TA13550 | autophagy-related peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
TA13550OTHER0.9989000.0000810.001018
No Results

  • Fasta :-

    >TA13550 MSNVVRENVNVLYNKRLESRFGILFTYRYGLEYKFPRPINFKRRRLFNIFSPLNLSNGIV TIDSDKGWGCVLRSTQMAISQALLNLVLGPEFSVEQLEIRNRTPRNRKIDQSLLNIDTFE KLLNGLLDLDGVSAVSVILAQFYDDLNAVFSIYNFVIADYVLKTCTKFLHFGPTSAALCA SKIINDLNLPINSIAFPDGVFHISDVREILEEKRNLLVWVSNKKKLDRIERECVRSMFRL SQFNGIIGGNLFNKSYYIFGTTNKRLYYNDPHLYCKKAFRSLEYVDIFRDFTSRRVKSMN WRYFNASFTLLFLFKDRDDFQDFLENTFERKSIVESFPFEFITYGDLTFN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA13550.fa Sequence name : TA13550 Sequence length : 350 VALUES OF COMPUTED PARAMETERS Coef20 : 4.303 CoefTot : 0.113 ChDiff : 9 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.541 0.050 0.578 MesoH : 0.055 0.827 -0.181 0.370 MuHd_075 : 13.977 4.204 2.474 4.396 MuHd_095 : 30.611 23.205 9.684 5.454 MuHd_100 : 20.900 17.501 6.973 3.711 MuHd_105 : 15.089 12.914 3.582 4.338 Hmax_075 : -6.883 5.017 -3.095 2.380 Hmax_095 : 1.575 10.300 -0.376 2.293 Hmax_100 : 0.400 10.900 -1.053 2.760 Hmax_105 : -1.600 5.900 -2.902 1.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6785 0.3215 DFMC : 0.8247 0.1753
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 350 TA13550 MSNVVRENVNVLYNKRLESRFGILFTYRYGLEYKFPRPINFKRRRLFNIFSPLNLSNGIVTIDSDKGWGCVLRSTQMAIS 80 QALLNLVLGPEFSVEQLEIRNRTPRNRKIDQSLLNIDTFEKLLNGLLDLDGVSAVSVILAQFYDDLNAVFSIYNFVIADY 160 VLKTCTKFLHFGPTSAALCASKIINDLNLPINSIAFPDGVFHISDVREILEEKRNLLVWVSNKKKLDRIERECVRSMFRL 240 SQFNGIIGGNLFNKSYYIFGTTNKRLYYNDPHLYCKKAFRSLEYVDIFRDFTSRRVKSMNWRYFNASFTLLFLFKDRDDF 320 QDFLENTFERKSIVESFPFEFITYGDLTFN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA13550 6 -MSNVVR|EN 0.102 . TA13550 15 VNVLYNK|RL 0.062 . TA13550 16 NVLYNKR|LE 0.105 . TA13550 20 NKRLESR|FG 0.077 . TA13550 28 GILFTYR|YG 0.073 . TA13550 34 RYGLEYK|FP 0.064 . TA13550 37 LEYKFPR|PI 0.107 . TA13550 42 PRPINFK|RR 0.054 . TA13550 43 RPINFKR|RR 0.148 . TA13550 44 PINFKRR|RL 0.189 . TA13550 45 INFKRRR|LF 0.118 . TA13550 66 VTIDSDK|GW 0.078 . TA13550 73 GWGCVLR|ST 0.176 . TA13550 100 VEQLEIR|NR 0.070 . TA13550 102 QLEIRNR|TP 0.068 . TA13550 105 IRNRTPR|NR 0.294 . TA13550 107 NRTPRNR|KI 0.145 . TA13550 108 RTPRNRK|ID 0.137 . TA13550 121 NIDTFEK|LL 0.058 . TA13550 163 IADYVLK|TC 0.061 . TA13550 167 VLKTCTK|FL 0.072 . TA13550 182 AALCASK|II 0.059 . TA13550 207 FHISDVR|EI 0.070 . TA13550 213 REILEEK|RN 0.053 . TA13550 214 EILEEKR|NL 0.102 . TA13550 223 LVWVSNK|KK 0.058 . TA13550 224 VWVSNKK|KL 0.100 . TA13550 225 WVSNKKK|LD 0.113 . TA13550 228 NKKKLDR|IE 0.095 . TA13550 231 KLDRIER|EC 0.185 . TA13550 235 IERECVR|SM 0.090 . TA13550 239 CVRSMFR|LS 0.072 . TA13550 254 GGNLFNK|SY 0.099 . TA13550 264 IFGTTNK|RL 0.059 . TA13550 265 FGTTNKR|LY 0.096 . TA13550 276 DPHLYCK|KA 0.079 . TA13550 277 PHLYCKK|AF 0.086 . TA13550 280 YCKKAFR|SL 0.151 . TA13550 289 EYVDIFR|DF 0.078 . TA13550 294 FRDFTSR|RV 0.093 . TA13550 295 RDFTSRR|VK 0.149 . TA13550 297 FTSRRVK|SM 0.198 . TA13550 302 VKSMNWR|YF 0.144 . TA13550 315 TLLFLFK|DR 0.078 . TA13550 317 LFLFKDR|DD 0.095 . TA13550 330 LENTFER|KS 0.089 . TA13550 331 ENTFERK|SI 0.123 . ____________________________^_________________

