKQRN

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA13475194 SHEEDSKLDE0.993unspTA13475194 SHEEDSKLDE0.993unspTA13475194 SHEEDSKLDE0.993unspTA13475348 THYVQTSREV0.995unspTA13475162 SKLESSLEDS0.998unspTA13475166 SSLEDSKLDD0.994unsp

TA13475      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India