  • Fasta :-

    >TA13550 ATGAGTAATGTAGTAAGAGAAAATGTTAATGTATTATATAATAAAAGATTGGAATCCAGG TTTGGAATCCTGTTTACATACAGATATGGCCTTGAATACAAATTTCCGAGGCCAATAAAC TTTAAAAGGAGAAGACTCTTTAATATTTTTAGCCCTTTGAATCTCTCAAATGGCATTGTA ACCATTGACTCAGATAAAGGTTGGGGATGCGTCTTAAGATCGACACAGATGGCCATATCT CAAGCTCTTTTGAACCTAGTTCTGGGACCTGAATTTAGTGTGGAGCAGCTTGAAATCAGG AATAGAACCCCAAGGAACAGGAAAATTGACCAAAGCTTACTTAACATTGATACTTTCGAG AAGTTGCTTAACGGATTACTTGATTTGGACGGTGTTTCAGCTGTTTCAGTGATATTAGCT CAGTTTTACGATGATTTGAATGCAGTTTTCTCAATTTACAACTTCGTAATAGCAGACTAT GTTCTAAAAACATGTACTAAATTTCTACATTTTGGACCAACCAGCGCAGCACTCTGCGCC TCTAAAATCATAAATGATTTAAATCTCCCAATTAACTCAATAGCTTTCCCCGACGGTGTT TTTCACATCTCTGACGTGCGTGAAATATTGGAAGAGAAGAGAAATTTGCTCGTTTGGGTC TCGAATAAGAAAAAGTTGGACCGCATTGAACGCGAATGTGTGAGGTCAATGTTCAGACTA AGTCAGTTCAACGGAATTATTGGAGGGAACCTGTTCAATAAGTCCTACTATATATTTGGT ACAACTAATAAAAGACTATACTATAATGACCCTCATCTATACTGCAAAAAGGCGTTTAGG AGCCTGGAATATGTAGATATATTTCGAGATTTCACGAGTAGGAGAGTCAAGAGCATGAAC TGGCGTTATTTTAACGCATCATTCACTCTTTTATTCTTGTTTAAGGACCGGGACGATTTT CAGGATTTTCTGGAAAACACTTTTGAGAGGAAATCAATCGTGGAATCATTCCCATTTGAA TTTATAACTTACGGAGACCTCACATTTAACTAG
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  • Fasta :-

    MSNVVRENVNVLYNKRLESRFGILFTYRYGLEYKFPRPINFKRRRLFNIFSPLNLSNGIV TIDSDKGWGCVLRSTQMAISQALLNLVLGPEFSVEQLEIRNRTPRNRKIDQSLLNIDTFE KLLNGLLDLDGVSAVSVILAQFYDDLNAVFSIYNFVIADYVLKTCTKFLHFGPTSAALCA SKIINDLNLPINSIAFPDGVFHISDVREILEEKRNLLVWVSNKKKLDRIERECVRSMFRL SQFNGIIGGNLFNKSYYIFGTTNKRLYYNDPHLYCKKAFRSLEYVDIFRDFTSRRVKSMN WRYFNASFTLLFLFKDRDDFQDFLENTFERKSIVESFPFEFITYGDLTFN

    No Results
No Results
No Results
IDSitePeptideScoreMethod
TA13550332 SFERKSIVES0.997unsp

TA13550      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India